BLASTX nr result

ID: Cimicifuga21_contig00001741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001741
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46772.1| RUB1-conjugating enzyme-like protein [Solanum tub...   346   5e-93
gb|ABI96209.1| ubiquitin-conjugating enzyme [Capsicum annuum]         345   8e-93
gb|ABR16875.1| unknown [Picea sitchensis]                             345   1e-92
ref|XP_002525098.1| ubiquitin-conjugating enzyme m, putative [Ri...   344   2e-92
gb|ABR17199.1| unknown [Picea sitchensis]                             343   3e-92

>gb|ABA46772.1| RUB1-conjugating enzyme-like protein [Solanum tuberosum]
           gi|82623385|gb|ABB87107.1| RUB1 conjugating enzyme-like
           [Solanum tuberosum]
          Length = 183

 Score =  346 bits (888), Expect = 5e-93
 Identities = 162/183 (88%), Positives = 172/183 (93%)
 Frame = +1

Query: 106 MIKLFKVKEKQRENAANANGKAPVKKQSAGELRLHKDISELNLPKTTTIAFPNGKDDLMN 285
           MIKLFKVKEKQRE A NANGK PVKKQS GELRLHKDISELNLPKT +I+FPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREQAENANGKPPVKKQSPGELRLHKDISELNLPKTCSISFPNGKDDLMN 60

Query: 286 FEVSLRPDEGYYNGGMFVFTFHVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 465
           FEV++RPDEGYY GG F F+F +SPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYMGGTFTFSFSISPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 466 KPVLNINTIVYGLHHLFTEPNHEDPLNHDAAAVLRDNPKTFESNVRRAMVGGYVGQTYFT 645
           KPVLNINTI+YGL+HLFTEPNHEDPLNHDAAAVLRDNPK FESNVRRAM GGYVGQT+FT
Sbjct: 121 KPVLNINTIIYGLYHLFTEPNHEDPLNHDAAAVLRDNPKMFESNVRRAMHGGYVGQTFFT 180

Query: 646 RCI 654
           RC+
Sbjct: 181 RCM 183


>gb|ABI96209.1| ubiquitin-conjugating enzyme [Capsicum annuum]
          Length = 183

 Score =  345 bits (886), Expect = 8e-93
 Identities = 161/183 (87%), Positives = 172/183 (93%)
 Frame = +1

Query: 106 MIKLFKVKEKQRENAANANGKAPVKKQSAGELRLHKDISELNLPKTTTIAFPNGKDDLMN 285
           MIKLFKVKEKQRE A N NGK PVKKQSAGELRLHKDISELNLPKT +I+FPNGKD+LMN
Sbjct: 1   MIKLFKVKEKQREQAENENGKPPVKKQSAGELRLHKDISELNLPKTCSISFPNGKDNLMN 60

Query: 286 FEVSLRPDEGYYNGGMFVFTFHVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 465
           FEV++RPDEGYY GG F F+F +SP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYTGGTFTFSFSISPMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 466 KPVLNINTIVYGLHHLFTEPNHEDPLNHDAAAVLRDNPKTFESNVRRAMVGGYVGQTYFT 645
           KPVLNINTI+YGL+HLFTEPNHEDPLNHDAAAVLRDNPK FESNVRRAM GGYVGQTYFT
Sbjct: 121 KPVLNINTIIYGLYHLFTEPNHEDPLNHDAAAVLRDNPKMFESNVRRAMHGGYVGQTYFT 180

Query: 646 RCI 654
           RC+
Sbjct: 181 RCM 183


>gb|ABR16875.1| unknown [Picea sitchensis]
          Length = 183

 Score =  345 bits (885), Expect = 1e-92
 Identities = 161/183 (87%), Positives = 174/183 (95%)
 Frame = +1

Query: 106 MIKLFKVKEKQRENAANANGKAPVKKQSAGELRLHKDISELNLPKTTTIAFPNGKDDLMN 285
           MIKLFKVKEKQRE AA+ANG+APVKKQSAGELRLHKDISELNLPKTT+I+FPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREAAASANGRAPVKKQSAGELRLHKDISELNLPKTTSISFPNGKDDLMN 60

Query: 286 FEVSLRPDEGYYNGGMFVFTFHVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 465
           FEV++RPDEGYY GG F FTF VSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYVGGSFTFTFSVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 466 KPVLNINTIVYGLHHLFTEPNHEDPLNHDAAAVLRDNPKTFESNVRRAMVGGYVGQTYFT 645
           KPVLNINTI+YGL+HLF+ PNHEDPLNHDAAAVLRDNP+ FE+NVRRAM GGYVG +YF+
Sbjct: 121 KPVLNINTIIYGLNHLFSHPNHEDPLNHDAAAVLRDNPRAFETNVRRAMAGGYVGSSYFS 180

Query: 646 RCI 654
           RCI
Sbjct: 181 RCI 183


>ref|XP_002525098.1| ubiquitin-conjugating enzyme m, putative [Ricinus communis]
           gi|223535557|gb|EEF37225.1| ubiquitin-conjugating enzyme
           m, putative [Ricinus communis]
          Length = 183

 Score =  344 bits (883), Expect = 2e-92
 Identities = 161/183 (87%), Positives = 173/183 (94%)
 Frame = +1

Query: 106 MIKLFKVKEKQRENAANANGKAPVKKQSAGELRLHKDISELNLPKTTTIAFPNGKDDLMN 285
           MI+LFKVKEKQRE A NANG AP+KKQ+AGELRLHKDISELNLPK+ TI+FPNGKDDLMN
Sbjct: 1   MIRLFKVKEKQREQAENANGGAPIKKQTAGELRLHKDISELNLPKSCTISFPNGKDDLMN 60

Query: 286 FEVSLRPDEGYYNGGMFVFTFHVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 465
           FEVS+RPDEGYY GG F+F+F VSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 466 KPVLNINTIVYGLHHLFTEPNHEDPLNHDAAAVLRDNPKTFESNVRRAMVGGYVGQTYFT 645
           KPVLNINTI+YGL+HLFTEPN+EDPLNHDAAAVLRDNPK FESNVRRAM GGYVGQT+F 
Sbjct: 121 KPVLNINTIIYGLYHLFTEPNYEDPLNHDAAAVLRDNPKMFESNVRRAMAGGYVGQTFFP 180

Query: 646 RCI 654
           RCI
Sbjct: 181 RCI 183


>gb|ABR17199.1| unknown [Picea sitchensis]
          Length = 183

 Score =  343 bits (881), Expect = 3e-92
 Identities = 160/183 (87%), Positives = 173/183 (94%)
 Frame = +1

Query: 106 MIKLFKVKEKQRENAANANGKAPVKKQSAGELRLHKDISELNLPKTTTIAFPNGKDDLMN 285
           MIKLFKVKEKQRE AA+ANG+APVKKQSAGELRLHKDISELNLPKTT+I+FPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQREAAASANGRAPVKKQSAGELRLHKDISELNLPKTTSISFPNGKDDLMN 60

Query: 286 FEVSLRPDEGYYNGGMFVFTFHVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 465
           FEV++RPDEGYY GG F FTF VSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYVGGSFTFTFSVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 466 KPVLNINTIVYGLHHLFTEPNHEDPLNHDAAAVLRDNPKTFESNVRRAMVGGYVGQTYFT 645
           KPVLNINTI+YGL+HLF+ PNHEDPLNHDAAAV RDNP+ FE+NVRRAM GGYVG +YF+
Sbjct: 121 KPVLNINTIIYGLNHLFSHPNHEDPLNHDAAAVFRDNPRAFETNVRRAMAGGYVGSSYFS 180

Query: 646 RCI 654
           RCI
Sbjct: 181 RCI 183


Top