BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001724
         (2218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001140348.1| uncharacterized protein LOC100272396 [Zea ma...   511   e-178
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...   525   e-178
ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like...   524   e-177
ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinu...   523   e-177
ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like...   526   e-177

>ref|NP_001140348.1| uncharacterized protein LOC100272396 [Zea mays]
            gi|194699108|gb|ACF83638.1| unknown [Zea mays]
            gi|413935104|gb|AFW69655.1| hypothetical protein
            ZEAMMB73_774251 [Zea mays]
          Length = 583

 Score =  511 bits (1317), Expect(2) = e-178
 Identities = 262/355 (73%), Positives = 287/355 (80%), Gaps = 4/355 (1%)
 Frame = -2

Query: 1368 FFRGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 1189
            F +GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ
Sbjct: 212  FLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 271

Query: 1188 VLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLI 1009
            VLHDAFFKYQTKPKL++HGDLYYEGKEFEVKLREMKPGMLSRELK+ALGMP+GAPPPWLI
Sbjct: 272  VLHDAFFKYQTKPKLSSHGDLYYEGKEFEVKLREMKPGMLSRELKDALGMPDGAPPPWLI 331

Query: 1008 NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGXXXXXX 829
            NMQRYGPPPSYP LKIPGLNAPIPPGASFGY PG WGKPPVDE GRPLYGDVFG      
Sbjct: 332  NMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGKPPVDEHGRPLYGDVFGVLQQDE 391

Query: 828  XXXXXEPVDRSKHWGDL---XXXXXXXXXXXXXXXXXXXEDGIQSVDSLSSTPTGVETPD 658
                 EPVDRSKHWGDL                      EDGIQSVD++SSTPTGVETPD
Sbjct: 392  PNYDDEPVDRSKHWGDLEEEEEEEEEEEEEEEPMEDEEMEDGIQSVDTISSTPTGVETPD 451

Query: 657  VIDLRKQQRKDPEK-PEKPLYQVLEEKEEKIAPGTILGTTHTYVVGGAQDKAAAAKRVDL 481
            VIDLRK QRK+ +K  E+PLYQVLE+KEE+IAPGT+ G++HTYV+ G QDK++A KRVDL
Sbjct: 452  VIDLRKLQRKETDKQAERPLYQVLEQKEERIAPGTLYGSSHTYVL-GTQDKSSAPKRVDL 510

Query: 480  LRGQKADKVDVTLKPEDLEGVENLDNVLXXXXXXXXXXXXXXXXXEDFSDMVAEN 316
            L+ QK+DKVDVT++PE+LE    +D+VL                 EDFSDMVAEN
Sbjct: 511  LKNQKSDKVDVTIQPEELEA---MDDVLAAKYEEAREEEKLRNQKEDFSDMVAEN 562



 Score =  141 bits (355), Expect(2) = e-178
 Identities = 81/172 (47%), Positives = 100/172 (58%), Gaps = 7/172 (4%)
 Frame = -1

Query: 1942 SISKTNSDDSD------DAQENSDPQ-QPLEKIEIEYVPETADLEDNXXXXXXXXXXXXX 1784
            S+++ ++ D+D      DA+EN+DP  +P  ++EIEYVPE A+L+D              
Sbjct: 44   SVTEADAQDADGGASSSDAKENADPNPEPQVEVEIEYVPEKAELDDPLLDDFKAIFEKFT 103

Query: 1783 XXXXXXAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGGVSNKKKKLQRRMK 1604
                  A                                    + GG+SNKKKKL+RRMK
Sbjct: 104  FKDAAAAAAEDDKKDEGAADATKKGSLDDDDDDEDDEQEANKKKDGGLSNKKKKLERRMK 163

Query: 1603 IAQLKQISSRPDVVEVWDATAADPKLLVYLKSYRNSVPVPRHWSQKRKFLQG 1448
            IA LKQI +RPDVVEVWDATAADPKLLVYLK+YRN+VPVPRHWSQKRKFLQG
Sbjct: 164  IADLKQICNRPDVVEVWDATAADPKLLVYLKAYRNTVPVPRHWSQKRKFLQG 215


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
            gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
            factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score =  525 bits (1351), Expect(2) = e-178
 Identities = 271/354 (76%), Positives = 289/354 (81%), Gaps = 3/354 (0%)
 Frame = -2

Query: 1368 FFRGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 1189
            F +GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ
Sbjct: 212  FLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 271

Query: 1188 VLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLI 1009
            VLHDAFFKYQTKPKLTT GDLYYEGKEFEVKLREMKPGMLS+ELKEALGMPEGAPPPWLI
Sbjct: 272  VLHDAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLI 331

Query: 1008 NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGXXXXXX 829
            NMQRYGPPPSYP LKIPGLNAPIPPGASFGYHPGGWGKPPVDE+GRPLYGDVFG      
Sbjct: 332  NMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQ 391

Query: 828  XXXXXEPVDRSKHWGDL--XXXXXXXXXXXXXXXXXXXEDGIQSVDSLSSTPTGVETPDV 655
                 EPVD++KHWGDL                     EDGI+SVDS SSTPTGVETPDV
Sbjct: 392  ANYEEEPVDKTKHWGDLEEEEEEEVEEEDEEELEEEEMEDGIESVDSQSSTPTGVETPDV 451

Query: 654  IDLRKQQRKDPEKPEKPLYQVLEEKEEKIAPGTILGTTHTYVV-GGAQDKAAAAKRVDLL 478
            IDLRKQQRK+   P++PLYQVLEEKEE++APGT+LGT+HTYV+ GG QDK   AKRVDLL
Sbjct: 452  IDLRKQQRKE---PDRPLYQVLEEKEERVAPGTLLGTSHTYVISGGTQDK-TGAKRVDLL 507

Query: 477  RGQKADKVDVTLKPEDLEGVENLDNVLXXXXXXXXXXXXXXXXXEDFSDMVAEN 316
            RGQK+DKVDVTL+PE+LE +E   NVL                 EDFSDMVAEN
Sbjct: 508  RGQKSDKVDVTLRPEELEAME---NVLPAKYEEAREEEKLRSQREDFSDMVAEN 558



 Score =  127 bits (320), Expect(2) = e-178
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = -1

Query: 1645 GVSNKKKKLQRRMKIAQLKQISSRPDVVEVWDATAADPKLLVYLKSYRNSVPVPRHWSQK 1466
            G+SNKKKKLQRRMKIA+LKQI SRPDVVE+WDATAADPKLLVYLKSYRN+VPVPRHW QK
Sbjct: 150  GLSNKKKKLQRRMKIAELKQICSRPDVVEIWDATAADPKLLVYLKSYRNTVPVPRHWCQK 209

Query: 1465 RKFLQG 1448
            RKFLQG
Sbjct: 210  RKFLQG 215


>ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  524 bits (1350), Expect(2) = e-177
 Identities = 274/357 (76%), Positives = 289/357 (80%), Gaps = 6/357 (1%)
 Frame = -2

Query: 1368 FFRGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 1189
            F +GKRGIEK  FQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ
Sbjct: 204  FLQGKRGIEKPAFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 263

Query: 1188 VLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLI 1009
            VLHDAFFKYQTKPKLT+ GDLY+EGKEFEVKLREMKPGMLS+ELKEALGMPEGAPPPWLI
Sbjct: 264  VLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLI 323

Query: 1008 NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGXXXXXX 829
            NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDE+GRPLYGDVFG      
Sbjct: 324  NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQDQ 383

Query: 828  XXXXXEPVDRSKHWGDLXXXXXXXXXXXXXXXXXXXED-----GIQSVDSLSSTPTGVET 664
                 EPVD++KHWGDL                   E+     GIQSVDSLSSTPTGVET
Sbjct: 384  PNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEMEEEELEAGIQSVDSLSSTPTGVET 443

Query: 663  PDVIDLRKQQRKDPEKPEKPLYQVLEEKEEKIAPGTILGTTHTYVVG-GAQDKAAAAKRV 487
            PDVIDLRKQQRK+   PE+PLYQVLEEKEEKIAPGT+LGTTHTYVVG G QDK + AKRV
Sbjct: 444  PDVIDLRKQQRKE---PERPLYQVLEEKEEKIAPGTLLGTTHTYVVGTGTQDK-SGAKRV 499

Query: 486  DLLRGQKADKVDVTLKPEDLEGVENLDNVLXXXXXXXXXXXXXXXXXEDFSDMVAEN 316
            DLLRGQK DKVDVTL+PE+LE +E   NVL                 EDFSDMVAEN
Sbjct: 500  DLLRGQKTDKVDVTLQPEELEAME---NVLPAKYEEAREEEKLRSQREDFSDMVAEN 553



 Score =  127 bits (319), Expect(2) = e-177
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = -1

Query: 1645 GVSNKKKKLQRRMKIAQLKQISSRPDVVEVWDATAADPKLLVYLKSYRNSVPVPRHWSQK 1466
            G+SNKKKKLQRRMKIAQLKQI SRPDVVEVWDATA+DPKLLV+LKSYRN+VPVPRHW QK
Sbjct: 142  GISNKKKKLQRRMKIAQLKQICSRPDVVEVWDATASDPKLLVFLKSYRNTVPVPRHWCQK 201

Query: 1465 RKFLQG 1448
            RKFLQG
Sbjct: 202  RKFLQG 207


>ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinus communis]
            gi|223541688|gb|EEF43236.1| Splicing factor 3B subunit,
            putative [Ricinus communis]
          Length = 590

 Score =  523 bits (1348), Expect(2) = e-177
 Identities = 271/353 (76%), Positives = 287/353 (81%), Gaps = 2/353 (0%)
 Frame = -2

Query: 1368 FFRGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 1189
            F +GKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ
Sbjct: 223  FLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 282

Query: 1188 VLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLI 1009
            VLHDAFFKYQTKPKLTTHGDLY+EGKEFEVKLREMKPG LS+ELKE+LGMPEGAPPPWLI
Sbjct: 283  VLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGTLSQELKESLGMPEGAPPPWLI 342

Query: 1008 NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGXXXXXX 829
            NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDE+GRPLYGDVFG      
Sbjct: 343  NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVYQQEQ 402

Query: 828  XXXXXEPVDRSKHWGDL-XXXXXXXXXXXXXXXXXXXEDGIQSVDSLSSTPTGVETPDVI 652
                 EPVD++KHWGDL                    EDGIQSVDSLSSTPTGVETPDVI
Sbjct: 403  PNYEEEPVDKNKHWGDLEEEEEEEEEEEEEEIEEEDLEDGIQSVDSLSSTPTGVETPDVI 462

Query: 651  DLRKQQRKDPEKPEKPLYQVLEEKEEKIAPGTILGTTHTYVVG-GAQDKAAAAKRVDLLR 475
            DLRKQQRK+   PE+PLYQVLEEK E I  GT+LGTTHTYVVG G QDK +AAKRVDLLR
Sbjct: 463  DLRKQQRKE---PERPLYQVLEEKPEAIGAGTLLGTTHTYVVGTGTQDK-SAAKRVDLLR 518

Query: 474  GQKADKVDVTLKPEDLEGVENLDNVLXXXXXXXXXXXXXXXXXEDFSDMVAEN 316
            GQK D+VDVTL+PE+L+    +D VL                 EDFSDMVAEN
Sbjct: 519  GQKTDRVDVTLQPEELDA---MDEVLPGKYEEAREEEKLRSQREDFSDMVAEN 568



 Score =  127 bits (320), Expect(2) = e-177
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = -1

Query: 1651 RGGVSNKKKKLQRRMKIAQLKQISSRPDVVEVWDATAADPKLLVYLKSYRNSVPVPRHWS 1472
            +GG+SNKKKKL RRMKIA+LKQI SRPDVVEVWDATAADPKLLV+LKSYRN+VPVPRHW 
Sbjct: 159  KGGISNKKKKLLRRMKIAELKQICSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWC 218

Query: 1471 QKRKFLQG 1448
            QKRKFLQG
Sbjct: 219  QKRKFLQG 226


>ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  526 bits (1354), Expect(2) = e-177
 Identities = 274/357 (76%), Positives = 289/357 (80%), Gaps = 6/357 (1%)
 Frame = -2

Query: 1368 FFRGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 1189
            F +GKRGIEK PFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ
Sbjct: 204  FLQGKRGIEKPPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQ 263

Query: 1188 VLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSRELKEALGMPEGAPPPWLI 1009
            VLHDAFFKYQTKPKLT+ GDLY+EGKEFEVKLREMKPGMLS ELKEALGMPEG+PPPWLI
Sbjct: 264  VLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSHELKEALGMPEGSPPPWLI 323

Query: 1008 NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGXXXXXX 829
            NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDE+GRPLYGDVFG      
Sbjct: 324  NMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQDQ 383

Query: 828  XXXXXEPVDRSKHWGDLXXXXXXXXXXXXXXXXXXXED-----GIQSVDSLSSTPTGVET 664
                 EPVD++KHWGDL                   E+     GIQSVDSLSSTPTGVET
Sbjct: 384  PNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEMEEEELEAGIQSVDSLSSTPTGVET 443

Query: 663  PDVIDLRKQQRKDPEKPEKPLYQVLEEKEEKIAPGTILGTTHTYVVG-GAQDKAAAAKRV 487
            PDVIDLRKQQRK+   PE+PLYQVLEEKEEKIAPGT+LGTTHTYVVG G QDK + AKRV
Sbjct: 444  PDVIDLRKQQRKE---PERPLYQVLEEKEEKIAPGTLLGTTHTYVVGTGTQDK-SGAKRV 499

Query: 486  DLLRGQKADKVDVTLKPEDLEGVENLDNVLXXXXXXXXXXXXXXXXXEDFSDMVAEN 316
            DLLRGQK DKVDVTL+PE+LE +E   NVL                 EDFSDMVAEN
Sbjct: 500  DLLRGQKTDKVDVTLQPEELEAME---NVLPAKYEEAREEEKLRSQREDFSDMVAEN 553



 Score =  124 bits (310), Expect(2) = e-177
 Identities = 58/66 (87%), Positives = 63/66 (95%)
 Frame = -1

Query: 1645 GVSNKKKKLQRRMKIAQLKQISSRPDVVEVWDATAADPKLLVYLKSYRNSVPVPRHWSQK 1466
            G+SNKKKKLQRRMKIA+LKQI  RPDVVEVWDATA+DPKLLV+LKSYRN+VPVPRHW QK
Sbjct: 142  GISNKKKKLQRRMKIAELKQICLRPDVVEVWDATASDPKLLVFLKSYRNTVPVPRHWCQK 201

Query: 1465 RKFLQG 1448
            RKFLQG
Sbjct: 202  RKFLQG 207