BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001701
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279794.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER [...   189   8e-46
ref|XP_003558702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...   185   1e-44
gb|AFK44486.1| unknown [Medicago truncatula]                          182   2e-43
ref|XP_003606782.1| E3 ubiquitin-protein ligase [Medicago trunca...   182   2e-43
ref|XP_003606783.1| E3 ubiquitin-protein ligase [Medicago trunca...   181   3e-43

>ref|XP_002279794.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER [Vitis vinifera]
           gi|297736239|emb|CBI24877.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  189 bits (481), Expect = 8e-46
 Identities = 117/244 (47%), Positives = 141/244 (57%), Gaps = 30/244 (12%)
 Frame = -2

Query: 931 NRPVESHFINTGFP---TESFVYFFENF---PYNYAELSSSAVTHDQESAPRSMHTVSIK 770
           NR +E H+INTGFP   TESF+ FFE     P NYA+  +      QE+   +M+  S K
Sbjct: 4   NRQMEVHYINTGFPYTITESFMDFFEGLGHVPVNYAQAEAMHNQSIQENFYWTMNMNSYK 63

Query: 769 IEPASPGNTPFYG------HV--------------APIVEEPEDPEPLVTHF----AQDI 662
              + PG+T +YG      HV              + IVEEP   E   T         I
Sbjct: 64  FGFSGPGST-YYGPYDVNEHVPGIEVSRRPWEYPSSMIVEEPTTIETQPTGNEVMNVHAI 122

Query: 661 PEIYIRSPSNASSSQMFWQDNIDPDTMTYEELLDLGEAVGTQSRGLSQEQISSLPVXXXX 482
           PE    +  +A+SSQ  WQDN+DPD MTYEELLDLGEAVGTQSRGLSQE I+ LP     
Sbjct: 123 PEECSPNHYSATSSQAIWQDNVDPDNMTYEELLDLGEAVGTQSRGLSQEHINLLPTCRYK 182

Query: 481 XXXXXXXXXXXGDPCVICQMEYKRGDRQMTLPCKHVYHSKCASKWLSINKACPVCYTEVF 302
                       + CVICQM YKRGDRQ+ LPCKHVYH+ C +KWL+INK CPVC  EVF
Sbjct: 183 SGRLFSRKRSA-ERCVICQMGYKRGDRQIKLPCKHVYHTDCGTKWLTINKVCPVCNIEVF 241

Query: 301 GKDS 290
           G++S
Sbjct: 242 GEES 245


>ref|XP_003558702.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Brachypodium
           distachyon]
          Length = 251

 Score =  185 bits (470), Expect = 1e-44
 Identities = 111/241 (46%), Positives = 135/241 (56%), Gaps = 32/241 (13%)
 Frame = -2

Query: 931 NRPVESHFINTGFP---TESFVYFFENFPYNYAELSSSAVTHDQESAPRSM-HTVSIKIE 764
           +R +E H+INTGFP   TESF+ FFE   Y +A+ + +    DQ +   +M  T S K  
Sbjct: 4   SRQMELHYINTGFPYTITESFMDFFEGLTYAHADFALADAFQDQANPYWTMMQTNSYKYG 63

Query: 763 PASPGNTPFYGHVA------------------PIVEEPEDPEPLVTHFAQDIP------- 659
            +   N   YGHV                   P      D   +V   A + P       
Sbjct: 64  YSGASNYYSYGHVYDMNDYMHRADGGRRIWDNPTPASNTDSPNVVLQGAAEAPHPRASST 123

Query: 658 -EIYIRSP--SNASSSQMFWQDNIDPDTMTYEELLDLGEAVGTQSRGLSQEQISSLPVXX 488
            E  I+ P   N+SS Q+ WQDN+DPD MTYEELLDLGEAVGTQSRGLSQE+ISSLPV  
Sbjct: 124 TEECIQQPVHQNSSSPQVVWQDNVDPDNMTYEELLDLGEAVGTQSRGLSQERISSLPVTK 183

Query: 487 XXXXXXXXXXXXXGDPCVICQMEYKRGDRQMTLPCKHVYHSKCASKWLSINKACPVCYTE 308
                         + CVICQMEY+RGD QM LPCKHVYH+ C ++WLSINK CPVC+ E
Sbjct: 184 YKCGFFSRKKTRR-ERCVICQMEYRRGDLQMALPCKHVYHASCVTRWLSINKVCPVCFAE 242

Query: 307 V 305
           V
Sbjct: 243 V 243


>gb|AFK44486.1| unknown [Medicago truncatula]
          Length = 248

 Score =  182 bits (461), Expect = 2e-43
 Identities = 106/244 (43%), Positives = 136/244 (55%), Gaps = 30/244 (12%)
 Frame = -2

Query: 931 NRPVESHFINTGFPTE---SFVYFFENFPYNYAELSSSAVTHDQESAPRSMHTVSIKIEP 761
           N  +E H+ N  +P     SF+ +FE   Y +     S  +H QES   + ++   K   
Sbjct: 4   NPRMEVHYNNVSYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESQYPA-NSNFYKFGL 62

Query: 760 ASPGNTPFY--------GHVAPIVEEPEDP--------EPLV-----------THFAQDI 662
           + P NT +Y         H  P+V+E   P        EP +           T    + 
Sbjct: 63  SEPENTSYYRYNHGYEVNHHEPLVDEYRRPSENSSTICEPTLVVSPEWGEDGNTDTQDNS 122

Query: 661 PEIYIRSPSNASSSQMFWQDNIDPDTMTYEELLDLGEAVGTQSRGLSQEQISSLPVXXXX 482
            E   R  SN++ SQ+ WQDNIDPD MTYEELL+LGEAVGTQSRGL+QEQIS LPV    
Sbjct: 123 FECPRRHHSNSNDSQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKFK 182

Query: 481 XXXXXXXXXXXGDPCVICQMEYKRGDRQMTLPCKHVYHSKCASKWLSINKACPVCYTEVF 302
                       + CVICQMEYKRGD+++TLPCKH+YH+ C +KWL+INKACP+CYTEVF
Sbjct: 183 CGFFFRKKSRN-ERCVICQMEYKRGDKRITLPCKHLYHASCGNKWLTINKACPICYTEVF 241

Query: 301 GKDS 290
              S
Sbjct: 242 ADKS 245


>ref|XP_003606782.1| E3 ubiquitin-protein ligase [Medicago truncatula]
           gi|355507837|gb|AES88979.1| E3 ubiquitin-protein ligase
           [Medicago truncatula]
          Length = 254

 Score =  182 bits (461), Expect = 2e-43
 Identities = 106/244 (43%), Positives = 136/244 (55%), Gaps = 30/244 (12%)
 Frame = -2

Query: 931 NRPVESHFINTGFPTE---SFVYFFENFPYNYAELSSSAVTHDQESAPRSMHTVSIKIEP 761
           N  +E H+ N  +P     SF+ +FE   Y +     S  +H QES   + ++   K   
Sbjct: 10  NPHMEVHYNNVSYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESQYPA-NSNFYKFGL 68

Query: 760 ASPGNTPFY--------GHVAPIVEEPEDP--------EPLV-----------THFAQDI 662
           + P NT +Y         H  P+V+E   P        EP +           T    + 
Sbjct: 69  SEPENTSYYRYNHGYEVNHHEPLVDEYRRPSENSSTISEPTLVVSPEWGEDGNTDTQDNS 128

Query: 661 PEIYIRSPSNASSSQMFWQDNIDPDTMTYEELLDLGEAVGTQSRGLSQEQISSLPVXXXX 482
            E   R  SN++ SQ+ WQDNIDPD MTYEELL+LGEAVGTQSRGL+QEQIS LPV    
Sbjct: 129 FECPRRHHSNSNDSQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKFK 188

Query: 481 XXXXXXXXXXXGDPCVICQMEYKRGDRQMTLPCKHVYHSKCASKWLSINKACPVCYTEVF 302
                       + CVICQMEYKRGD+++TLPCKH+YH+ C +KWL+INKACP+CYTEVF
Sbjct: 189 CGFFFRKKSRN-ERCVICQMEYKRGDKRITLPCKHLYHASCGNKWLTINKACPICYTEVF 247

Query: 301 GKDS 290
              S
Sbjct: 248 ADKS 251


>ref|XP_003606783.1| E3 ubiquitin-protein ligase [Medicago truncatula]
           gi|355507838|gb|AES88980.1| E3 ubiquitin-protein ligase
           [Medicago truncatula]
          Length = 242

 Score =  181 bits (459), Expect = 3e-43
 Identities = 105/241 (43%), Positives = 135/241 (56%), Gaps = 30/241 (12%)
 Frame = -2

Query: 922 VESHFINTGFPTE---SFVYFFENFPYNYAELSSSAVTHDQESAPRSMHTVSIKIEPASP 752
           +E H+ N  +P     SF+ +FE   Y +     S  +H QES   + ++   K   + P
Sbjct: 1   MEVHYNNVSYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESQYPA-NSNFYKFGLSEP 59

Query: 751 GNTPFY--------GHVAPIVEEPEDP--------EPLV-----------THFAQDIPEI 653
            NT +Y         H  P+V+E   P        EP +           T    +  E 
Sbjct: 60  ENTSYYRYNHGYEVNHHEPLVDEYRRPSENSSTISEPTLVVSPEWGEDGNTDTQDNSFEC 119

Query: 652 YIRSPSNASSSQMFWQDNIDPDTMTYEELLDLGEAVGTQSRGLSQEQISSLPVXXXXXXX 473
             R  SN++ SQ+ WQDNIDPD MTYEELL+LGEAVGTQSRGL+QEQIS LPV       
Sbjct: 120 PRRHHSNSNDSQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKFKCGF 179

Query: 472 XXXXXXXXGDPCVICQMEYKRGDRQMTLPCKHVYHSKCASKWLSINKACPVCYTEVFGKD 293
                    + CVICQMEYKRGD+++TLPCKH+YH+ C +KWL+INKACP+CYTEVF   
Sbjct: 180 FFRKKSRN-ERCVICQMEYKRGDKRITLPCKHLYHASCGNKWLTINKACPICYTEVFADK 238

Query: 292 S 290
           S
Sbjct: 239 S 239