BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001683
         (2563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   562   e-157
emb|CBI15248.3| unnamed protein product [Vitis vinifera]              560   e-157
emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]   553   e-154
ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   541   e-151
ref|XP_002511553.1| conserved hypothetical protein [Ricinus comm...   534   e-149

>ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 443

 Score =  562 bits (1448), Expect = e-157
 Identities = 279/413 (67%), Positives = 323/413 (78%), Gaps = 13/413 (3%)
 Frame = -3

Query: 1523 SKVKRPFDEEGKEALFGQRKSCKLSDMLVRDEMTFTMYHLTLSPXXXXXXXXXXXXXXDT 1344
            S  KRP  E+G++   G RK  K SD    +E    ++ L+LS               D 
Sbjct: 34   SNSKRPL-EDGEDV--GLRKFSKPSDGHETEETMQGLHDLSLSQANQSNTHHDTGDQSDL 90

Query: 1343 SSLIQALGRDISINCLLHCSRADYNSIASLNRGFRNLIRNGELYRLRRQIGVIEHWVYFS 1164
            SSLI  +GRD SINCLL CSR+DY SIASLNR FR+LIR GELYRLRR++G++EHWVYFS
Sbjct: 91   SSLISQIGRDNSINCLLQCSRSDYGSIASLNRSFRSLIRGGELYRLRRKLGIVEHWVYFS 150

Query: 1163 CDVMEWKAFDPIHRLWMHLPRMPSNECFRCSDKESVAVGTELLVFGKEITSHVIWKYSIL 984
            CD+++W+AFDPI R WMHLPRMPS ECF CSDKES+AVGTELLVFGKE+TSHV++KYSIL
Sbjct: 151  CDLLQWEAFDPIRRRWMHLPRMPSYECFMCSDKESLAVGTELLVFGKEVTSHVVYKYSIL 210

Query: 983  TNTWTSGMEMNAPRCLFGSASLGEIAILAGGCDSQGTVLSSAELYNSETGTWKTLPSMRK 804
            TN+W+SGM MN+PRCLFGSASLGEIAILAGGCD +G +LSSAELYNS+TGTW TLPSM K
Sbjct: 211  TNSWSSGMNMNSPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSDTGTWVTLPSMNK 270

Query: 803  PRKMCSGVFMDGRFYVIGG---SNTDLLSCGEEYNLETETWHEIPNMCPRRTG------- 654
            PRKMCSG+FMD +FYVIGG    N++ L+CGE Y+LE  TW EIPNM P R G       
Sbjct: 271  PRKMCSGIFMDRKFYVIGGIGVGNSNSLTCGEVYDLEMRTWREIPNMFPGRNGSAGVAEA 330

Query: 653  ---PTEAPPLVAVVNNELYAADYAERELMKYNKEKISWDTVGRLPERAFSMNGWGLAFRA 483
                 EAPPLVAVVNNELYAADYAE+E+ KY+K +  W TVGRLPE+A SMNGWGLAFRA
Sbjct: 331  TPAAAEAPPLVAVVNNELYAADYAEKEVRKYDKARNLWVTVGRLPEQAVSMNGWGLAFRA 390

Query: 482  CGEQLIVIGGPRAVGGGMIELNSWVPTEGQPQWNLLASKHLGSFVYNCAVMGC 324
            CG++LIVIGGPR +GGG+IELNSW P EG PQW+LLA K  GSFVYNCAVMGC
Sbjct: 391  CGDRLIVIGGPRVLGGGIIELNSWSPGEGPPQWDLLARKQSGSFVYNCAVMGC 443


>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  560 bits (1442), Expect = e-157
 Identities = 267/373 (71%), Positives = 307/373 (82%), Gaps = 3/373 (0%)
 Frame = -3

Query: 1433 DEMTFTMYHLTLSPXXXXXXXXXXXXXXDTSSLIQALGRDISINCLLHCSRADYNSIASL 1254
            DE    ++ L+LS               D SSLI  +GRD SINCLL CSR+DY SIASL
Sbjct: 110  DETMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIASL 169

Query: 1253 NRGFRNLIRNGELYRLRRQIGVIEHWVYFSCDVMEWKAFDPIHRLWMHLPRMPSNECFRC 1074
            NR FR+LIR GELYRLRR++G++EHWVYFSCD+++W+AFDPI R WMHLPRMPS ECF C
Sbjct: 170  NRSFRSLIRGGELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECFMC 229

Query: 1073 SDKESVAVGTELLVFGKEITSHVIWKYSILTNTWTSGMEMNAPRCLFGSASLGEIAILAG 894
            SDKES+AVGTELLVFGKE+TSHV++KYSILTN+W+SGM MN+PRCLFGSASLGEIAILAG
Sbjct: 230  SDKESLAVGTELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAILAG 289

Query: 893  GCDSQGTVLSSAELYNSETGTWKTLPSMRKPRKMCSGVFMDGRFYVIGG---SNTDLLSC 723
            GCD +G +LSSAELYNS+TGTW TLPSM KPRKMCSG+FMD +FYVIGG    N++ L+C
Sbjct: 290  GCDPRGNILSSAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSLTC 349

Query: 722  GEEYNLETETWHEIPNMCPRRTGPTEAPPLVAVVNNELYAADYAERELMKYNKEKISWDT 543
            GE Y+LE  TW EIPNM P R G   APPLVAVVNNELYAADYAE+E+ KY+K +  W T
Sbjct: 350  GEVYDLEMRTWREIPNMFPGRNGSAGAPPLVAVVNNELYAADYAEKEVRKYDKARNLWVT 409

Query: 542  VGRLPERAFSMNGWGLAFRACGEQLIVIGGPRAVGGGMIELNSWVPTEGQPQWNLLASKH 363
            VGRLPE+A SMNGWGLAFRACG++LIVIGGPR +GGG+IELNSW P EG PQW+LLA K 
Sbjct: 410  VGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRVLGGGIIELNSWSPGEGPPQWDLLARKQ 469

Query: 362  LGSFVYNCAVMGC 324
             GSFVYNCAVMGC
Sbjct: 470  SGSFVYNCAVMGC 482


>emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]
          Length = 1318

 Score =  553 bits (1424), Expect = e-154
 Identities = 275/409 (67%), Positives = 319/409 (77%), Gaps = 13/409 (3%)
 Frame = -3

Query: 1523 SKVKRPFDEEGKEALFGQRKSCKLSDMLVRDEMTFTMYHLTLSPXXXXXXXXXXXXXXDT 1344
            S  KRP  E+G++   G RK  K SD    +E    ++ L+LS               D 
Sbjct: 34   SNSKRPL-EDGEDV--GLRKFSKPSDGHETEETMQGLHDLSLSQANQSNTHHDTGDQSDL 90

Query: 1343 SSLIQALGRDISINCLLHCSRADYNSIASLNRGFRNLIRNGELYRLRRQIGVIEHWVYFS 1164
            SSLI  +GRD SINCLL CSR+DY SIASLNR FR+LIR GELYRLRR++G++EHWVYFS
Sbjct: 91   SSLISQIGRDNSINCLLQCSRSDYGSIASLNRSFRSLIRGGELYRLRRKLGIVEHWVYFS 150

Query: 1163 CDVMEWKAFDPIHRLWMHLPRMPSNECFRCSDKESVAVGTELLVFGKEITSHVIWKYSIL 984
            CD+++W+AFDPI R WMHLPRMPS ECF CSDKES+AVGTELLVFGKE+TSHV++KYSIL
Sbjct: 151  CDLLQWEAFDPIRRRWMHLPRMPSYECFMCSDKESLAVGTELLVFGKEVTSHVVYKYSIL 210

Query: 983  TNTWTSGMEMNAPRCLFGSASLGEIAILAGGCDSQGTVLSSAELYNSETGTWKTLPSMRK 804
            TN+W+SGM MN+PRCLFGSASLGEIAILAGGCD +G +LSSAELYNS+TGTW TLPSM K
Sbjct: 211  TNSWSSGMNMNSPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSDTGTWVTLPSMNK 270

Query: 803  PRKMCSGVFMDGRFYVIGG---SNTDLLSCGEEYNLETETWHEIPNMCPRRTG------- 654
            PRKMCSG+FMD +FYVIGG    N++ L+CGE Y+LE  TW EIPNM P R G       
Sbjct: 271  PRKMCSGIFMDRKFYVIGGIGVGNSNSLTCGEVYDLEMRTWREIPNMFPGRNGSAGVAEA 330

Query: 653  ---PTEAPPLVAVVNNELYAADYAERELMKYNKEKISWDTVGRLPERAFSMNGWGLAFRA 483
                 EAPPLVAVVNNELYAADYAE+E+ KY+K +  W TVGRLPE+A SMNGWGLAFRA
Sbjct: 331  TPAAAEAPPLVAVVNNELYAADYAEKEVRKYDKARNLWVTVGRLPEQAVSMNGWGLAFRA 390

Query: 482  CGEQLIVIGGPRAVGGGMIELNSWVPTEGQPQWNLLASKHLGSFVYNCA 336
            CG++LIVIGGPR +GGG+IELNSW P EG PQW+LLA K  GSFVYNCA
Sbjct: 391  CGDRLIVIGGPRVLGGGIIELNSWSPGEGPPQWDLLARKQSGSFVYNCA 439


>ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 541

 Score =  541 bits (1395), Expect = e-151
 Identities = 289/499 (57%), Positives = 343/499 (68%), Gaps = 38/499 (7%)
 Frame = -3

Query: 1706 DDVNGKRPLK-EEREKSLLRKRKPSKPLDISGKEELTLSLHDLRLSSG-DLSDQPSHDFV 1533
            +D NGK P   + +EK ++   K  +PL+   +EE  ++L   +     DL DQ   D  
Sbjct: 49   EDANGKCPPDIDAQEKQVIPAIKRRRPLEFDSEEEFRINLAIGKCPLEIDLEDQHHPDV- 107

Query: 1532 QVNSKVKRPFDEEGKEALFGQRKSCKLSDMLVRDEMTFTMYHLTLSPXXXXXXXXXXXXX 1353
               +  KRP + + +E         KL++     E T T+  LTLSP             
Sbjct: 108  ---AGGKRPLEIDEEEPQLSS--FFKLTEAHESVEPTPTISDLTLSPEDQSHKQGPPEDE 162

Query: 1352 XDT-------------------------SSLIQALGRDISINCLLHCSRADYNSIASLNR 1248
             D                           SLIQ +GRD+SI+CL+ CSR+DY  IASLNR
Sbjct: 163  SDKPGINLSLSLADQSNSQHQAEFNSDLDSLIQPIGRDLSISCLIRCSRSDYGFIASLNR 222

Query: 1247 GFRNLIRNGELYRLRRQIGVIEHWVYFSCDVMEWKAFDPIHRLWMHLPRMPSNECFRCSD 1068
             FR++IR+GELYR RR+ GVIEHW+YFSC ++EW+AFDPI   WM LP M  NECF CSD
Sbjct: 223  SFRSIIRSGELYRERRKNGVIEHWIYFSCQLLEWEAFDPIRHRWMRLPTMTFNECFMCSD 282

Query: 1067 KESVAVGTELLVFGKEITSHVIWKYSILTNTWTSGMEMNAPRCLFGSASLGEIAILAGGC 888
            KES+AVGTELLVFGKE+ SHVI++YSILTN+W+SGM MNAPRCLFGSASLGEIAILAGGC
Sbjct: 283  KESLAVGTELLVFGKEVMSHVIYRYSILTNSWSSGMSMNAPRCLFGSASLGEIAILAGGC 342

Query: 887  DSQGTVLSSAELYNSETGTWKTLPSMRKPRKMCSGVFMDGRFYV---IGGSNTDLLSCGE 717
            DSQG +LSSAELYNSETG W+ LPSM KPRKMCSGVFMDG+FYV   IGGS++  L CGE
Sbjct: 343  DSQGNILSSAELYNSETGAWEMLPSMNKPRKMCSGVFMDGKFYVIGGIGGSDSKPLPCGE 402

Query: 716  EYNLETETWHEIPNMCPRRTG--------PTEAPPLVAVVNNELYAADYAERELMKYNKE 561
            EYNL+T  W EI +M P R+G          EAPPLVAVVNNELYAADYA+ E+ KY KE
Sbjct: 403  EYNLQTRVWTEIADMSPVRSGAPRENETAAAEAPPLVAVVNNELYAADYADMEVRKYEKE 462

Query: 560  KISWDTVGRLPERAFSMNGWGLAFRACGEQLIVIGGPRAVGGGMIELNSWVPTEGQPQWN 381
               W TVGRLPERA SMNGWGLAFRACG++L+VIGGPRA+G G IELNSWVP+EG PQWN
Sbjct: 463  SRLWLTVGRLPERAVSMNGWGLAFRACGDKLVVIGGPRALGEGFIELNSWVPSEGPPQWN 522

Query: 380  LLASKHLGSFVYNCAVMGC 324
            +LA K  G+FVYNCAVMGC
Sbjct: 523  VLAVKQSGNFVYNCAVMGC 541


>ref|XP_002511553.1| conserved hypothetical protein [Ricinus communis]
            gi|223550668|gb|EEF52155.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 559

 Score =  534 bits (1375), Expect = e-149
 Identities = 256/353 (72%), Positives = 294/353 (83%), Gaps = 12/353 (3%)
 Frame = -3

Query: 1346 TSSLIQALGRDISINCLLHCSRADYNSIASLNRGFRNLIRNGELYRLRRQIGVIEHWVYF 1167
            +SSLI  LGR++SI+CLLHCSR+DY +IASLN+ F+ ++R+G LY+LRR +G +EHWVYF
Sbjct: 207  SSSLISELGRELSISCLLHCSRSDYGNIASLNKSFQFVVRSGLLYKLRRGMGYVEHWVYF 266

Query: 1166 SCDVMEWKAFDPIHRLWMHLPRMPSNECFRCSDKESVAVGTELLVFGKEITSHVIWKYSI 987
            SC+++EW+AFDPI R WMHLPRM SNECF CSDKES+AVGTELLVFGKEI SHVI+KYSI
Sbjct: 267  SCNLLEWEAFDPIRRRWMHLPRMNSNECFMCSDKESLAVGTELLVFGKEIESHVIYKYSI 326

Query: 986  LTNTWTSGMEMNAPRCLFGSASLGEIAILAGGCDSQGTVLSSAELYNSETGTWKTLPSMR 807
            LTNTWTSGM+MN PRCLFGSASLGEIAILAGGCD  G +LSSAELYNSET TW T+PSM 
Sbjct: 327  LTNTWTSGMKMNTPRCLFGSASLGEIAILAGGCDPCGNILSSAELYNSETDTWITIPSMH 386

Query: 806  KPRKMCSGVFMDGRFYVIGGS---NTDLLSCGEEYNLETETWHEIPNMCPRRTGPT---- 648
            K RKMCSGVFMDG+FYVIGG+   NT +L+CGE Y+L T+TW  IP+M P R G T    
Sbjct: 387  KARKMCSGVFMDGKFYVIGGTGTGNTKMLTCGEVYDLATKTWLVIPDMFPARNGGTGRNE 446

Query: 647  -----EAPPLVAVVNNELYAADYAERELMKYNKEKISWDTVGRLPERAFSMNGWGLAFRA 483
                 EAPPLVAVVNNELYAADYA +E+ KY+K K  W  +G LPE   SMNGWGLAFRA
Sbjct: 447  TPAAAEAPPLVAVVNNELYAADYAHKEVRKYDKRKNLWIALGGLPEHVVSMNGWGLAFRA 506

Query: 482  CGEQLIVIGGPRAVGGGMIELNSWVPTEGQPQWNLLASKHLGSFVYNCAVMGC 324
            CG++LIVIGGPR +GGGMIELNSWVP EG P+WNLLA K  GSFVYNCAVMGC
Sbjct: 507  CGDRLIVIGGPRTLGGGMIELNSWVPGEGPPKWNLLAKKPSGSFVYNCAVMGC 559