BLASTX nr result
ID: Cimicifuga21_contig00001672
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001672
(1437 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27495.3| unnamed protein product [Vitis vinifera] 626 e-177
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi... 625 e-177
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi... 621 e-175
emb|CBI24106.3| unnamed protein product [Vitis vinifera] 621 e-175
ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|2... 600 e-169
>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 626 bits (1614), Expect = e-177
Identities = 303/450 (67%), Positives = 378/450 (84%)
Frame = -1
Query: 1437 RLISSCIKARKFRMTEFLLGVFETEESLAVSAFESAMKGYNKLHMYSSTVIVFNRMKSAG 1258
RLISSCI+ARKFR+TE LL VF + +A+ F SAM GYNKLHM+SST+ V++RMKSAG
Sbjct: 95 RLISSCIRARKFRITESLLEVFSYNDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAG 154
Query: 1257 VLPDAGCYCRVMEAYSKLGNTEKVLVLFNELKNNDFFKRSPLSTQIFGILCDSLGKSRRA 1078
V+P++ Y R+MEAY K+ + EKV+ LF E ++ SP STQI+ ILC+SLGK RA
Sbjct: 155 VVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKI-DSSPFSTQIYRILCESLGKMGRA 213
Query: 1077 FEALELYKEMRGNGIKENSSIYSSLICSFASLREVEVAEQLFQEAKEKKMVKDPALFLKL 898
FEALE +++M GI E+S++YSSLICSFAS+REV+VAE+LF+EA+EKK+++DP +FLKL
Sbjct: 214 FEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKL 273
Query: 897 VLMYVEEGSMEKTLGLVEAMKEMNIKVTDCIFCAVINGYCKKRGLKETIKVYEDLVSSSC 718
VLMYVEEG ME+TL +V+AMK + I+V+DCIFCA++NG+ KKRGL+ KVY++L+ C
Sbjct: 274 VLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 333
Query: 717 EPGQVTYASIINIYCRLGLYDKAEMVFSEMEEKGFLKCVVAYSSMVSMYGKVGRVKDAMK 538
EPGQVTYASIIN+YCR+ LY KAEMVFSEME+KGF KCVVAYSSMV MYGK GR+++AM+
Sbjct: 334 EPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 393
Query: 537 LVAKMKERGCKPNVWVYNSLIDMHGNANNLRQVEKLWKEMKRRKIVPDKVSYTSIIKAYN 358
LVAKMKERGC+PNVWVYNSL+DMHG NLRQVEKLWKEMKR+K+VPD+VSYTS+I AY+
Sbjct: 394 LVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYS 453
Query: 357 KARDFDACIEYYQEFRLNGGVIDRAMAGIMVGVLSKSTRIDELVKLLQDMKSERMVLDVR 178
KA DF+ C+ +Y EFR+NGGVIDR +AGIMVG+ SKS R+DELVKLLQDMK+E LD R
Sbjct: 454 KAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDER 513
Query: 177 LYKSAMNALRDAGLEFQAKWFEESFKLTDV 88
LY+SA+NALRDAGL+ QA+W +ESF T V
Sbjct: 514 LYRSALNALRDAGLQMQARWLQESFDTTFV 543
>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 625 bits (1613), Expect = e-177
Identities = 302/448 (67%), Positives = 377/448 (84%)
Frame = -1
Query: 1437 RLISSCIKARKFRMTEFLLGVFETEESLAVSAFESAMKGYNKLHMYSSTVIVFNRMKSAG 1258
RLISSCI+ARKFR+TE LL VF + +A+ F SAM GYNKLHM+SST+ V++RMKSAG
Sbjct: 157 RLISSCIRARKFRITESLLEVFSYNDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAG 216
Query: 1257 VLPDAGCYCRVMEAYSKLGNTEKVLVLFNELKNNDFFKRSPLSTQIFGILCDSLGKSRRA 1078
V+P++ Y R+MEAY K+ + EKV+ LF E ++ SP STQI+ ILC+SLGK RA
Sbjct: 217 VVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKI-DSSPFSTQIYRILCESLGKMGRA 275
Query: 1077 FEALELYKEMRGNGIKENSSIYSSLICSFASLREVEVAEQLFQEAKEKKMVKDPALFLKL 898
FEALE +++M GI E+S++YSSLICSFAS+REV+VAE+LF+EA+EKK+++DP +FLKL
Sbjct: 276 FEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKL 335
Query: 897 VLMYVEEGSMEKTLGLVEAMKEMNIKVTDCIFCAVINGYCKKRGLKETIKVYEDLVSSSC 718
VLMYVEEG ME+TL +V+AMK + I+V+DCIFCA++NG+ KKRGL+ KVY++L+ C
Sbjct: 336 VLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 395
Query: 717 EPGQVTYASIINIYCRLGLYDKAEMVFSEMEEKGFLKCVVAYSSMVSMYGKVGRVKDAMK 538
EPGQVTYASIIN+YCR+ LY KAEMVFSEME+KGF KCVVAYSSMV MYGK GR+++AM+
Sbjct: 396 EPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 455
Query: 537 LVAKMKERGCKPNVWVYNSLIDMHGNANNLRQVEKLWKEMKRRKIVPDKVSYTSIIKAYN 358
LVAKMKERGC+PNVWVYNSL+DMHG NLRQVEKLWKEMKR+K+VPD+VSYTS+I AY+
Sbjct: 456 LVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYS 515
Query: 357 KARDFDACIEYYQEFRLNGGVIDRAMAGIMVGVLSKSTRIDELVKLLQDMKSERMVLDVR 178
KA DF+ C+ +Y EFR+NGGVIDR +AGIMVG+ SKS R+DELVKLLQDMK+E LD R
Sbjct: 516 KAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDER 575
Query: 177 LYKSAMNALRDAGLEFQAKWFEESFKLT 94
LY+SA+NALRDAGL+ QA+W +ESF T
Sbjct: 576 LYRSALNALRDAGLQMQARWLQESFDTT 603
>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 621 bits (1601), Expect = e-175
Identities = 299/445 (67%), Positives = 375/445 (84%)
Frame = -1
Query: 1437 RLISSCIKARKFRMTEFLLGVFETEESLAVSAFESAMKGYNKLHMYSSTVIVFNRMKSAG 1258
RLISSCI+ARKFR+TE LL VF + +A+ SAM GYNKLHM+SST+ V++RMKSAG
Sbjct: 158 RLISSCIRARKFRITESLLEVFSYNDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAG 217
Query: 1257 VLPDAGCYCRVMEAYSKLGNTEKVLVLFNELKNNDFFKRSPLSTQIFGILCDSLGKSRRA 1078
V+P++ Y R+MEAY K+ + EKV+ LF E ++ SP STQI+ ILC+SLGK RA
Sbjct: 218 VVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKI-DSSPFSTQIYRILCESLGKMGRA 276
Query: 1077 FEALELYKEMRGNGIKENSSIYSSLICSFASLREVEVAEQLFQEAKEKKMVKDPALFLKL 898
FEALE +++M GI E+S++YSSLICSFAS+REV+VAE+LF+EA+EKK+++DP +FLKL
Sbjct: 277 FEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKL 336
Query: 897 VLMYVEEGSMEKTLGLVEAMKEMNIKVTDCIFCAVINGYCKKRGLKETIKVYEDLVSSSC 718
VLMYVEEG ME+T+ +V+AMK + I+V+DCIFCA++NG+ KKRGL+ KVY++L+ C
Sbjct: 337 VLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 396
Query: 717 EPGQVTYASIINIYCRLGLYDKAEMVFSEMEEKGFLKCVVAYSSMVSMYGKVGRVKDAMK 538
EPGQVTYASIIN+YCR+ LY KAEM+FSEME+KGF KCVVAYSSMV MYGK GR+++AM+
Sbjct: 397 EPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 456
Query: 537 LVAKMKERGCKPNVWVYNSLIDMHGNANNLRQVEKLWKEMKRRKIVPDKVSYTSIIKAYN 358
LVAKMKERGCKPNVWVYNSL+DMHG NLRQVEKLWKEMKR+K+VPD+VSYTS+I AY+
Sbjct: 457 LVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYS 516
Query: 357 KARDFDACIEYYQEFRLNGGVIDRAMAGIMVGVLSKSTRIDELVKLLQDMKSERMVLDVR 178
KA DF+ C+ +Y EFR+NGGVIDR +AGIMVG+ SKS R+DELVKLLQDMK+E LD R
Sbjct: 517 KAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDER 576
Query: 177 LYKSAMNALRDAGLEFQAKWFEESF 103
LY+SA+NALRDAGL+ QA+W +ESF
Sbjct: 577 LYRSALNALRDAGLQMQARWLQESF 601
Score = 74.7 bits (182), Expect = 6e-11
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Frame = -1
Query: 1341 FESAMKGYNKLHMYSSTVIVFNRMKSAGVLPDAGCYCRVMEAYSKLGNTEKVLVLFNELK 1162
F + + G+ K + V++ + G P Y ++ Y ++ K ++F+E++
Sbjct: 368 FCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEME 427
Query: 1161 NNDFFKRSPLSTQIFGILCDSLGKSRRAFEALELYKEMRGNGIKENSSIYSSLICSFASL 982
F K + + GK+ R EA+ L +M+ G K N +Y+SL+ +
Sbjct: 428 KKGFNK----CVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRV 483
Query: 981 REVEVAEQLFQEAKEKKMVKDPALFLKLVLMYVEEGSMEKTLGLVEAMKEMNIKVTDCIF 802
+ + E+L++E K KK+V D + ++ Y + G E + + MN V D +
Sbjct: 484 KNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFR-MNGGVIDRVI 542
Query: 801 CAVINGYCKKRG-LKETIKVYEDLVSSSCEPGQVTYASIINIYCRLGLYDKAEMVFSEME 625
++ G K G + E +K+ +D+ + + Y S +N GL +A + +
Sbjct: 543 AGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESFD 602
Query: 624 EKGFL 610
K ++
Sbjct: 603 TKVYI 607
>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 621 bits (1601), Expect = e-175
Identities = 299/445 (67%), Positives = 375/445 (84%)
Frame = -1
Query: 1437 RLISSCIKARKFRMTEFLLGVFETEESLAVSAFESAMKGYNKLHMYSSTVIVFNRMKSAG 1258
RLISSCI+ARKFR+TE LL VF + +A+ SAM GYNKLHM+SST+ V++RMKSAG
Sbjct: 81 RLISSCIRARKFRITESLLEVFSYNDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAG 140
Query: 1257 VLPDAGCYCRVMEAYSKLGNTEKVLVLFNELKNNDFFKRSPLSTQIFGILCDSLGKSRRA 1078
V+P++ Y R+MEAY K+ + EKV+ LF E ++ SP STQI+ ILC+SLGK RA
Sbjct: 141 VVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKI-DSSPFSTQIYRILCESLGKMGRA 199
Query: 1077 FEALELYKEMRGNGIKENSSIYSSLICSFASLREVEVAEQLFQEAKEKKMVKDPALFLKL 898
FEALE +++M GI E+S++YSSLICSFAS+REV+VAE+LF+EA+EKK+++DP +FLKL
Sbjct: 200 FEALEFFRDMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKL 259
Query: 897 VLMYVEEGSMEKTLGLVEAMKEMNIKVTDCIFCAVINGYCKKRGLKETIKVYEDLVSSSC 718
VLMYVEEG ME+T+ +V+AMK + I+V+DCIFCA++NG+ KKRGL+ KVY++L+ C
Sbjct: 260 VLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 319
Query: 717 EPGQVTYASIINIYCRLGLYDKAEMVFSEMEEKGFLKCVVAYSSMVSMYGKVGRVKDAMK 538
EPGQVTYASIIN+YCR+ LY KAEM+FSEME+KGF KCVVAYSSMV MYGK GR+++AM+
Sbjct: 320 EPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 379
Query: 537 LVAKMKERGCKPNVWVYNSLIDMHGNANNLRQVEKLWKEMKRRKIVPDKVSYTSIIKAYN 358
LVAKMKERGCKPNVWVYNSL+DMHG NLRQVEKLWKEMKR+K+VPD+VSYTS+I AY+
Sbjct: 380 LVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYS 439
Query: 357 KARDFDACIEYYQEFRLNGGVIDRAMAGIMVGVLSKSTRIDELVKLLQDMKSERMVLDVR 178
KA DF+ C+ +Y EFR+NGGVIDR +AGIMVG+ SKS R+DELVKLLQDMK+E LD R
Sbjct: 440 KAGDFETCMRFYHEFRMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDER 499
Query: 177 LYKSAMNALRDAGLEFQAKWFEESF 103
LY+SA+NALRDAGL+ QA+W +ESF
Sbjct: 500 LYRSALNALRDAGLQMQARWLQESF 524
Score = 75.1 bits (183), Expect = 4e-11
Identities = 56/253 (22%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Frame = -1
Query: 1341 FESAMKGYNKLHMYSSTVIVFNRMKSAGVLPDAGCYCRVMEAYSKLGNTEKVLVLFNELK 1162
F + + G+ K + V++ + G P Y ++ Y ++ K ++F+E++
Sbjct: 291 FCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAEMMFSEME 350
Query: 1161 NNDFFKRSPLSTQIFGILCDSLGKSRRAFEALELYKEMRGNGIKENSSIYSSLICSFASL 982
F K + + GK+ R EA+ L +M+ G K N +Y+SL+ +
Sbjct: 351 KKGFNK----CVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRV 406
Query: 981 REVEVAEQLFQEAKEKKMVKDPALFLKLVLMYVEEGSMEKTLGLVEAMKEMNIKVTDCIF 802
+ + E+L++E K KK+V D + ++ Y + G E + + MN V D +
Sbjct: 407 KNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFR-MNGGVIDRVI 465
Query: 801 CAVINGYCKKRG-LKETIKVYEDLVSSSCEPGQVTYASIINIYCRLGLYDKAEMVFSEME 625
++ G K G + E +K+ +D+ + + Y S +N GL +A + +
Sbjct: 466 AGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQARWLQESFD 525
Query: 624 EKGFLKCVVAYSS 586
K ++ A S+
Sbjct: 526 TKVYIFKTAAEST 538
>ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|222863781|gb|EEF00912.1|
predicted protein [Populus trichocarpa]
Length = 525
Score = 600 bits (1546), Expect = e-169
Identities = 286/446 (64%), Positives = 365/446 (81%), Gaps = 1/446 (0%)
Frame = -1
Query: 1434 LISSCIKARKFRMTEFLLGVFETEESLAVSAFESAMKGYNKLHMYSSTVIVFNRMKSAGV 1255
L+SSCI+AR+F++ E LL F+++ +AV AF+SAMKGYNKLHMY ST+ V +M AG+
Sbjct: 79 LVSSCIRARRFKIVENLLENFKSDSKIAVLAFDSAMKGYNKLHMYGSTISVHEKMILAGI 138
Query: 1254 LPDAGCYCRVMEAYSKLGNTEKVLVLFNELKNNDFFKRSPLSTQIFGILCDSLGKSRRAF 1075
D+ CYC++M+AY KLG+ EKV+ LFNE ++ + + QIF ILC SLG+S +AF
Sbjct: 139 PLDSRCYCQIMKAYYKLGDAEKVVALFNEFESRKLDSKPMILRQIFKILCLSLGRSGQAF 198
Query: 1074 EALELYKEMRGNGIKENSSIYSSLICSFASLREVEVAEQLFQEAKEKKMVKDPALFLKLV 895
+ALE ++MR GI E+SSIYSSLICSFA++REVEVAE+LF+EA EK+M++DP + L+LV
Sbjct: 199 QALEYSRDMRKKGILEDSSIYSSLICSFANIREVEVAEELFKEALEKRMLRDPEIVLRLV 258
Query: 894 LMYVEEGSMEKTLGLVEAMK-EMNIKVTDCIFCAVINGYCKKRGLKETIKVYEDLVSSSC 718
LMY+EEG MEKT+ +V+ MK N+KV+DCIFCA++NG+ K+RG +KVYE+L C
Sbjct: 259 LMYIEEGQMEKTIEIVKVMKGTANLKVSDCIFCAIVNGFSKRRGFSAAVKVYEELKYDGC 318
Query: 717 EPGQVTYASIINIYCRLGLYDKAEMVFSEMEEKGFLKCVVAYSSMVSMYGKVGRVKDAMK 538
+PGQVTYAS+IN YCR GLY KAEMVFSEMEEKGF KCVVAYSSM+SMYGK GR +DA +
Sbjct: 319 DPGQVTYASVINAYCRAGLYSKAEMVFSEMEEKGFDKCVVAYSSMISMYGKTGRARDATR 378
Query: 537 LVAKMKERGCKPNVWVYNSLIDMHGNANNLRQVEKLWKEMKRRKIVPDKVSYTSIIKAYN 358
LVAKMK +GC+PNVW+YNSL+DMHG A NLRQVEKLWKEMKRRK+ PDKV+Y+S+I AYN
Sbjct: 379 LVAKMKLKGCEPNVWIYNSLLDMHGRAKNLRQVEKLWKEMKRRKVAPDKVTYSSVISAYN 438
Query: 357 KARDFDACIEYYQEFRLNGGVIDRAMAGIMVGVLSKSTRIDELVKLLQDMKSERMVLDVR 178
K+++++ C+ YY E+R+NGGVID AMAGIM GV SK +RIDELVKLL+DMKSE +D R
Sbjct: 439 KSKEYEMCVRYYHEYRINGGVIDGAMAGIMAGVFSKISRIDELVKLLRDMKSEGTPIDER 498
Query: 177 LYKSAMNALRDAGLEFQAKWFEESFK 100
LY+SA NA+RDAGL+ QAKW ++SFK
Sbjct: 499 LYRSATNAMRDAGLDIQAKWLQDSFK 524