BLASTX nr result
ID: Cimicifuga21_contig00001642
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001642
(2057 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro... 938 0.0
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2... 925 0.0
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro... 922 0.0
ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2... 922 0.0
ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding pro... 921 0.0
>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Vitis vinifera]
Length = 586
Score = 938 bits (2424), Expect = 0.0
Identities = 500/569 (87%), Positives = 532/569 (93%), Gaps = 2/569 (0%)
Frame = -2
Query: 1990 MASANAITSASILQFPKQASLGKKTSQRQ--KLNYRPSTTRFVVRANAKEIAFGQASRTA 1817
MASANAI++ASI++ PKQ S ++ +Q+Q K NYRPS RFVVRA+AKEIAF Q+SR A
Sbjct: 1 MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRAA 60
Query: 1816 LQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALIRE 1637
LQAGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIELAD MENAGAALIRE
Sbjct: 61 LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIRE 120
Query: 1636 VASKTNDSAGDGTTTASVLAREIIKLGLLTVTSGANPVSIKKGIDKTVQGLVAELERKAR 1457
VASKTNDSAGDGTTTASVLAREIIKLGLL+VTSGANPVSIKKGIDKTV LV ELE+KAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKAR 180
Query: 1456 SIKGSDDVKAVATISAGNDEVIGLMIADAIDKVGSDGVLSIESSSSFETTVDVEEGMEID 1277
++G DD+KAVA+ISAGNDE IG MIADAI+KVG DGVLSIESSSSFETTVDVEEGMEID
Sbjct: 181 PVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEID 240
Query: 1276 RGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRVPLLIIAEDVTG 1097
RGYISPQFVTNPEKLIAEFENA+VLVTDQKI++IKDIIPLLEKTTQLR PLLI+AEDVTG
Sbjct: 241 RGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTG 300
Query: 1096 EALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTEVEQ 917
EALATLVVNKLRGI+NVAAIKAPGFGERRKALLQDIAI+TGAEFQA+DLGLLIENT VEQ
Sbjct: 301 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQ 360
Query: 916 LGIARKVTITKDSTTIIADAASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGV 737
LG+ARKVTITKDSTTIIADAASKDEIQARIAQIKKEL+ETDSVYD+EKLAERIAKLSGGV
Sbjct: 361 LGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGV 420
Query: 736 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKDKLEDA 557
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS +VPAIKDKLEDA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDA 480
Query: 556 DERLGADIVQKALVAPASLIAHNAXXXXXXXXEKIKASEWEIGYNAMTDTYENLMEAGVI 377
DERLGADIVQKALVAPASLIAHNA EKIKA EW +GYNAMTD YENL+EAGVI
Sbjct: 481 DERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAGVI 540
Query: 376 DPAKVTRCALQNAASVAGMVLTTQAIVVE 290
DPAKV RCALQNAASVAGMVLTTQAIVVE
Sbjct: 541 DPAKVARCALQNAASVAGMVLTTQAIVVE 569
>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
predicted protein [Populus trichocarpa]
Length = 587
Score = 925 bits (2391), Expect = 0.0
Identities = 491/569 (86%), Positives = 530/569 (93%), Gaps = 2/569 (0%)
Frame = -2
Query: 1990 MASANAITSASILQFPKQASLGKKTSQRQ--KLNYRPSTTRFVVRANAKEIAFGQASRTA 1817
MA++NA+++ASIL PKQ L ++ +Q+ +LNY S+ RF VRANAK+IAF Q SR A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQKSRAA 60
Query: 1816 LQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALIRE 1637
LQ+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 1636 VASKTNDSAGDGTTTASVLAREIIKLGLLTVTSGANPVSIKKGIDKTVQGLVAELERKAR 1457
VASKTNDSAGDGTTTASVLAREIIKLGLL+VTSGANPVSIK+GIDKTVQGLV ELE+KAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR 180
Query: 1456 SIKGSDDVKAVATISAGNDEVIGLMIADAIDKVGSDGVLSIESSSSFETTVDVEEGMEID 1277
+KG DD+KAVA+ISAGNDE+IG MIADAIDKVG DGVLSIESSSSFET V+VEEGMEID
Sbjct: 181 PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEVEEGMEID 240
Query: 1276 RGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRVPLLIIAEDVTG 1097
RGYISPQFVTNPEKLI EFENA+VL+TDQKI++IKDIIPLLEKTTQLR PLLIIAEDVTG
Sbjct: 241 RGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG 300
Query: 1096 EALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTEVEQ 917
EALATLVVNKLRG++NVAAIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IENT +EQ
Sbjct: 301 EALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 916 LGIARKVTITKDSTTIIADAASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGV 737
LG+ARKVTI+KDSTTIIADAASKDE+QARIAQ+KKELSETDSVYDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 736 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKDKLEDA 557
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAIKDK+EDA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDA 480
Query: 556 DERLGADIVQKALVAPASLIAHNAXXXXXXXXEKIKASEWEIGYNAMTDTYENLMEAGVI 377
DERLGADIVQKALV+PASLIA NA EK+KASEWEIGYNAMTD YENLMEAGVI
Sbjct: 481 DERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVI 540
Query: 376 DPAKVTRCALQNAASVAGMVLTTQAIVVE 290
DPAKVTRCALQN+ASVAGMVLTTQAIVVE
Sbjct: 541 DPAKVTRCALQNSASVAGMVLTTQAIVVE 569
>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Glycine max]
Length = 584
Score = 922 bits (2383), Expect = 0.0
Identities = 482/567 (85%), Positives = 527/567 (92%)
Frame = -2
Query: 1990 MASANAITSASILQFPKQASLGKKTSQRQKLNYRPSTTRFVVRANAKEIAFGQASRTALQ 1811
MAS NA++SASIL+ P + SL ++ + ++NYR RF V+A+AKEIAF Q SR+A+Q
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYRKPNNRFSVKASAKEIAFDQHSRSAMQ 60
Query: 1810 AGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALIREVA 1631
AGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALIREVA
Sbjct: 61 AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120
Query: 1630 SKTNDSAGDGTTTASVLAREIIKLGLLTVTSGANPVSIKKGIDKTVQGLVAELERKARSI 1451
SKTNDSAGDGTTTASVLAREIIKLGLL+VTSGANPVS+K+GIDKTVQGLV ELE+KAR +
Sbjct: 121 SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180
Query: 1450 KGSDDVKAVATISAGNDEVIGLMIADAIDKVGSDGVLSIESSSSFETTVDVEEGMEIDRG 1271
KG DD+KAVA+ISAGNDE+IG MIA+AIDKVG DGVLSIESSSSFETTV+VEEGMEIDRG
Sbjct: 181 KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240
Query: 1270 YISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRVPLLIIAEDVTGEA 1091
YISPQFVTNPEKLI EFENA+VL+TDQKIS+IKDIIPLLEKTTQLR PLLIIAEDVTGEA
Sbjct: 241 YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300
Query: 1090 LATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTEVEQLG 911
LATLVVNKLRGI+NVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+ENT VEQLG
Sbjct: 301 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360
Query: 910 IARKVTITKDSTTIIADAASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGVAV 731
+ARK+TI+KDSTT+IADAA+KDE+QAR+AQ+KKELS+TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361 LARKITISKDSTTVIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420
Query: 730 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKDKLEDADE 551
IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPAIKDKLEDADE
Sbjct: 421 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPAIKDKLEDADE 480
Query: 550 RLGADIVQKALVAPASLIAHNAXXXXXXXXEKIKASEWEIGYNAMTDTYENLMEAGVIDP 371
RLGADIVQKAL+APA+LIA NA EKIK+ EWE+GYNAM D YENL+EAGVIDP
Sbjct: 481 RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMADRYENLVEAGVIDP 540
Query: 370 AKVTRCALQNAASVAGMVLTTQAIVVE 290
AKVTRCALQNAASVAGMVLTTQAIVVE
Sbjct: 541 AKVTRCALQNAASVAGMVLTTQAIVVE 567
>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 922 bits (2383), Expect = 0.0
Identities = 491/569 (86%), Positives = 529/569 (92%), Gaps = 2/569 (0%)
Frame = -2
Query: 1990 MASANAITSASILQFPKQASLGKKTSQRQ--KLNYRPSTTRFVVRANAKEIAFGQASRTA 1817
MA++NA+++ASIL PKQ L +K +Q+ +LN+ ST RF VRANAK+IAF Q SR A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRKGNQQHNSRLNFGQSTRRFAVRANAKDIAFDQDSRAA 60
Query: 1816 LQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALIRE 1637
LQ+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 1636 VASKTNDSAGDGTTTASVLAREIIKLGLLTVTSGANPVSIKKGIDKTVQGLVAELERKAR 1457
VASKTNDSAGDGTTTASVLAREIIKLGLL+VTSGANPVSIKKGIDKTVQGLV ELE++AR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRAR 180
Query: 1456 SIKGSDDVKAVATISAGNDEVIGLMIADAIDKVGSDGVLSIESSSSFETTVDVEEGMEID 1277
+KG DD+KAVATISAGNDE+IG MIADAIDKVG DGVLSIESSSSFETTV+VEEGMEID
Sbjct: 181 PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID 240
Query: 1276 RGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRVPLLIIAEDVTG 1097
RGYISPQFVTNPEKLI FENA+VLVTDQKIS+IKDIIPLLEKTTQLR PLLIIAEDVTG
Sbjct: 241 RGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300
Query: 1096 EALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTEVEQ 917
EALATLVVNKLRGI+NV+AIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IENT +EQ
Sbjct: 301 EALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 916 LGIARKVTITKDSTTIIADAASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGV 737
LG+ARKVTI+KDSTTIIADAASKDE+QARIAQ+KKELSETDSVYDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 736 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKDKLEDA 557
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAIK+K++DA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIKDA 480
Query: 556 DERLGADIVQKALVAPASLIAHNAXXXXXXXXEKIKASEWEIGYNAMTDTYENLMEAGVI 377
DERLGADIVQKALVAPASLIA NA EK+K SEWE+GYNAMTD YENL+EAGVI
Sbjct: 481 DERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAMTDKYENLVEAGVI 540
Query: 376 DPAKVTRCALQNAASVAGMVLTTQAIVVE 290
DPAKVTRCALQN+ASVAGMVLTTQAIVVE
Sbjct: 541 DPAKVTRCALQNSASVAGMVLTTQAIVVE 569
>ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like isoform 1 [Glycine max]
Length = 584
Score = 921 bits (2380), Expect = 0.0
Identities = 481/567 (84%), Positives = 528/567 (93%)
Frame = -2
Query: 1990 MASANAITSASILQFPKQASLGKKTSQRQKLNYRPSTTRFVVRANAKEIAFGQASRTALQ 1811
MAS NA++SASIL+ P + SL ++ + ++NYR +RF V+A+AKEIAF Q SR+A+Q
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYRQPNSRFSVKASAKEIAFDQHSRSAMQ 60
Query: 1810 AGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALIREVA 1631
AGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALIREVA
Sbjct: 61 AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120
Query: 1630 SKTNDSAGDGTTTASVLAREIIKLGLLTVTSGANPVSIKKGIDKTVQGLVAELERKARSI 1451
SKTNDSAGDGTTTASVLAREIIKLGLL+VTSGANPVS+K+GIDKTVQGLV ELE+KAR +
Sbjct: 121 SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180
Query: 1450 KGSDDVKAVATISAGNDEVIGLMIADAIDKVGSDGVLSIESSSSFETTVDVEEGMEIDRG 1271
KG DD+KAVA+ISAGNDE+IG MIA+AIDKVG DGVLSIESSSSFETTV+VEEGMEIDRG
Sbjct: 181 KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240
Query: 1270 YISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRVPLLIIAEDVTGEA 1091
YISPQFVTNPEKLI EFENA+VL+TDQKIS+IKDIIPLLEKTTQLR PLLIIAEDVTGEA
Sbjct: 241 YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300
Query: 1090 LATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTEVEQLG 911
LATLVVNKLRGI+NVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+ENT VEQLG
Sbjct: 301 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360
Query: 910 IARKVTITKDSTTIIADAASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGVAV 731
+ARK+TI+KDSTTIIADAA+KDE+QAR+AQ+KKELS+TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361 LARKITISKDSTTIIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420
Query: 730 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKDKLEDADE 551
IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPA+KDKL+DADE
Sbjct: 421 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPALKDKLDDADE 480
Query: 550 RLGADIVQKALVAPASLIAHNAXXXXXXXXEKIKASEWEIGYNAMTDTYENLMEAGVIDP 371
RLGADIVQKAL+APA+LIA NA EKIK+ EWE+GYNAM D YENL+EAGVIDP
Sbjct: 481 RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMVDRYENLVEAGVIDP 540
Query: 370 AKVTRCALQNAASVAGMVLTTQAIVVE 290
AKVTRCALQNAASVAGMVLTTQAIVVE
Sbjct: 541 AKVTRCALQNAASVAGMVLTTQAIVVE 567