BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001592
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   162   8e-38
ref|XP_002442979.1| hypothetical protein SORBIDRAFT_08g005640 [S...   147   3e-33
ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin...   145   7e-33
gb|AFK36810.1| unknown [Lotus japonicus]                              145   1e-32
ref|XP_003578801.1| PREDICTED: DNA-directed RNA polymerases I an...   144   3e-32

>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  162 bits (410), Expect = 8e-38
 Identities = 81/105 (77%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
 Frame = -2

Query: 652 MELGTKQENS-STFSLADEDHTLANSVRFTLNQDPRVAFCGYSIPHPSDAKVNIRVQTTG 476
           ME G+  ++S STFSL+DEDHTLANS+RFTLNQDPRVAFCGYSIPHPSDA+VNIRVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 475 EKASVVFKDALQDLQFMCQHVRGTFDKAVVDYKTSKAVEGMDIEK 341
           + A  V KDA QDL  MCQHVR TFDKAVVDYK SK V+ M IEK
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSKPVKDMSIEK 105


>ref|XP_002442979.1| hypothetical protein SORBIDRAFT_08g005640 [Sorghum bicolor]
           gi|241943672|gb|EES16817.1| hypothetical protein
           SORBIDRAFT_08g005640 [Sorghum bicolor]
          Length = 108

 Score =  147 bits (370), Expect = 3e-33
 Identities = 71/104 (68%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
 Frame = -2

Query: 652 MELGTKQENSS-TFSLADEDHTLANSVRFTLNQDPRVAFCGYSIPHPSDAKVNIRVQTTG 476
           ME G+  ++SS TFS+ +EDHTLANSVRF LNQDPRVAFCGYSIPHP++ KVNIRVQTTG
Sbjct: 1   MEHGSLDDSSSSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPAENKVNIRVQTTG 60

Query: 475 EKASVVFKDALQDLQFMCQHVRGTFDKAVVDYKTSKAVEGMDIE 344
           + A  V KDALQDL  MCQH+RGT D AV D++ +K  E MDI+
Sbjct: 61  DPAKDVLKDALQDLMVMCQHIRGTLDTAVADFRGNKTAEAMDID 104


>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
           gi|255630968|gb|ACU15848.1| unknown [Glycine max]
          Length = 107

 Score =  145 bits (367), Expect = 7e-33
 Identities = 75/107 (70%), Positives = 84/107 (78%), Gaps = 4/107 (3%)
 Frame = -2

Query: 652 MELGTKQENS-STFSLADEDHTLANSVRFTLNQDPRVAFCGYSIPHPSDAKVNIRVQTTG 476
           ME G+  + S STFSL DEDHT AN+VRFTLNQDPRV+FCGYSIPHPSD +VNIRVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60

Query: 475 EKASVVFKDALQDLQFMCQHVRGTFDKAVVDYKTSKA---VEGMDIE 344
           + +  V KDA QDL  MCQHVR TFDKAV D+K SKA    E MD+E
Sbjct: 61  DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNEDMDVE 107


>gb|AFK36810.1| unknown [Lotus japonicus]
          Length = 104

 Score =  145 bits (365), Expect = 1e-32
 Identities = 70/104 (67%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
 Frame = -2

Query: 652 MELGTKQENS-STFSLADEDHTLANSVRFTLNQDPRVAFCGYSIPHPSDAKVNIRVQTTG 476
           ME G+  + S STFSL DEDHT AN++R+TLNQDPRV FCGYSIPHPSD +VNIRVQTTG
Sbjct: 1   MEHGSHSDESRSTFSLTDEDHTFANAIRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 475 EKASVVFKDALQDLQFMCQHVRGTFDKAVVDYKTSKAVEGMDIE 344
           E A  V KD+ Q +  MCQHVRGTFDKAV D+K+ K  + MDI+
Sbjct: 61  EPAREVLKDSCQHMMLMCQHVRGTFDKAVNDFKSKKGGKDMDID 104


>ref|XP_003578801.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Brachypodium distachyon]
          Length = 108

 Score =  144 bits (362), Expect = 3e-32
 Identities = 70/104 (67%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
 Frame = -2

Query: 652 MELGTKQENS-STFSLADEDHTLANSVRFTLNQDPRVAFCGYSIPHPSDAKVNIRVQTTG 476
           ME G+  +++ S+FS+ +EDHTLANSVRF LNQDPRVAFCGYSIPHP+D KVNIRVQTTG
Sbjct: 1   MEHGSVADSTASSFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTG 60

Query: 475 EKASVVFKDALQDLQFMCQHVRGTFDKAVVDYKTSKAVEGMDIE 344
           + A  V  DALQDL  MCQH RGTFD AV D++ +K +E MDI+
Sbjct: 61  DPAKDVMVDALQDLMVMCQHARGTFDTAVADFRANKPMERMDID 104