BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001583
         (1642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   367   4e-99
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   337   4e-90
ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-contain...   320   7e-85
ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...   318   3e-84
ref|XP_002308125.1| methyl binding domain protein [Populus trich...   304   4e-80

>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
            vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  367 bits (943), Expect = 4e-99
 Identities = 188/298 (63%), Positives = 216/298 (72%), Gaps = 8/298 (2%)
 Frame = -3

Query: 1166 YSNASNQLVLYNPEANGVVQIEPVCEPVVEYMXXXXXXXXXXXP-RILPSVGAFTVQCAN 990
            Y N SNQLV+Y+P AN   ++EPV +P+   +           P R+LPSVGAFTVQCAN
Sbjct: 57   YENTSNQLVVYDPVANSATEVEPVPDPIQYRLPSFTGYSTTNAPSRVLPSVGAFTVQCAN 116

Query: 989  CFKWRLIPTKEKYEEIRESILQQPFICDRAREWRPTITCDDPADISQDGSRLWAIDKPNI 810
            CFKWRLIPTKEKYEEIRE IL+QPF+C+ AREWRP ++CDDPADISQDGSRLWAIDKPNI
Sbjct: 117  CFKWRLIPTKEKYEEIREHILEQPFVCETAREWRPNVSCDDPADISQDGSRLWAIDKPNI 176

Query: 809  AQPPPGWERLLRIRGEGSTRFADVYYRAPSGKRLRSMVEINKYLEEHPEYLTAGVDTSQF 630
            AQPP GW+RLLRIRGEGST+FADVYY APSGKRLRSMVE+ KYL EHPEY+  GV  SQF
Sbjct: 177  AQPPAGWQRLLRIRGEGSTKFADVYYVAPSGKRLRSMVEVQKYLLEHPEYMVHGVTLSQF 236

Query: 629  SFQIPRPLQENYVRKRPQPPRA---DFST----TRSLEPTEVNPLSWAGPLEGPDLQLGQ 471
            SFQIP+PLQENYVRKRP    A   D +T    +R LEP EVNPLSWAGP E  DLQL  
Sbjct: 237  SFQIPKPLQENYVRKRPARVNAGSYDDTTSSGMSRPLEPGEVNPLSWAGPAECIDLQLRT 296

Query: 470  PGMSAPYNEDPISHPVTPPTKRKATRSPAKHKATKSPYKHAHNSQATSNDPNIKVESP 297
            PG+SAPY E P+  PV+ PTK+     P          +  ++S    N   +KVE P
Sbjct: 297  PGLSAPYFEAPVFDPVSRPTKQARRTLP----------RDMYDSNMVYNQQKVKVEEP 344


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
            gi|222873656|gb|EEF10787.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 343

 Score =  337 bits (865), Expect = 4e-90
 Identities = 179/354 (50%), Positives = 222/354 (62%), Gaps = 1/354 (0%)
 Frame = -3

Query: 1340 ESHSRDATPEVKKEKSEFAEYNPLNHLENTPEQSSDAALSXXXXXXXXXXXXXXEKQCYS 1161
            +SH  +    +KKE  +        HL ++ ++  + + S                Q   
Sbjct: 2    QSHPGETFHVLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSDDTWDIDD--QSIE 59

Query: 1160 NASNQLVLYNPEANGVVQIEPVCEPVVEYMXXXXXXXXXXXPRILPSVGAFTVQCANCFK 981
            ++S QLVLY+P AN   +IEPV +P++ +             R+LPSVGAFTVQCA CFK
Sbjct: 60   DSSKQLVLYDPLANDAGEIEPVPQPILSHHPFRRYSDLNVPSRVLPSVGAFTVQCAKCFK 119

Query: 980  WRLIPTKEKYEEIRESILQQPFICDRAREWRPTITCDDPADISQDGSRLWAIDKPNIAQP 801
            WRLIPTK+KYEE+RE IL++PF C+ AREWRP I+CDDP DI QDGSRLWAIDKPNIAQP
Sbjct: 120  WRLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPNIAQP 179

Query: 800  PPGWERLLRIRGEGSTRFADVYYRAPSGKRLRSMVEINKYLEEHPEYLTAGVDTSQFSFQ 621
            PPGW+RLLRIRGEGST+FADVYY+APSGKRLRSMVEI KYL EHPEY+  G+  +QFSFQ
Sbjct: 180  PPGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQFSFQ 239

Query: 620  IPRPLQENYVRKRPQPPRADFSTTRSLEPTEVNPLSWAGPLEGPDLQLGQPG-MSAPYNE 444
            IP+PLQENYVRK+   PR   S    LEP E NPL W GP +  +LQLG+P  +  P  +
Sbjct: 240  IPKPLQENYVRKK--RPRLSAS---CLEPGEANPLKWVGPGDCTELQLGRPAILPPPLIQ 294

Query: 443  DPISHPVTPPTKRKATRSPAKHKATKSPYKHAHNSQATSNDPNIKVESPQPQNN 282
                 P   P K+KA          ++P K +H +    N    KVE P    N
Sbjct: 295  SSAYLPFYWPVKKKA----------RTPSKQSHRTNPVCNLDEPKVEEPDQSRN 338


>ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Cucumis sativus]
          Length = 342

 Score =  320 bits (820), Expect = 7e-85
 Identities = 163/290 (56%), Positives = 203/290 (70%)
 Frame = -3

Query: 1172 QCYSNASNQLVLYNPEANGVVQIEPVCEPVVEYMXXXXXXXXXXXPRILPSVGAFTVQCA 993
            Q   N S +LV+Y+P A+     +PV  PV +              R+LPSVGAFTVQCA
Sbjct: 55   QSNDNPSRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNSSRVLPSVGAFTVQCA 114

Query: 992  NCFKWRLIPTKEKYEEIRESILQQPFICDRAREWRPTITCDDPADISQDGSRLWAIDKPN 813
             CFKWRLIPTKEKYEEIRE +L++PF C+ AR WRP I+CDDPADI+QDGSRLWAIDKPN
Sbjct: 115  GCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKPN 174

Query: 812  IAQPPPGWERLLRIRGEGSTRFADVYYRAPSGKRLRSMVEINKYLEEHPEYLTAGVDTSQ 633
            IAQPPPGW+RLL IRGEGST+FADVYY APSGK+LRSMV+I KYL EHPEY T GV  ++
Sbjct: 175  IAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTR 234

Query: 632  FSFQIPRPLQENYVRKRPQPPRADFSTTRSLEPTEVNPLSWAGPLEGPDLQLGQPGMSAP 453
            FSFQIP+PL+E+YVRKR     A    ++ LE  EV P+SWA P +   LQLG+PG++  
Sbjct: 235  FSFQIPKPLREDYVRKRRPNMNASCDASK-LESGEVRPISWARPDDSTALQLGKPGLTEL 293

Query: 452  YNEDPISHPVTPPTKRKATRSPAKHKATKSPYKHAHNSQATSNDPNIKVE 303
             +  P+++PVT P K K  R+ A+        +   +S  ++  P IK+E
Sbjct: 294  LSTSPVNNPVTRPAK-KVKRALAQ--------EMRRSSLTSTEPPAIKLE 334


>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 309

 Score =  318 bits (815), Expect = 3e-84
 Identities = 165/264 (62%), Positives = 196/264 (74%), Gaps = 5/264 (1%)
 Frame = -3

Query: 1160 NASNQLVLYNPEANGVVQIEPVCEPV-VEYMXXXXXXXXXXXPRILPSVGAFTVQCANCF 984
            + SNQLVLY+P ANG   IE   +P+  E+            PR+LPSVGAFTVQCA+CF
Sbjct: 50   DVSNQLVLYDPVANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCF 109

Query: 983  KWRLIPTKEKYEEIRESILQQPFICDRAREWRPTITCDDPADISQDGSRLWAIDKPNIAQ 804
            KWRLIPTKEKYEEIRE IL+QPF+C +AREWRP ++CDDP DISQDGSR+WAIDKPNIAQ
Sbjct: 110  KWRLIPTKEKYEEIREHILEQPFVCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQ 169

Query: 803  PPPGWERLLRIRGEGSTRFADVYYRAPSGKRLRSMVEINKYLEEHPEYLTAGVDTSQFSF 624
            PP GWERLLRIR EGS++FAD+YY APSGKRLRSMVEI K+L EHPEY   GV  SQFSF
Sbjct: 170  PPAGWERLLRIRAEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSF 229

Query: 623  QIPRPLQENYVRKRPQPPRADFSTTRSLEPTEVNPLSWAGPLEGPDLQLGQPGMSAPYNE 444
            QIPRPLQENYVRKRP    + +  +  +E  +V+PL+W  P EG   +LG P  + P+ E
Sbjct: 230  QIPRPLQENYVRKRPARLTSSYEVSEPVEHEQVSPLAWVDP-EGHGRRLGLP--APPFME 286

Query: 443  ----DPISHPVTPPTKRKATRSPA 384
                DPIS  ++ P+KR+AT   A
Sbjct: 287  SHDIDPIS--ISRPSKRQATHKGA 308


>ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa]
            gi|222854101|gb|EEE91648.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 328

 Score =  304 bits (779), Expect = 4e-80
 Identities = 164/327 (50%), Positives = 202/327 (61%)
 Frame = -3

Query: 1340 ESHSRDATPEVKKEKSEFAEYNPLNHLENTPEQSSDAALSXXXXXXXXXXXXXXEKQCYS 1161
            +S   +    VKKE     +     HL++T ++  + + S                +   
Sbjct: 2    QSRPEETIRMVKKEADCCTDSCHTGHLQSTLQEPIEVSSSNEDNSHDTGDIDDPSIE--- 58

Query: 1160 NASNQLVLYNPEANGVVQIEPVCEPVVEYMXXXXXXXXXXXPRILPSVGAFTVQCANCFK 981
            ++S QLVLY+P  NG  QIEPV +P+                R+LPSVG FTVQCA CFK
Sbjct: 59   DSSKQLVLYDPVTNGAGQIEPVPQPIQFQRPFRRYSDPNVPSRVLPSVGTFTVQCAKCFK 118

Query: 980  WRLIPTKEKYEEIRESILQQPFICDRAREWRPTITCDDPADISQDGSRLWAIDKPNIAQP 801
            WRLIPTK+KYEE+RE IL++PF C+ AR WRP I+CDDP DI+QDGSRLWAIDKPNIAQP
Sbjct: 119  WRLIPTKKKYEELREHILEEPFFCETARGWRPDISCDDPTDITQDGSRLWAIDKPNIAQP 178

Query: 800  PPGWERLLRIRGEGSTRFADVYYRAPSGKRLRSMVEINKYLEEHPEYLTAGVDTSQFSFQ 621
            PPGW+RLLRIRGEGS++FADVYY++PSGKRLRSMVE+ KYL EHPEY+T GV  SQFSFQ
Sbjct: 179  PPGWQRLLRIRGEGSSKFADVYYQSPSGKRLRSMVEVQKYLIEHPEYMTYGVTLSQFSFQ 238

Query: 620  IPRPLQENYVRKRPQPPRADFSTTRSLEPTEVNPLSWAGPLEGPDLQLGQPGMSAPYNED 441
            IP+PLQENYVRKR     A    TR L+P         G  +  +LQLG+P         
Sbjct: 239  IPKPLQENYVRKRRPSISASCDYTRHLQP---------GEGDFTELQLGRPA-------- 281

Query: 440  PISHPVTPPTKRKATRSPAKHKATKSP 360
              S     P K+KA     +   T +P
Sbjct: 282  --SPSFDRPVKKKAGTQSKQDYRTANP 306