BLASTX nr result

ID: Cimicifuga21_contig00001556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001556
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244...   208   2e-51
ref|XP_002270738.1| PREDICTED: uncharacterized protein LOC100249...   201   3e-49
ref|XP_002511226.1| conserved hypothetical protein [Ricinus comm...   177   5e-42
gb|ADN33955.1| hypothetical protein [Cucumis melo subsp. melo]        171   3e-40
ref|XP_004152517.1| PREDICTED: uncharacterized protein LOC101213...   169   8e-40

>ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera]
          Length = 289

 Score =  208 bits (530), Expect = 2e-51
 Identities = 132/292 (45%), Positives = 160/292 (54%), Gaps = 45/292 (15%)
 Frame = +2

Query: 20  RGGCCTQKCAGSAYDSAKLDRIMVRFRPIAPKPAVGGS-------ENNHFVVTKPRPKRR 178
           +GGCC  + AG AYD +K+DRIM+RFRPIAPKP   GS       +++   +   R KRR
Sbjct: 4   KGGCCIARYAGGAYDMSKVDRIMLRFRPIAPKPTSAGSVSGGSTLKSDEVYLRTGRGKRR 63

Query: 179 YVRVHXXXXXXXKTKRGAVSVEKNCGLDRSESGEMVTLSLLPETPGSVKASP---SDRTI 349
           YVR +         KR A   EK    D      +VTL LLPETP     SP   SD   
Sbjct: 64  YVRDNSKRC---NRKRKASPEEKR---DEIVGEAVVTLPLLPETPDRKDWSPPGQSDLLS 117

Query: 350 ATRTLIR------------------DLPIESDRTVVM----QYTGSSVTVECVEGS---- 451
           AT+                      D  + +DRTVVM    +  GS VTVECV  +    
Sbjct: 118 ATKPQKNPPIWLSFANGSTEGHCGSDRAVITDRTVVMPQPVRLVGSCVTVECVTDTWVDG 177

Query: 452 ---EGNDVQMMIDLENDTCPGFISDGYNRVWWANQAFKSMVGLE------MVWLVMKEKF 604
                 D + + +L+ DTCPGF+SDG NRV W N A++ MVG        MVWLVMK + 
Sbjct: 178 DWLGSTDEEKINNLDRDTCPGFVSDGLNRVTWTNAAYRRMVGHVTPGPEMMVWLVMKARV 237

Query: 605 PVMCSAFVCRVRLQYTCKNERKSMVVPCDVWRMDGGDFAWRLDVQAALSLGR 760
           PV   A  CRVRLQY C  E+ S+ +PCDVWRMDGG FAWRLDV+AALSLGR
Sbjct: 238 PVTFPAITCRVRLQYRCGKEKNSLTLPCDVWRMDGGGFAWRLDVKAALSLGR 289


>ref|XP_002270738.1| PREDICTED: uncharacterized protein LOC100249110 [Vitis vinifera]
          Length = 301

 Score =  201 bits (511), Expect = 3e-49
 Identities = 133/303 (43%), Positives = 162/303 (53%), Gaps = 52/303 (17%)
 Frame = +2

Query: 8   MGGGR--GGC------CTQKCAGSAYDSAKLDRIMVRFRPIAPKPAVGGS-------ENN 142
           +GGGR   GC      C ++CAG A D+A ++RIM+RFRPIAPKPA GGS       EN 
Sbjct: 5   VGGGRMVSGCSVGEGLCMERCAGGAQDNAIINRIMLRFRPIAPKPAAGGSSSGGSTSENR 64

Query: 143 HFVVTKPRPKRRYVRVHXXXXXXXKTKRGAVSVEKNCGLDRSESGEMVTLSLLPE----- 307
           + VV + R KR+YVRV        + K+     E   GL+++    + TL LLPE     
Sbjct: 65  NVVVARGRGKRKYVRVRKYNRC--RRKKRTAEEEIRDGLEKT----VQTLQLLPEKADGS 118

Query: 308 -TPGSVKASPSDRTIATRTLIRDLPI-----------ESDRTVVMQYT----GSSVTVEC 439
            +P        +R+  T+ +    P              DR VV + T     S VTVEC
Sbjct: 119 DSPAGASWCNLERSETTKPIRETPPFWLTFNGENTWSALDRGVVREATMIVVESWVTVEC 178

Query: 440 VE-------GSEGNDVQMMIDLENDTCPGFISDGYNRVWWANQAFKSMVGLEM------- 577
           V        G    D++   +LE DTCPG ISDG NRV W N A+K MV  E+       
Sbjct: 179 VRSACMEGGGLGSTDLERRKNLEGDTCPGLISDGLNRVEWVNDAYKRMVSQEISNGRWPE 238

Query: 578 --VWLVMKEKFPVMCSAFVCRVRLQYTCKNERKSMVVPCDVWRMDGGDFAWRLDVQAALS 751
             VWLV KEK P M  AF CRVRLQYT   E+ S  VPCD WRMD G FAWRLDV+AALS
Sbjct: 239 CWVWLVAKEKLPYMYPAFTCRVRLQYTFGKEKHSQTVPCDAWRMDRGGFAWRLDVKAALS 298

Query: 752 LGR 760
           LGR
Sbjct: 299 LGR 301


>ref|XP_002511226.1| conserved hypothetical protein [Ricinus communis]
           gi|223550341|gb|EEF51828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score =  177 bits (448), Expect = 5e-42
 Identities = 117/300 (39%), Positives = 161/300 (53%), Gaps = 53/300 (17%)
 Frame = +2

Query: 17  GRGGCCTQKCAG------SAYDSAKLDRIMVRFRPIAPKPA---VGGSENNHFVVTKPRP 169
           GRGGCC  +  G      + YD + +DRIM++FRPIAPKPA       E +       R 
Sbjct: 3   GRGGCCIARYGGGGGEGSAGYDMSTIDRIMLKFRPIAPKPANTFSSSPEIDEVGSRSSRG 62

Query: 170 KRRYVRVHXXXXXXXKTKRGAVSVEKNCGLDRSESGEMVTLSLLPETPGSV-----KASP 334
           KRR  + +       + K G  + +K    +      +VTL LLPETP  +     K+ P
Sbjct: 63  KRRCNKTNGNNTNNKRCKNGNNNRKKKVLSEEKVGTAVVTLPLLPETPDLLSPKQGKSGP 122

Query: 335 SDRTIATR--------TLIRDLPIESDRTV----VMQYT-GSSVTVECV-------EGSE 454
           +  +  +         T++  + ++    V    +M+   GS VTVEC+       +G  
Sbjct: 123 TWLSFGSNNGNGTHHGTMLFGMSVDHQNVVTHPQIMRVVMGSCVTVECITDTWVNLDGLG 182

Query: 455 GNDVQMMIDLENDTCPGFISDGYNRVWWANQAFKSMVGLE--------MVWLVMKEKFPV 610
           G D +  ++LE DTCPGFISDG+ RV W N+A+K M G          +VWLVMK+K  V
Sbjct: 183 GTDEEKRMNLERDTCPGFISDGFGRVTWTNEAYKKMAGQGEDWRRGEVVVWLVMKDKVTV 242

Query: 611 MCS-------AFVCRVRLQY--TCKN--ERKSMVVPCDVWRMDGGDFAWRLDVQAALSLG 757
           M +       A+ C+VR+Q   TC+N  ER+S+ VPCDVWRMD G FAWRLDV+AALSLG
Sbjct: 243 MEAERVGNNRAWTCKVRVQNQSTCRNVKERRSITVPCDVWRMDSGGFAWRLDVKAALSLG 302


>gb|ADN33955.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 275

 Score =  171 bits (433), Expect = 3e-40
 Identities = 114/274 (41%), Positives = 146/274 (53%), Gaps = 25/274 (9%)
 Frame = +2

Query: 11  GGGRGGCCTQKCAGSAYDSAKLDRIMVRFRPIAPKPAV-GGSENNHFVVTKPRPKRRYVR 187
           G GRGGCC  +  G ++D +K+DRIM+RFRPIAPKPAV  GS +      K     R  R
Sbjct: 3   GNGRGGCCIARYVGPSHDMSKVDRIMLRFRPIAPKPAVSSGSASADSTPEKSEGTGRTGR 62

Query: 188 VHXXXXXXXKTKRGAVSVEKNCGLDRSESGEMV-TLSLLPETPGSVKASPSDRTIATRTL 364
                     TKR     +K+   D      +V TL LLPE P  VK    +  +     
Sbjct: 63  GKKRSNRDTGTKRCNNRRKKSVANDDVLGSSVVTTLPLLPEMPDCVKREGRNAPV----W 118

Query: 365 IRDLPIESDRTVV--------MQYTGSSVTVECV------EGSE--GNDVQMMIDLENDT 496
           +    ++ ++TVV        ++   SSV VE V      EG E    D +   +LE DT
Sbjct: 119 LSFGGVKENQTVVSAVAVPQAVRMVASSVIVESVAEITWGEGEELGCTDEERRRNLERDT 178

Query: 497 CPGFISDGYNRVWWANQAFKSMVG-----LEMVWLVMKEKFPVMCSAFVCRVRLQYTCK- 658
           CPGFISDG  +V W N+A++ MVG        VWL +KE+      AF CRV++QY  + 
Sbjct: 179 CPGFISDGGGKVTWTNEAYREMVGGTAGDAVRVWLELKERTEEWWPAFTCRVKVQYRSRW 238

Query: 659 -NERKSMVVPCDVWRMDGGDFAWRLDVQAALSLG 757
             ER S+  PCD WRMDGG FAWRLDV+AALSLG
Sbjct: 239 GKERSSLTAPCDAWRMDGGGFAWRLDVKAALSLG 272


>ref|XP_004152517.1| PREDICTED: uncharacterized protein LOC101213560 [Cucumis sativus]
          Length = 277

 Score =  169 bits (429), Expect = 8e-40
 Identities = 111/279 (39%), Positives = 145/279 (51%), Gaps = 32/279 (11%)
 Frame = +2

Query: 17  GRGGCCTQKCAGSAYDSAKLDRIMVRFRPIAPKPAVGGS--------ENNHFVVTKPRPK 172
           GRGGCC  +  G ++D +K+DRIM+RFRPIAPKPAV           E +       R K
Sbjct: 5   GRGGCCIARYVGPSHDMSKVDRIMLRFRPIAPKPAVSSGSASADSTPEKSEVTGRVGRGK 64

Query: 173 RRYVRVHXXXXXXXKTKRGAVSVEKNCGLDRSESGEMVTLSLLPETPGSVKASPSDRTIA 352
           +R  R         + K+ +V  +   G     S  + TL LLPE P  VK    +  + 
Sbjct: 65  KRCNRDTGTKRCNNRRKKSSVGNDAVLG-----SSVVTTLPLLPEMPDCVKREGRNAPV- 118

Query: 353 TRTLIRDLPIESDRTVV---------MQYTGSSVTVECV------EGSE--GNDVQMMID 481
               +    ++ DRTVV         ++   SSV VE V      EG E    D +   +
Sbjct: 119 ---WLSFEGVKEDRTVVSSAVAVPQAVRMVASSVIVERVAEITWGEGEELGCTDEERRRN 175

Query: 482 LENDTCPGFISDGYNRVWWANQAFKSMVG-----LEMVWLVMKEKFPVMCSAFVCRVRLQ 646
           LE DTCPGFISDG  +V W N+A++ MVG        +WL +KE       AF CRV++Q
Sbjct: 176 LERDTCPGFISDGGGKVTWTNEAYREMVGGTAGDAVRIWLELKETTEEWWPAFTCRVKVQ 235

Query: 647 YTCK--NERKSMVVPCDVWRMDGGDFAWRLDVQAALSLG 757
           Y  +   E+ S+  PCD WRMDGG FAWRLDV+AALSLG
Sbjct: 236 YRSRWGKEKSSLTAPCDAWRMDGGGFAWRLDVKAALSLG 274


Top