BLASTX nr result

ID: Cimicifuga21_contig00001554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001554
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...   362   6e-98
ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [S...   353   3e-95
ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g...   353   4e-95
ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g...   353   5e-95
dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]    348   9e-94

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
            vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
            product [Vitis vinifera]
          Length = 287

 Score =  362 bits (930), Expect = 6e-98
 Identities = 183/237 (77%), Positives = 202/237 (85%)
 Frame = -3

Query: 1022 FHLLNQEILRVTTLLGNASLLDQSGLEHASPLTSGGLFSNGGGADINGWTSPFQSESYDM 843
            + LLNQEILRVTTLLGNAS+LDQSGLEHASPL SGG+FSNGG A++NGW SPFQSE   +
Sbjct: 60   YRLLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGG-ANVNGWASPFQSEMSGL 118

Query: 842  QRXXXXXXXXXXXXXXXXXXXXXLVVKKTLRVDIPVDKYPTYNFVGRLLGPRGNSLKRVE 663
                                    +VK+T+RVDIPV+K+P+YNFVGRLLGPRGNSLKR+E
Sbjct: 119  SAAQNWLGSQGSSSGL--------IVKRTIRVDIPVEKFPSYNFVGRLLGPRGNSLKRME 170

Query: 662  ANTECRVLIRGHGSIKDPVREDMMRGKPGYEHLNEPLHIVVEAELPVEIIDARLMKAREI 483
            A TECRVLIRG GSIKDP RE+MMRGKPGYEHLNEPLHI+VEAELPVEI+DARLM+AREI
Sbjct: 171  ATTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREI 230

Query: 482  LEDLLKPVDECQDFFKKQQLRELAMLNGTLRDEGSHMTGSVSPFHNSLGMKRAKTRG 312
            LEDLLKPVDE QDFFKKQQLRELAMLNGTLR+EGSHM+GSVSPFHNSLGMKRAKTRG
Sbjct: 231  LEDLLKPVDESQDFFKKQQLRELAMLNGTLREEGSHMSGSVSPFHNSLGMKRAKTRG 287


>ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [Sorghum bicolor]
            gi|241934199|gb|EES07344.1| hypothetical protein
            SORBIDRAFT_04g029520 [Sorghum bicolor]
          Length = 286

 Score =  353 bits (907), Expect = 3e-95
 Identities = 181/235 (77%), Positives = 196/235 (83%)
 Frame = -3

Query: 1016 LLNQEILRVTTLLGNASLLDQSGLEHASPLTSGGLFSNGGGADINGWTSPFQSESYDMQR 837
            LLNQEILRV+TLL NASLL+QSGLEH SPLT+GGL+SNG   D+NGWTS FQSES     
Sbjct: 62   LLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNGWTSAFQSES----- 116

Query: 836  XXXXXXXXXXXXXXXXXXXXXLVVKKTLRVDIPVDKYPTYNFVGRLLGPRGNSLKRVEAN 657
                                 L+VKKT++VDIPVDKYPTYNFVGR+LGPRGNSLKRVEAN
Sbjct: 117  -----SPAYSWLGGSQGSSSGLIVKKTMKVDIPVDKYPTYNFVGRILGPRGNSLKRVEAN 171

Query: 656  TECRVLIRGHGSIKDPVREDMMRGKPGYEHLNEPLHIVVEAELPVEIIDARLMKAREILE 477
            T+CRVLIRG GSIKDP RE+MMRGKPGYEHLNEPLHI+VEAELPVEIIDARLM+AREILE
Sbjct: 172  TDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILE 231

Query: 476  DLLKPVDECQDFFKKQQLRELAMLNGTLRDEGSHMTGSVSPFHNSLGMKRAKTRG 312
            DLLKPVDE QDFFKKQQLRELAMLNGTLR+EG   +GS SPFHNSLGMKRAKTRG
Sbjct: 232  DLLKPVDESQDFFKKQQLRELAMLNGTLREEGMQRSGSASPFHNSLGMKRAKTRG 286


>ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine max]
          Length = 292

 Score =  353 bits (906), Expect = 4e-95
 Identities = 181/237 (76%), Positives = 199/237 (83%)
 Frame = -3

Query: 1022 FHLLNQEILRVTTLLGNASLLDQSGLEHASPLTSGGLFSNGGGADINGWTSPFQSESYDM 843
            F LLNQEILRVTTL+GNAS+L QSGLEHASPL +GG+FSNGG AD+NGW S FQSE    
Sbjct: 62   FRLLNQEILRVTTLMGNASVLGQSGLEHASPLATGGIFSNGG-ADVNGWASRFQSE---- 116

Query: 842  QRXXXXXXXXXXXXXXXXXXXXXLVVKKTLRVDIPVDKYPTYNFVGRLLGPRGNSLKRVE 663
             R                     ++VKKT+RVDIPVD YP +NFVGRLLGPRGNSLKRVE
Sbjct: 117  -RPSLLQSSSTQSWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVE 175

Query: 662  ANTECRVLIRGHGSIKDPVREDMMRGKPGYEHLNEPLHIVVEAELPVEIIDARLMKAREI 483
            A+TECRVLIRG GSIKDP RE+MMRGKPGYEHLNEPLHI+VEAELPVEI+DARLM+AR+I
Sbjct: 176  ASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQARDI 235

Query: 482  LEDLLKPVDECQDFFKKQQLRELAMLNGTLRDEGSHMTGSVSPFHNSLGMKRAKTRG 312
            LEDLLKPVDE QDF+KKQQLRELAMLNGTLR+EGS M+GSVSPFHNSLGMKRAKTRG
Sbjct: 236  LEDLLKPVDESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 292


>ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine max]
          Length = 291

 Score =  353 bits (905), Expect = 5e-95
 Identities = 181/237 (76%), Positives = 198/237 (83%)
 Frame = -3

Query: 1022 FHLLNQEILRVTTLLGNASLLDQSGLEHASPLTSGGLFSNGGGADINGWTSPFQSESYDM 843
            F L NQEILRVTTL+GNAS+L QSGLEHASPL +GG+FSNGG AD+NGW S FQSE    
Sbjct: 61   FRLFNQEILRVTTLMGNASVLGQSGLEHASPLATGGIFSNGG-ADVNGWASRFQSE---- 115

Query: 842  QRXXXXXXXXXXXXXXXXXXXXXLVVKKTLRVDIPVDKYPTYNFVGRLLGPRGNSLKRVE 663
             R                     ++VKKT+RVDIPVD YP +NFVGRLLGPRGNSLKRVE
Sbjct: 116  -RPSLLQSSSTQNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVE 174

Query: 662  ANTECRVLIRGHGSIKDPVREDMMRGKPGYEHLNEPLHIVVEAELPVEIIDARLMKAREI 483
            A+TECRVLIRG GSIKDP RE+MMRGKPGYEHLNEPLHI+VEAELPVEI+DARLM+AREI
Sbjct: 175  ASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREI 234

Query: 482  LEDLLKPVDECQDFFKKQQLRELAMLNGTLRDEGSHMTGSVSPFHNSLGMKRAKTRG 312
            LEDLLKPVDE QDF+KKQQLRELAMLNGTLR+EGS M+GSVSPFHNSLGMKRAKTRG
Sbjct: 235  LEDLLKPVDESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 291


>dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 287

 Score =  348 bits (894), Expect = 9e-94
 Identities = 179/235 (76%), Positives = 193/235 (82%)
 Frame = -3

Query: 1016 LLNQEILRVTTLLGNASLLDQSGLEHASPLTSGGLFSNGGGADINGWTSPFQSESYDMQR 837
            LLNQEILRV+TLL NASLL+QSG EH SPLTSGGL+SNG   D+NGWTS FQSES     
Sbjct: 62   LLNQEILRVSTLLENASLLNQSGFEHGSPLTSGGLYSNGAATDMNGWTSAFQSESSSAA- 120

Query: 836  XXXXXXXXXXXXXXXXXXXXXLVVKKTLRVDIPVDKYPTYNFVGRLLGPRGNSLKRVEAN 657
                                 L+ KKT+RVDIPVDKYPTYNFVGR+LGPRGNSLKRVEA 
Sbjct: 121  --------YSWLGGSQGSSSGLIGKKTMRVDIPVDKYPTYNFVGRILGPRGNSLKRVEAT 172

Query: 656  TECRVLIRGHGSIKDPVREDMMRGKPGYEHLNEPLHIVVEAELPVEIIDARLMKAREILE 477
            T+CRVLIRG GSIKDP REDMMRGKPGYEHLNEPLHI+VEAELPVEIIDARLM+AREILE
Sbjct: 173  TDCRVLIRGRGSIKDPAREDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILE 232

Query: 476  DLLKPVDECQDFFKKQQLRELAMLNGTLRDEGSHMTGSVSPFHNSLGMKRAKTRG 312
            DLL+P+DE QDFFKKQQLRELAMLNGTLR+EG   +GS SPFHNSLGMKRAKTRG
Sbjct: 233  DLLRPMDESQDFFKKQQLRELAMLNGTLREEGMQRSGSASPFHNSLGMKRAKTRG 287


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