BLASTX nr result

ID: Cimicifuga21_contig00001531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001531
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      392   e-107
gb|AFK40061.1| unknown [Medicago truncatula]                          392   e-107
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   392   e-107
ref|XP_002302798.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein ...   391   e-107

>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  392 bits (1008), Expect = e-107
 Identities = 188/193 (97%), Positives = 192/193 (99%)
 Frame = -3

Query: 580 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 401
           EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 132

Query: 400 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPG 221
           KAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPG
Sbjct: 133 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 192

Query: 220 GSFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 41
           GSFDPL LA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 193 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

Query: 40  NNAWAYATNFVPG 2
           NNAWAYATNFVPG
Sbjct: 253 NNAWAYATNFVPG 265


>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score =  392 bits (1008), Expect = e-107
 Identities = 188/193 (97%), Positives = 192/193 (99%)
 Frame = -3

Query: 580 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 401
           EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 132

Query: 400 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPG 221
           KAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPG
Sbjct: 133 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 192

Query: 220 GSFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 41
           GSFDPL LA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 193 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

Query: 40  NNAWAYATNFVPG 2
           NNAWAYATNFVPG
Sbjct: 253 NNAWAYATNFVPG 265


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  392 bits (1008), Expect = e-107
 Identities = 188/193 (97%), Positives = 191/193 (98%)
 Frame = -3

Query: 580 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 401
           EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 400 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPG 221
           KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEV DP+YPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPG 193

Query: 220 GSFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 41
           GSFDPL LA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 40  NNAWAYATNFVPG 2
           NNAWAYATNFVPG
Sbjct: 254 NNAWAYATNFVPG 266


>ref|XP_002302798.1| predicted protein [Populus trichocarpa] gi|222844524|gb|EEE82071.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  392 bits (1006), Expect = e-107
 Identities = 186/193 (96%), Positives = 191/193 (98%)
 Frame = -3

Query: 580 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 401
           EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 132

Query: 400 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPG 221
           KAGAQIFSEGGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AGGPLGEV DPLYPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPG 192

Query: 220 GSFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 41
           GSFDPL LA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 193 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

Query: 40  NNAWAYATNFVPG 2
           NNAWAYATNFVPG
Sbjct: 253 NNAWAYATNFVPG 265


>gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
          Length = 267

 Score =  391 bits (1005), Expect = e-107
 Identities = 187/193 (96%), Positives = 191/193 (98%)
 Frame = -3

Query: 580 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 401
           EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 133

Query: 400 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPG 221
           KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGE+ DPLYPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEITDPLYPG 193

Query: 220 GSFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 41
           GSFDPL LAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVN
Sbjct: 194 GSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253

Query: 40  NNAWAYATNFVPG 2
           NNAW+YATNFVPG
Sbjct: 254 NNAWSYATNFVPG 266


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