BLASTX nr result

ID: Cimicifuga21_contig00001524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001524
         (2454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK02672.1| predicted protein [Hordeum vulgare subsp. vulgare]    296   1e-77
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   296   2e-77
ref|XP_003563169.1| PREDICTED: uncharacterized protein LOC100842...   296   2e-77
ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [M...   293   1e-76
tpg|DAA39692.1| TPA: hypothetical protein ZEAMMB73_249765 [Zea m...   291   4e-76

>dbj|BAK02672.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 682

 Score =  296 bits (759), Expect = 1e-77
 Identities = 153/293 (52%), Positives = 207/293 (70%), Gaps = 1/293 (0%)
 Frame = +2

Query: 389  GLDRDAVEEDLEKVFKKIGDVLEVRLVKNKYS-QKNKGFAFVRFATIEQAKRAAAELNYT 565
            GL R+A+E+D+     + G+V EVRLV++    Q NKGFAF RFA + QA+ AA +L   
Sbjct: 108  GLPREAMEDDVAAALTEAGEVEEVRLVRDPAQPQLNKGFAFARFAEVWQARWAANDLRTA 167

Query: 566  QVRGKVCEVTRNNDNETLHLGNICTTWTKDTLVETLRPYELENLDDVHLIEDPKDRRKNR 745
             ++GK C + +NNDNETLHL NIC  W+K+ L E L+ +ELENL+D++LIE P  + +NR
Sbjct: 168  MIKGKACGICKNNDNETLHLRNICFDWSKEDLAEKLKTFELENLEDINLIEHPDRKGRNR 227

Query: 746  GYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADIAFAKSAVEPDDEIMSQVKSIFLDGL 925
            GYAFL+FS+H+DAVA   KLQK  L+LGT VRA I+F+ + +  DD++M +VKS+FLDGL
Sbjct: 228  GYAFLDFSSHVDAVAGFLKLQKRDLFLGTDVRAQISFS-NTISQDDKVMEKVKSVFLDGL 286

Query: 926  PPSWDELQVQEQFQKYGEIENVQLARNMPSAKRRDFGFISFKTREAALACIDAVNKDGIG 1105
            PP WDE  V+E+F K+GEI+N+QLARNM +AKR+DFGFISF TR+AAL CID VNK   G
Sbjct: 287  PPHWDEDDVREKFGKFGEIDNIQLARNMFTAKRKDFGFISFTTRQAALGCIDMVNKGRFG 346

Query: 1106 EGAQKVSVKATLRKPLQRRTASTMGGWRGYGSDNYDGWSTRSSGIARSYSNRE 1264
            EG+ K+ +KATL++P   +       W+G    +      R   I +SY +RE
Sbjct: 347  EGSGKIRMKATLQRP---KPTFKKPSWQG----DTHMLGVRRGFIGKSYGDRE 392


>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
            gi|297734640|emb|CBI16691.3| unnamed protein product
            [Vitis vinifera]
          Length = 812

 Score =  296 bits (758), Expect = 2e-77
 Identities = 141/258 (54%), Positives = 190/258 (73%)
 Frame = +2

Query: 386  GGLDRDAVEEDLEKVFKKIGDVLEVRLVKNKYSQKNKGFAFVRFATIEQAKRAAAELNYT 565
            GGLD+DA E+DL KVF ++G+V EVRL+ N  ++KNKGFAF+RFAT+EQAKRA  EL   
Sbjct: 237  GGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELKNP 296

Query: 566  QVRGKVCEVTRNNDNETLHLGNICTTWTKDTLVETLRPYELENLDDVHLIEDPKDRRKNR 745
             V GK C VT + D++TL LGNIC TWTK+ L E L+ Y +EN++D+ L+ED  +   NR
Sbjct: 297  VVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVEDSNNEGMNR 356

Query: 746  GYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADIAFAKSAVEPDDEIMSQVKSIFLDGL 925
            G+AFL FS+  DA+ A  +LQK  +  G    A ++FA S ++P DEIM+QVK++F+DGL
Sbjct: 357  GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQVKTVFIDGL 416

Query: 926  PPSWDELQVQEQFQKYGEIENVQLARNMPSAKRRDFGFISFKTREAALACIDAVNKDGIG 1105
            P SWDE +V+E  +KYGEIE ++LARNMPSAKR+DFGF++F T +AA+ C  ++N   +G
Sbjct: 417  PASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELG 476

Query: 1106 EGAQKVSVKATLRKPLQR 1159
            EG  K  V+A L +PLQR
Sbjct: 477  EGENKAKVRARLSRPLQR 494


>ref|XP_003563169.1| PREDICTED: uncharacterized protein LOC100842213 [Brachypodium
            distachyon]
          Length = 691

 Score =  296 bits (757), Expect = 2e-77
 Identities = 155/294 (52%), Positives = 208/294 (70%), Gaps = 3/294 (1%)
 Frame = +2

Query: 389  GLDRDAVEEDLEKVFKKIGDVLEVRLVKNKYS-QKNKGFAFVRFATIEQAKRAAAELNYT 565
            GL  +AVEE++     + G+V EVRLV++    Q NKGFAFVRFA + QA+ AA +L   
Sbjct: 116  GLPPEAVEENVAGALAEAGEVEEVRLVRDPAEPQLNKGFAFVRFAEVWQARWAADDLRTA 175

Query: 566  QVRGKVCEVTRNNDNETLHLGNICTTWTKDTLVETLRPYELENLDDVHLIEDPKDRRKNR 745
            +++GK C + +NNDNETLHL NIC  W+KD L E L+ +ELENL+D++LIE P  + KNR
Sbjct: 176  KIKGKACGICKNNDNETLHLRNICFDWSKDDLAENLKTFELENLEDINLIEHPDRKGKNR 235

Query: 746  GYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADIAFAKSAVEPDDEIMSQVKSIFLDGL 925
            GYAFL+FS+H+DAVA   KLQK  LYLGT ++A I+F+ + +  DD++M +VKS+FLDGL
Sbjct: 236  GYAFLDFSSHVDAVAGFLKLQKRDLYLGTDIKAQISFS-NTISQDDKVMEKVKSVFLDGL 294

Query: 926  PPSWDELQVQEQFQKYGEIENVQLARNMPSAKRRDFGFISFKTREAALACIDAVNKDGIG 1105
            PP WDE  V+E+F K+GEI+N+QLARNM +AKR+DFGFISF TR+AA+ CID VNK   G
Sbjct: 295  PPHWDEDDVREKFGKFGEIDNIQLARNMFTAKRKDFGFISFTTRQAAIDCIDMVNKGRFG 354

Query: 1106 EGAQKVSVKATLRKPLQRRTASTMGGWRG--YGSDNYDGWSTRSSGIARSYSNR 1261
            EG+ KV +KATL++P   +       W+G  +      G+  +S G    Y NR
Sbjct: 355  EGSGKVRMKATLQRP---KPTFKKPSWQGDTHMLGVRRGFIGKSHGDREPYPNR 405


>ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
            gi|355502103|gb|AES83306.1| Heterogeneous nuclear
            ribonucleoprotein Q [Medicago truncatula]
          Length = 824

 Score =  293 bits (750), Expect = 1e-76
 Identities = 146/304 (48%), Positives = 207/304 (68%), Gaps = 5/304 (1%)
 Frame = +2

Query: 386  GGLDRDAVEEDLEKVFKKIGDVLEVRLVKNKYSQKNKGFAFVRFATIEQAKRAAAELNYT 565
            GGLD+DA E+DL KVF ++G V EVRL+ N  ++KNKGFAF+RF  +EQAKRA AEL   
Sbjct: 220  GGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAELKNP 279

Query: 566  QVRGKVCEVTRNNDNETLHLGNICTTWTKDTLVETLRPYELENLDDVHLIEDPKDRRKNR 745
             + GK C VT + D++TL+LGNIC TWTK+ L E L+ Y + N++D+ L+ED  D+  NR
Sbjct: 280  VINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDKGTNR 339

Query: 746  GYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADIAFAKSAVEPDDEIMSQVKSIFLDGL 925
            G+AFL FS+  DA+ A  +LQK  +  G    A ++FA S ++P DEIMSQVK++F+D L
Sbjct: 340  GFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVFIDAL 399

Query: 926  PPSWDELQVQEQFQKYGEIENVQLARNMPSAKRRDFGFISFKTREAALACIDAVNKDGIG 1105
            PPSWDE  V+   +KYGE+E ++LARNMP+A+R+D+GF++F + +AA+ C D++    +G
Sbjct: 400  PPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITGTELG 459

Query: 1106 EGAQKVSVKATLRKPLQRRTASTMGGW-----RGYGSDNYDGWSTRSSGIARSYSNRENR 1270
            EG +K  V+A L +PLQR     +G       RG    +   WS+R +   RS+S+R  R
Sbjct: 460  EGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPA--PRSFSSRGVR 517

Query: 1271 TVES 1282
             + S
Sbjct: 518  GIGS 521


>tpg|DAA39692.1| TPA: hypothetical protein ZEAMMB73_249765 [Zea mays]
          Length = 618

 Score =  291 bits (746), Expect = 4e-76
 Identities = 155/308 (50%), Positives = 213/308 (69%), Gaps = 14/308 (4%)
 Frame = +2

Query: 389  GLDRDAVEEDLEKVFKKIGDVLEVRLVKNKYSQK-NKGFAFVRFATIEQAKRAAAELNYT 565
            GL +DA EED+ +     GD+ EVRLV++   Q+ NKGFAFVRFA   QA+ AA +L   
Sbjct: 116  GLPQDAAEEDVAQALADAGDIEEVRLVRDPADQRLNKGFAFVRFAAAWQARWAANDLREA 175

Query: 566  QVRGKVCEVTRNNDNETLHLGNICTTWTKDTLVETLRPYELENLDDVHLIEDPKDRRKNR 745
             ++GK C + +N++ ETLHL NIC  W+KD L E L+P++LENLD ++LIE P  + KNR
Sbjct: 176  TIKGKACGICKNSETETLHLRNICFDWSKDDLAEKLKPFKLENLDRINLIEHPDRKGKNR 235

Query: 746  GYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADIAFAKSAVEPDDEIMSQVKSIFLDGL 925
            GYAFL+F TH+DAV A  KLQK  LYLGT  RA+I+F+ + +  DDEIM +VKS+FLDG+
Sbjct: 236  GYAFLDFRTHVDAVEAFVKLQKIDLYLGTDSRANISFS-NTLSQDDEIMEKVKSVFLDGV 294

Query: 926  PPSWDELQVQEQFQKYGEIENVQLARNMPSAKRRDFGFISFKTREAALACIDAVNKDGIG 1105
            PP WDE +V+E F K+GEI+++QLARNM +A R+DFGFI F  R++AL CI  VNKDG+G
Sbjct: 295  PPHWDEDKVREIFGKFGEIDSIQLARNMFTAARKDFGFIGFTARQSALDCIKMVNKDGVG 354

Query: 1106 EGAQKVSVKATLRKP-------LQRRTASTMGGWRGYGSDNYDGWSTRS------SGIAR 1246
            EG+ KV +KA+L++P        ++ ++S +G  RG+   +  G    S      S + R
Sbjct: 355  EGSGKVPIKASLQRPRHAFKKYSRQGSSSLLGVRRGFVDKSSSGRGHHSDRYRHFSPVRR 414

Query: 1247 SYSNRENR 1270
            SYS+  +R
Sbjct: 415  SYSDNHSR 422


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