BLASTX nr result

ID: Cimicifuga21_contig00001520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001520
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32689.3| unnamed protein product [Vitis vinifera]              291   2e-76
gb|ABB16993.1| unknown [Solanum tuberosum]                            288   1e-75
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C...   287   2e-75
gb|AFK48775.1| unknown [Lotus japonicus]                              286   5e-75
emb|CBI31516.3| unnamed protein product [Vitis vinifera]              286   6e-75

>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  291 bits (745), Expect = 2e-76
 Identities = 144/147 (97%), Positives = 147/147 (100%)
 Frame = +1

Query: 142 LLTVAMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIG 321
           LL+VAMGKTRGMGAGRKLKSHRRRQRWADK+YKKS+LGNEWKKPFAGSSHAKGIVLEKIG
Sbjct: 43  LLSVAMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIG 102

Query: 322 IEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIP 501
           IEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIP
Sbjct: 103 IEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIP 162

Query: 502 GVRFKVVKVSGVSLLALFKEKKEKPRS 582
           GVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 163 GVRFKVVKVSGVSLLALFKEKKEKPRS 189


>gb|ABB16993.1| unknown [Solanum tuberosum]
          Length = 142

 Score =  288 bits (738), Expect = 1e-75
 Identities = 142/142 (100%), Positives = 142/142 (100%)
 Frame = +1

Query: 157 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 336
           MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 337 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 516
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 517 VVKVSGVSLLALFKEKKEKPRS 582
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
           gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
          Length = 142

 Score =  287 bits (735), Expect = 2e-75
 Identities = 141/142 (99%), Positives = 142/142 (100%)
 Frame = +1

Query: 157 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 336
           MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 337 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 516
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 517 VVKVSGVSLLALFKEKKEKPRS 582
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>gb|AFK48775.1| unknown [Lotus japonicus]
          Length = 142

 Score =  286 bits (732), Expect = 5e-75
 Identities = 141/142 (99%), Positives = 141/142 (99%)
 Frame = +1

Query: 157 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 336
           MGKTRGMGA RKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 337 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 516
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 517 VVKVSGVSLLALFKEKKEKPRS 582
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>emb|CBI31516.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  286 bits (731), Expect = 6e-75
 Identities = 142/148 (95%), Positives = 145/148 (97%)
 Frame = +1

Query: 139 SLLTVAMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 318
           S L+ AMGKTRGMGAGRKLKSHR RQRWADK+YKKS+LGNEWKKPFAGSSHAKGIVLEKI
Sbjct: 51  SRLSAAMGKTRGMGAGRKLKSHRIRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 110

Query: 319 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 498
           GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI
Sbjct: 111 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 170

Query: 499 PGVRFKVVKVSGVSLLALFKEKKEKPRS 582
           PGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 171 PGVRFKVVKVSGVSLLALFKEKKEKPRS 198


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