BLASTX nr result

ID: Cimicifuga21_contig00001511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001511
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75612.1| hypothetical protein VITISV_022290 [Vitis vinifera]   264   6e-68
emb|CBI16894.3| unnamed protein product [Vitis vinifera]              261   5e-67
ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein ...   239   1e-60
ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein ...   239   1e-60
ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein ...   239   1e-60

>emb|CAN75612.1| hypothetical protein VITISV_022290 [Vitis vinifera]
          Length = 303

 Score =  264 bits (674), Expect = 6e-68
 Identities = 137/201 (68%), Positives = 157/201 (78%)
 Frame = +3

Query: 777  SGTKNSARTLEADVAVXXXXXXXXXXXXXXXXDQISSENVIKLIKEESGSVASEVYHISS 956
            S T+NS R  EA VAV                     E + K  K++  +   EVYHISS
Sbjct: 109  SKTENSNRPEEASVAVDMRTSKSKKAAKN------KEEKITKSSKKQVENEPDEVYHISS 162

Query: 957  VDVDSSKGMKKWINEYYQRRPGLKILQERIDEYITSHEEQEEQARKDREARAAEGGWTVV 1136
             D D SKGMKKWI EY+Q RPGLKILQ+RIDE+IT+HE +EEQARK+REARA+EGGWTVV
Sbjct: 163  GDEDCSKGMKKWIMEYHQSRPGLKILQQRIDEFITAHEAEEEQARKEREARASEGGWTVV 222

Query: 1137 VHQKGRKKTTDAESGITVGGVAQAAVVDKMGKKKSKDVGLDFYRFQKREAQRNEIMLLQS 1316
            VH KGRKKTTD+ESGI VG VAQAAV+DKMGKKKSK++GL+FYRFQ+REAQRNE+M+LQS
Sbjct: 223  VHHKGRKKTTDSESGIAVGSVAQAAVMDKMGKKKSKEIGLNFYRFQRREAQRNELMMLQS 282

Query: 1317 KFEQDKKRIQQLRAARKFRPY 1379
            KFEQDKKRIQQLRAARKFRPY
Sbjct: 283  KFEQDKKRIQQLRAARKFRPY 303


>emb|CBI16894.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  261 bits (666), Expect = 5e-67
 Identities = 136/201 (67%), Positives = 155/201 (77%)
 Frame = +3

Query: 777  SGTKNSARTLEADVAVXXXXXXXXXXXXXXXXDQISSENVIKLIKEESGSVASEVYHISS 956
            S T+NS R  E  VAV                     E   K  K++  +   EVYHISS
Sbjct: 119  SKTENSNRPEETSVAVDMRTSKSKKAAKN------KEEKFTKSSKKQVENEPDEVYHISS 172

Query: 957  VDVDSSKGMKKWINEYYQRRPGLKILQERIDEYITSHEEQEEQARKDREARAAEGGWTVV 1136
             D D SKGMKKWI EY+Q RPGLKILQ+RIDE+IT+HE +EEQARK+REARA+EGGWTVV
Sbjct: 173  GDEDCSKGMKKWIMEYHQSRPGLKILQQRIDEFITAHEAEEEQARKEREARASEGGWTVV 232

Query: 1137 VHQKGRKKTTDAESGITVGGVAQAAVVDKMGKKKSKDVGLDFYRFQKREAQRNEIMLLQS 1316
            VH KGRKKTTD+ESGI VG VAQAAV+DKMGKKKSK++GL+FYRFQ+REAQRNE+M+LQS
Sbjct: 233  VHHKGRKKTTDSESGIAVGSVAQAAVMDKMGKKKSKEIGLNFYRFQRREAQRNELMMLQS 292

Query: 1317 KFEQDKKRIQQLRAARKFRPY 1379
            KFEQDKKRIQQLRAARKFRPY
Sbjct: 293  KFEQDKKRIQQLRAARKFRPY 313


>ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like isoform
            2 [Cucumis sativus]
          Length = 261

 Score =  239 bits (611), Expect = 1e-60
 Identities = 114/149 (76%), Positives = 134/149 (89%)
 Frame = +3

Query: 933  SEVYHISSVDVDSSKGMKKWINEYYQRRPGLKILQERIDEYITSHEEQEEQARKDREARA 1112
            ++VY ISS D DSSKGMK+WI EY++ RPGL +LQ+RID+YIT+HE Q EQ +K+REA+A
Sbjct: 113  NDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQA 172

Query: 1113 AEGGWTVVVHQKGRKKTTDAESGITVGGVAQAAVVDKMGKKKSKDVGLDFYRFQKREAQR 1292
            AEGGWTVVVHQKGRKKTTDAESG+TVG VAQ ++ DKM KKK  +VGLDFYRFQ+REAQR
Sbjct: 173  AEGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQR 232

Query: 1293 NEIMLLQSKFEQDKKRIQQLRAARKFRPY 1379
            NE+M+LQSKFEQD+KRIQQLRAARKFRPY
Sbjct: 233  NEVMMLQSKFEQDRKRIQQLRAARKFRPY 261


>ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like isoform
            1 [Cucumis sativus]
          Length = 268

 Score =  239 bits (611), Expect = 1e-60
 Identities = 114/149 (76%), Positives = 134/149 (89%)
 Frame = +3

Query: 933  SEVYHISSVDVDSSKGMKKWINEYYQRRPGLKILQERIDEYITSHEEQEEQARKDREARA 1112
            ++VY ISS D DSSKGMK+WI EY++ RPGL +LQ+RID+YIT+HE Q EQ +K+REA+A
Sbjct: 120  NDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQA 179

Query: 1113 AEGGWTVVVHQKGRKKTTDAESGITVGGVAQAAVVDKMGKKKSKDVGLDFYRFQKREAQR 1292
            AEGGWTVVVHQKGRKKTTDAESG+TVG VAQ ++ DKM KKK  +VGLDFYRFQ+REAQR
Sbjct: 180  AEGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQR 239

Query: 1293 NEIMLLQSKFEQDKKRIQQLRAARKFRPY 1379
            NE+M+LQSKFEQD+KRIQQLRAARKFRPY
Sbjct: 240  NEVMMLQSKFEQDRKRIQQLRAARKFRPY 268


>ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like isoform
            2 [Cucumis sativus]
          Length = 261

 Score =  239 bits (611), Expect = 1e-60
 Identities = 114/149 (76%), Positives = 134/149 (89%)
 Frame = +3

Query: 933  SEVYHISSVDVDSSKGMKKWINEYYQRRPGLKILQERIDEYITSHEEQEEQARKDREARA 1112
            ++VY ISS D DSSKGMK+WI EY++ RPGL +LQ+RID+YIT+HE Q EQ +K+REA+A
Sbjct: 113  NDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQA 172

Query: 1113 AEGGWTVVVHQKGRKKTTDAESGITVGGVAQAAVVDKMGKKKSKDVGLDFYRFQKREAQR 1292
            AEGGWTVVVHQKGRKKTTDAESG+TVG VAQ ++ DKM KKK  +VGLDFYRFQ+REAQR
Sbjct: 173  AEGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQR 232

Query: 1293 NEIMLLQSKFEQDKKRIQQLRAARKFRPY 1379
            NE+M+LQSKFEQD+KRIQQLRAARKFRPY
Sbjct: 233  NEVMMLQSKFEQDRKRIQQLRAARKFRPY 261


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