BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001504
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...   254   1e-65
emb|CBI21840.3| unnamed protein product [Vitis vinifera]              236   5e-60
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   236   5e-60
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   236   5e-60
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   228   8e-58

>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score =  254 bits (649), Expect = 1e-65
 Identities = 125/221 (56%), Positives = 165/221 (74%), Gaps = 6/221 (2%)
 Frame = -1

Query: 648 LLYSTETLASTP------KPERDSLYRRISPIGDPRVSIVPILDQWIEEGKTVEKEDLTG 487
           L YST   +S        K   + LYRRISP+GDP+VSIVPILDQWIEEGK+V K+ L  
Sbjct: 27  LFYSTTPTSSQKWFRERGKDNLNQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQV 86

Query: 486 MIKKYKSFKRYTHALEISQWMSDRRCIILSPGDMVVRLDLISKVRGIEQAKKYFDNIPKQ 307
            IK+ +  KRYTHALEIS WMSD+R   L+  D+ +RLDL+SKV GIEQA+KYF+N+P++
Sbjct: 87  FIKELRYCKRYTHALEISMWMSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQK 146

Query: 306 YKDSKIYNGLLNCYAHWKSIEKAEALMQQMRELGFAGSSVAYNALLNLYFKVGPYEKIDT 127
            K  ++YN LLNCYA+ KS++KAEA+MQ MR+LGFAG ++ YN +LNL+++ G ++K++ 
Sbjct: 147 LKVLEVYNALLNCYAYAKSVDKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEA 206

Query: 126 IMEEMKEMGIVPDKFTFRTQLSAYAATSDIDRMETVLQRME 4
           +M EM+E GI  D+FT   QLSAYAA  DI RME ++ RME
Sbjct: 207 LMLEMEENGIAYDRFTLGIQLSAYAAICDIQRMEKIMSRME 247


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  236 bits (601), Expect = 5e-60
 Identities = 117/228 (51%), Positives = 168/228 (73%)
 Frame = -1

Query: 687 ALPRPSFSRVFRVLLYSTETLASTPKPERDSLYRRISPIGDPRVSIVPILDQWIEEGKTV 508
           A+   S SRVFRVL YSTETL S    E  SL  RISP  D RVSIVP L+QW +EG+++
Sbjct: 8   AVDTSSISRVFRVLPYSTETLTSNAPKE--SLQSRISPAIDLRVSIVPALEQWRKEGRSI 65

Query: 507 EKEDLTGMIKKYKSFKRYTHALEISQWMSDRRCIILSPGDMVVRLDLISKVRGIEQAKKY 328
           +++DL  +I+K ++FKRY HALEI +W+ D+    +SPGD+ ++LDLISKV G+EQA+KY
Sbjct: 66  KQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKY 125

Query: 327 FDNIPKQYKDSKIYNGLLNCYAHWKSIEKAEALMQQMRELGFAGSSVAYNALLNLYFKVG 148
           F+  P   +  ++Y  LLNCY+  KS+EKAEA+MQ+MR++GF   +++YN +L LY ++G
Sbjct: 126 FNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFV-KTLSYNVMLGLYSRLG 184

Query: 147 PYEKIDTIMEEMKEMGIVPDKFTFRTQLSAYAATSDIDRMETVLQRME 4
            +EK+D +M+EM+E GI  D FT+  +L+AY ATSD++ ME +L ++E
Sbjct: 185 KHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLE 232


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  236 bits (601), Expect = 5e-60
 Identities = 117/228 (51%), Positives = 168/228 (73%)
 Frame = -1

Query: 687 ALPRPSFSRVFRVLLYSTETLASTPKPERDSLYRRISPIGDPRVSIVPILDQWIEEGKTV 508
           A+   S SRVFRVL YSTETL S    E  SL  RISP  D RVSIVP L+QW +EG+++
Sbjct: 8   AVDTSSISRVFRVLPYSTETLTSNAPKE--SLQSRISPAIDLRVSIVPALEQWRKEGRSI 65

Query: 507 EKEDLTGMIKKYKSFKRYTHALEISQWMSDRRCIILSPGDMVVRLDLISKVRGIEQAKKY 328
           +++DL  +I+K ++FKRY HALEI +W+ D+    +SPGD+ ++LDLISKV G+EQA+KY
Sbjct: 66  KQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKY 125

Query: 327 FDNIPKQYKDSKIYNGLLNCYAHWKSIEKAEALMQQMRELGFAGSSVAYNALLNLYFKVG 148
           F+  P   +  ++Y  LLNCY+  KS+EKAEA+MQ+MR++GF   +++YN +L LY ++G
Sbjct: 126 FNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFV-KTLSYNVMLGLYSRLG 184

Query: 147 PYEKIDTIMEEMKEMGIVPDKFTFRTQLSAYAATSDIDRMETVLQRME 4
            +EK+D +M+EM+E GI  D FT+  +L+AY ATSD++ ME +L ++E
Sbjct: 185 KHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLE 232


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  236 bits (601), Expect = 5e-60
 Identities = 117/228 (51%), Positives = 168/228 (73%)
 Frame = -1

Query: 687 ALPRPSFSRVFRVLLYSTETLASTPKPERDSLYRRISPIGDPRVSIVPILDQWIEEGKTV 508
           A+   S SRVFRVL YSTETL S    E  SL  RISP  D RVSIVP L+QW +EG+++
Sbjct: 8   AVDTSSISRVFRVLPYSTETLTSNAPKE--SLQSRISPAIDLRVSIVPALEQWRKEGRSI 65

Query: 507 EKEDLTGMIKKYKSFKRYTHALEISQWMSDRRCIILSPGDMVVRLDLISKVRGIEQAKKY 328
           +++DL  +I+K ++FKRY HALEI +W+ D+    +SPGD+ ++LDLISKV G+EQA+KY
Sbjct: 66  KQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKY 125

Query: 327 FDNIPKQYKDSKIYNGLLNCYAHWKSIEKAEALMQQMRELGFAGSSVAYNALLNLYFKVG 148
           F+  P   +  ++Y  LLNCY+  KS+EKAEA+MQ+MR++GF   +++YN +L LY ++G
Sbjct: 126 FNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFV-KTLSYNVMLGLYSRLG 184

Query: 147 PYEKIDTIMEEMKEMGIVPDKFTFRTQLSAYAATSDIDRMETVLQRME 4
            +EK+D +M+EM+E GI  D FT+  +L+AY ATSD++ ME +L ++E
Sbjct: 185 KHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLE 232


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  228 bits (582), Expect = 8e-58
 Identities = 107/236 (45%), Positives = 168/236 (71%)
 Frame = -1

Query: 711 MKLVPSPNALPRPSFSRVFRVLLYSTETLASTPKPERDSLYRRISPIGDPRVSIVPILDQ 532
           MKL+ S   +   +F   F V  YST          +D+LYRRISP+GDP +S+ P+LDQ
Sbjct: 1   MKLLQSLKPINLIAFRSEF-VNFYSTVV--------KDNLYRRISPVGDPNISVTPLLDQ 51

Query: 531 WIEEGKTVEKEDLTGMIKKYKSFKRYTHALEISQWMSDRRCIILSPGDMVVRLDLISKVR 352
           W+ EG+ V++++L  +IK+ + +KR+ HALEIS+WMSD+R   LS  D+ +R++LI +V 
Sbjct: 52  WVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVH 111

Query: 351 GIEQAKKYFDNIPKQYKDSKIYNGLLNCYAHWKSIEKAEALMQQMRELGFAGSSVAYNAL 172
           G+EQ + YFDN+P Q K  +++  LLNCYAH K ++KA A MQ+++E+GFA S + YN +
Sbjct: 112 GLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIM 171

Query: 171 LNLYFKVGPYEKIDTIMEEMKEMGIVPDKFTFRTQLSAYAATSDIDRMETVLQRME 4
           +NLY ++G +E++D++++EMKE G+  D+FT+  ++SAYAA SD   +E ++++ME
Sbjct: 172 MNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQME 227