BLASTX nr result

ID: Cimicifuga21_contig00001498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001498
         (2637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloproteas...   189   3e-45
emb|CBI27574.3| unnamed protein product [Vitis vinifera]              189   3e-45
emb|CAN69873.1| hypothetical protein VITISV_030608 [Vitis vinifera]   189   3e-45
ref|XP_002514945.1| ATP binding protein, putative [Ricinus commu...   187   2e-44
ref|XP_004167498.1| PREDICTED: katanin p60 ATPase-containing sub...   184   1e-43

>ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic
            [Vitis vinifera]
          Length = 516

 Score =  189 bits (480), Expect = 3e-45
 Identities = 89/114 (78%), Positives = 103/114 (90%)
 Frame = +3

Query: 756  HPATFDTLSMDTDLKKEVLEDLDRFVKRREFYKRVGKPWKRGYLLYGPPGTGKSSLIAAM 935
            HP TFDTL+MD  LKKE++ DLDRFV+RREFY++VGK WKRGYLLYGPPGTGKSSLIAAM
Sbjct: 217  HPCTFDTLAMDPTLKKELIADLDRFVRRREFYQKVGKAWKRGYLLYGPPGTGKSSLIAAM 276

Query: 936  ANYLKFNIYDLELASIYNNSELHRLLVATANRSILVIEDIDCSVQMQDRATSGE 1097
            ANYLKFNIYDLEL S++NNS+L RLLV+TANRSILVIEDIDCSV++Q+R    +
Sbjct: 277  ANYLKFNIYDLELTSLWNNSDLRRLLVSTANRSILVIEDIDCSVELQNRQNGSD 330



 Score =  161 bits (407), Expect = 1e-36
 Identities = 74/104 (71%), Positives = 86/104 (82%)
 Frame = +2

Query: 1382 QLTLSGILNFIDGLWSSCGDERIIVFTTNQKDRFDPALLRPGRMDMHIHMSYCTPCGFRL 1561
            QLTLSG+LNFIDGLWSSCGDERIIVFTTN K+R DPALLRPGRMDMHIHMSYCTP GF++
Sbjct: 336  QLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCTPSGFKI 395

Query: 1562 LTSNYIQIQNDPLFEEIEILLRNVNATPAELAEELMKSDDAKTA 1693
            L +NY+ I   PLF +IE L+  V  TPAE+AEEL+K ++   A
Sbjct: 396  LAANYLNINTHPLFTKIERLMTEVEVTPAEIAEELLKCEEVDVA 439


>emb|CBI27574.3| unnamed protein product [Vitis vinifera]
          Length = 623

 Score =  189 bits (480), Expect = 3e-45
 Identities = 89/114 (78%), Positives = 103/114 (90%)
 Frame = +3

Query: 756  HPATFDTLSMDTDLKKEVLEDLDRFVKRREFYKRVGKPWKRGYLLYGPPGTGKSSLIAAM 935
            HP TFDTL+MD  LKKE++ DLDRFV+RREFY++VGK WKRGYLLYGPPGTGKSSLIAAM
Sbjct: 186  HPCTFDTLAMDPTLKKELIADLDRFVRRREFYQKVGKAWKRGYLLYGPPGTGKSSLIAAM 245

Query: 936  ANYLKFNIYDLELASIYNNSELHRLLVATANRSILVIEDIDCSVQMQDRATSGE 1097
            ANYLKFNIYDLEL S++NNS+L RLLV+TANRSILVIEDIDCSV++Q+R    +
Sbjct: 246  ANYLKFNIYDLELTSLWNNSDLRRLLVSTANRSILVIEDIDCSVELQNRQNGSD 299



 Score =  161 bits (407), Expect = 1e-36
 Identities = 74/104 (71%), Positives = 86/104 (82%)
 Frame = +2

Query: 1382 QLTLSGILNFIDGLWSSCGDERIIVFTTNQKDRFDPALLRPGRMDMHIHMSYCTPCGFRL 1561
            QLTLSG+LNFIDGLWSSCGDERIIVFTTN K+R DPALLRPGRMDMHIHMSYCTP GF++
Sbjct: 305  QLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCTPSGFKI 364

Query: 1562 LTSNYIQIQNDPLFEEIEILLRNVNATPAELAEELMKSDDAKTA 1693
            L +NY+ I   PLF +IE L+  V  TPAE+AEEL+K ++   A
Sbjct: 365  LAANYLNINTHPLFTKIERLMTEVEVTPAEIAEELLKCEEVDVA 408



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 36/51 (70%), Positives = 40/51 (78%)
 Frame = +2

Query: 1382 QLTLSGILNFIDGLWSSCGDERIIVFTTNQKDRFDPALLRPGRMDMHIHMS 1534
            QL LS +LN IDGLWSSCGD++IIV     K+R DP LLRPG MDMHIHMS
Sbjct: 573  QLMLSELLNSIDGLWSSCGDKQIIVLNNYHKERLDPGLLRPGCMDMHIHMS 623


>emb|CAN69873.1| hypothetical protein VITISV_030608 [Vitis vinifera]
          Length = 492

 Score =  189 bits (480), Expect = 3e-45
 Identities = 89/114 (78%), Positives = 103/114 (90%)
 Frame = +3

Query: 756  HPATFDTLSMDTDLKKEVLEDLDRFVKRREFYKRVGKPWKRGYLLYGPPGTGKSSLIAAM 935
            HP TFDTL+MD  LKKE++ DLDRFV+RREFY++VGK WKRGYLLYGPPGTGKSSLIAAM
Sbjct: 211  HPCTFDTLAMDPTLKKELIADLDRFVRRREFYQKVGKAWKRGYLLYGPPGTGKSSLIAAM 270

Query: 936  ANYLKFNIYDLELASIYNNSELHRLLVATANRSILVIEDIDCSVQMQDRATSGE 1097
            ANYLKFNIYDLEL S++NNS+L RLLV+TANRSILVIEDIDCSV++Q+R    +
Sbjct: 271  ANYLKFNIYDLELTSLWNNSDLRRLLVSTANRSILVIEDIDCSVELQNRQNGSD 324



 Score =  159 bits (401), Expect = 5e-36
 Identities = 73/104 (70%), Positives = 85/104 (81%)
 Frame = +2

Query: 1382 QLTLSGILNFIDGLWSSCGDERIIVFTTNQKDRFDPALLRPGRMDMHIHMSYCTPCGFRL 1561
            QLTLSG+LNFIDGLWSSCGDERIIVFT N K+R DPALLRPGRMDMHIHMSYCTP GF++
Sbjct: 330  QLTLSGLLNFIDGLWSSCGDERIIVFTXNHKERLDPALLRPGRMDMHIHMSYCTPSGFKI 389

Query: 1562 LTSNYIQIQNDPLFEEIEILLRNVNATPAELAEELMKSDDAKTA 1693
            L +NY+ I   PLF +IE L+  V  TPAE+AEEL+K ++   A
Sbjct: 390  LAANYLNINTHPLFTKIERLMTEVEVTPAEIAEELLKCEEVDVA 433


>ref|XP_002514945.1| ATP binding protein, putative [Ricinus communis]
            gi|223545996|gb|EEF47499.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 503

 Score =  187 bits (474), Expect = 2e-44
 Identities = 88/109 (80%), Positives = 101/109 (92%)
 Frame = +3

Query: 756  HPATFDTLSMDTDLKKEVLEDLDRFVKRREFYKRVGKPWKRGYLLYGPPGTGKSSLIAAM 935
            HP+TFDT++MD  LK+EV++DLDRFV RREFY+RVG+PWKRGYLLYGPPGTGKSSLIAAM
Sbjct: 216  HPSTFDTIAMDPRLKQEVMDDLDRFVIRREFYRRVGRPWKRGYLLYGPPGTGKSSLIAAM 275

Query: 936  ANYLKFNIYDLELASIYNNSELHRLLVATANRSILVIEDIDCSVQMQDR 1082
            ANYLKFNIYDLEL SI +NSEL RLL +T NRSILVIEDIDCS+++QDR
Sbjct: 276  ANYLKFNIYDLELTSISSNSELRRLLTSTGNRSILVIEDIDCSIKLQDR 324



 Score =  155 bits (391), Expect = 7e-35
 Identities = 73/100 (73%), Positives = 83/100 (83%)
 Frame = +2

Query: 1382 QLTLSGILNFIDGLWSSCGDERIIVFTTNQKDRFDPALLRPGRMDMHIHMSYCTPCGFRL 1561
            QLTLSG+LNFIDGLWSSCGDE+IIVFTTN KD+ DPALLRPGRMDMHIHMSYCT  GF++
Sbjct: 335  QLTLSGLLNFIDGLWSSCGDEKIIVFTTNYKDKLDPALLRPGRMDMHIHMSYCTTSGFKI 394

Query: 1562 LTSNYIQIQNDPLFEEIEILLRNVNATPAELAEELMKSDD 1681
            L  NY++I+   LF EIE L+  V  TPAE+AEELMK  D
Sbjct: 395  LAFNYLKIKTHCLFTEIEKLIEEVEVTPAEVAEELMKGGD 434


>ref|XP_004167498.1| PREDICTED: katanin p60 ATPase-containing subunit A1-like, partial
            [Cucumis sativus]
          Length = 444

 Score =  184 bits (466), Expect = 1e-43
 Identities = 84/109 (77%), Positives = 103/109 (94%)
 Frame = +3

Query: 756  HPATFDTLSMDTDLKKEVLEDLDRFVKRREFYKRVGKPWKRGYLLYGPPGTGKSSLIAAM 935
            HPATFDTL+MD +LK+ ++EDLDRFV+R++FYK+VGK WKRGYLLYGPPGTGKSSLIAAM
Sbjct: 204  HPATFDTLAMDPELKQSIIEDLDRFVRRKDFYKKVGKAWKRGYLLYGPPGTGKSSLIAAM 263

Query: 936  ANYLKFNIYDLELASIYNNSELHRLLVATANRSILVIEDIDCSVQMQDR 1082
            ANYLKF+IYDL+L ++Y+NS+L R+L+AT NRSILVIEDIDCSVQ+Q+R
Sbjct: 264  ANYLKFDIYDLDLTNMYSNSDLRRVLLATTNRSILVIEDIDCSVQIQNR 312



 Score =  129 bits (325), Expect = 3e-27
 Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
 Frame = +2

Query: 1382 QLTLSGILNFIDGLWSSCGDERIIVFTTNQKDRFDPALLRPGRMDMHIHMSYCTPCGFRL 1561
            + TLSG+LNFIDGLWSSCGDERII+FTTN K R DPALLR GRMDMHI+MSYC+  G R+
Sbjct: 324  KFTLSGMLNFIDGLWSSCGDERIIIFTTNNKHRLDPALLRAGRMDMHINMSYCSREGLRV 383

Query: 1562 LTSNYI--QIQNDPLFEEIEILLRNVNATPAELAEELMKSDDAK 1687
            L SNY+  +      + EIE L+  +   PAE+AEELMK ++ +
Sbjct: 384  LVSNYLGGEATKHSTYGEIEELIGEMEVAPAEIAEELMKGEETE 427


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