BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001478
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put...   221   7e-88
ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleop...   223   1e-87
ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [M...   224   6e-87
ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|2...   226   6e-87
ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|2...   221   8e-86

>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis] gi|223547409|gb|EEF48904.1| heterogeneous
           nuclear ribonucleoprotein, putative [Ricinus communis]
          Length = 260

 Score =  221 bits (564), Expect(2) = 7e-88
 Identities = 114/164 (69%), Positives = 129/164 (78%)
 Frame = +1

Query: 316 AFCVLGFPLQVDFALQRNRQNMGRRYIEVFTSKRQEYYKAIANEVAETQGGSPPPRRNVQ 495
           AFCVLG PLQVDFALQ+NRQNMGRRY+EVF SKRQ+YYKAIANEV++ +GGSP   R   
Sbjct: 100 AFCVLGCPLQVDFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSP---RRAP 156

Query: 496 RAXXXXXXXXXAEHTGVLRLRGLPFSAGXXXXXXXXXXXTLSEDSVHIVMNSDGRPSGEA 675
           RA         AEHTGVLRLRGLPFSAG            LSEDSVHI MNS+GRP+GEA
Sbjct: 157 RAKSYDEGKDSAEHTGVLRLRGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEA 216

Query: 676 FVEFPSADDSRAAMVKDRMTLGSRYIELFPSSREELDDAISKRR 807
           FVEF SA+DS+AAM KDRMTLGSRYIELFPSS EEL++A+++ R
Sbjct: 217 FVEFASAEDSKAAMAKDRMTLGSRYIELFPSSIEELEEAVTRGR 260



 Score =  130 bits (326), Expect(2) = 7e-88
 Identities = 62/88 (70%), Positives = 71/88 (80%)
 Frame = +2

Query: 2   RLMDPTPSFYGPPPTSSSYLYNASPPPPLPRYAYTAQPPPFPVVRLRGLPFDCSDADVIE 181
           RL+D  PS+YG  P   S++YN   PPP   Y Y AQPPPFPVVRLRGLPFDC++ DV E
Sbjct: 25  RLVDQGPSYYGTSP-GPSFMYN---PPP---YGYVAQPPPFPVVRLRGLPFDCTETDVAE 77

Query: 182 FFHGLDIVDILFVHKGGRFSGEAFCVLG 265
           FFHGLDIVD+LFVHKGG+F+GEAFCVLG
Sbjct: 78  FFHGLDIVDVLFVHKGGKFTGEAFCVLG 105


>ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
           vinifera]
          Length = 258

 Score =  223 bits (567), Expect(2) = 1e-87
 Identities = 112/164 (68%), Positives = 131/164 (79%)
 Frame = +1

Query: 316 AFCVLGFPLQVDFALQRNRQNMGRRYIEVFTSKRQEYYKAIANEVAETQGGSPPPRRNVQ 495
           AFCVLG+PLQV+FALQRNRQNMGRRY+EVF SKRQEYYKAIANEV++T+GGSP  RR   
Sbjct: 97  AFCVLGYPLQVEFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDTRGGSP--RRTAP 154

Query: 496 RAXXXXXXXXXAEHTGVLRLRGLPFSAGXXXXXXXXXXXTLSEDSVHIVMNSDGRPSGEA 675
           +A         AEHTGVLRLRGLPFSA             LSEDS+H+ +NS+GRP+GEA
Sbjct: 155 KAKSNDEGKESAEHTGVLRLRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEA 214

Query: 676 FVEFPSADDSRAAMVKDRMTLGSRYIELFPSSREELDDAISKRR 807
           FVEF +A+DS+AAM KDRMTLGSRYIELFPSS EELD+A+++ R
Sbjct: 215 FVEFTNAEDSKAAMAKDRMTLGSRYIELFPSSLEELDEAVARGR 258



 Score =  127 bits (320), Expect(2) = 1e-87
 Identities = 61/89 (68%), Positives = 70/89 (78%)
 Frame = +2

Query: 2   RLMDPTPSFYGPPPTSSSYLYNASPPPPLPRYAYTAQPPPFPVVRLRGLPFDCSDADVIE 181
           R+ D   SFYG  P  S+++YNASP      Y+Y  QPPPFPVVRLRGLPFDCS+ADV E
Sbjct: 22  RITDQGSSFYGGSP-GSNFMYNASP------YSYIGQPPPFPVVRLRGLPFDCSEADVAE 74

Query: 182 FFHGLDIVDILFVHKGGRFSGEAFCVLGF 268
           FFH LDIVD+LFVHK GRF+GEAFCVLG+
Sbjct: 75  FFHSLDIVDVLFVHKNGRFTGEAFCVLGY 103


>ref|XP_003600475.1| Heterogeneous nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355489523|gb|AES70726.1| Heterogeneous nuclear
           ribonucleoprotein F [Medicago truncatula]
          Length = 259

 Score =  224 bits (571), Expect(2) = 6e-87
 Identities = 114/163 (69%), Positives = 130/163 (79%)
 Frame = +1

Query: 319 FCVLGFPLQVDFALQRNRQNMGRRYIEVFTSKRQEYYKAIANEVAETQGGSPPPRRNVQR 498
           FCVLG+PLQVDFALQRNRQN+GRRY+EVF SKRQEYYKAIANEV++ +GGSP  RR+  R
Sbjct: 99  FCVLGYPLQVDFALQRNRQNIGRRYVEVFRSKRQEYYKAIANEVSDARGGSP--RRSAPR 156

Query: 499 AXXXXXXXXXAEHTGVLRLRGLPFSAGXXXXXXXXXXXTLSEDSVHIVMNSDGRPSGEAF 678
           A         AEHTGVLRLRGLPFSA             LSEDS+HIVMNS+GRPSGEA+
Sbjct: 157 AKSYDEGKDSAEHTGVLRLRGLPFSANKDDIMDFFKEYVLSEDSIHIVMNSEGRPSGEAY 216

Query: 679 VEFPSADDSRAAMVKDRMTLGSRYIELFPSSREELDDAISKRR 807
           VEF +ADDS+AAM KDRMTLGSRYIELFPS+  E++DAIS+ R
Sbjct: 217 VEFENADDSKAAMAKDRMTLGSRYIELFPSTHGEMEDAISRGR 259



 Score =  124 bits (311), Expect(2) = 6e-87
 Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   RLMDPTPSFYGPPPTSSSYLYNASPPPPLPRYAYTAQPPP--FPVVRLRGLPFDCSDADV 175
           R +D   SFYG P   SSY+YN SP      Y Y +QPPP  FPVVRLRGLPFDC++ DV
Sbjct: 22  RTVDAGSSFYGSP--GSSYMYNPSP------YGYVSQPPPPPFPVVRLRGLPFDCTETDV 73

Query: 176 IEFFHGLDIVDILFVHKGGRFSGEAFCVLGF 268
            EFFHGLDIVD+LFVHKGG+FSGE FCVLG+
Sbjct: 74  AEFFHGLDIVDVLFVHKGGKFSGEGFCVLGY 104


>ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|222847166|gb|EEE84713.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  226 bits (575), Expect(2) = 6e-87
 Identities = 114/164 (69%), Positives = 131/164 (79%)
 Frame = +1

Query: 316 AFCVLGFPLQVDFALQRNRQNMGRRYIEVFTSKRQEYYKAIANEVAETQGGSPPPRRNVQ 495
           AFCVLG+PLQVDFALQ+NRQNMGRRY+EVF SKRQ+YYKAIANEV+E++G    PRRN+ 
Sbjct: 93  AFCVLGYPLQVDFALQKNRQNMGRRYVEVFRSKRQDYYKAIANEVSESRGS---PRRNIS 149

Query: 496 RAXXXXXXXXXAEHTGVLRLRGLPFSAGXXXXXXXXXXXTLSEDSVHIVMNSDGRPSGEA 675
           RA         AEHTGVLRLRGLPFSAG            LSED +HI MNS+GRP+GEA
Sbjct: 150 RAKSYDEGKDLAEHTGVLRLRGLPFSAGKDDIMEFFKDFVLSEDLIHITMNSEGRPTGEA 209

Query: 676 FVEFPSADDSRAAMVKDRMTLGSRYIELFPSSREELDDAISKRR 807
           FVEF +A+DS+AAM KDRMTLGSRYIELFPSS EELD+A+S+ R
Sbjct: 210 FVEFANAEDSKAAMAKDRMTLGSRYIELFPSSIEELDEAVSRGR 253



 Score =  122 bits (307), Expect(2) = 6e-87
 Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   RLMDPTPSFYGPPPTSSSYLYNASPPPPLPRYAYTAQPPP-FPVVRLRGLPFDCSDADVI 178
           R++D  PSFYG  P  SS++YN  P      Y Y +QPPP FPVVRLRGLPFDC++ DV 
Sbjct: 17  RMVDQGPSFYGNSP-GSSFMYNTPP------YGYVSQPPPPFPVVRLRGLPFDCTETDVA 69

Query: 179 EFFHGLDIVDILFVHKGGRFSGEAFCVLGF 268
           EFF GLDIVD+LFVHKGG+F+GEAFCVLG+
Sbjct: 70  EFFRGLDIVDVLFVHKGGKFTGEAFCVLGY 99


>ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|222849747|gb|EEE87294.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  221 bits (564), Expect(2) = 8e-86
 Identities = 112/164 (68%), Positives = 129/164 (78%)
 Frame = +1

Query: 316 AFCVLGFPLQVDFALQRNRQNMGRRYIEVFTSKRQEYYKAIANEVAETQGGSPPPRRNVQ 495
           AFCVLG+PLQVDFALQ+NRQNMGRRY+EVF SKRQ+YYK IANEV+E++G    PRRN+ 
Sbjct: 93  AFCVLGYPLQVDFALQKNRQNMGRRYVEVFRSKRQDYYKTIANEVSESRGS---PRRNIP 149

Query: 496 RAXXXXXXXXXAEHTGVLRLRGLPFSAGXXXXXXXXXXXTLSEDSVHIVMNSDGRPSGEA 675
           RA         AEHTGVLRLRGLPFSA             LSEDS+HI MNS+GRP+GEA
Sbjct: 150 RAKSYDEGKDSAEHTGVLRLRGLPFSASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEA 209

Query: 676 FVEFPSADDSRAAMVKDRMTLGSRYIELFPSSREELDDAISKRR 807
           FVEF +A+DS+AAM KDRMTLGSRYIELFPSS EE D+A+S+ R
Sbjct: 210 FVEFANAEDSKAAMAKDRMTLGSRYIELFPSSVEESDEAVSRGR 253



 Score =  123 bits (308), Expect(2) = 8e-86
 Identities = 59/89 (66%), Positives = 68/89 (76%)
 Frame = +2

Query: 2   RLMDPTPSFYGPPPTSSSYLYNASPPPPLPRYAYTAQPPPFPVVRLRGLPFDCSDADVIE 181
           R+ D  PSFY   P  SS++YNA P        Y +QPP FPVVRLRGLPFDC++ DV E
Sbjct: 18  RIADKGPSFYANSP-GSSFMYNAPPN------GYASQPPHFPVVRLRGLPFDCTETDVAE 70

Query: 182 FFHGLDIVDILFVHKGGRFSGEAFCVLGF 268
           FFHGLDIVD+LFVHKGG+FSGEAFCVLG+
Sbjct: 71  FFHGLDIVDVLFVHKGGKFSGEAFCVLGY 99