BLASTX nr result

ID: Cimicifuga21_contig00001453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001453
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275228.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   154   3e-35
ref|XP_002299367.1| predicted protein [Populus trichocarpa] gi|1...   145   1e-32
ref|XP_002303733.1| predicted protein [Populus trichocarpa] gi|1...   144   2e-32
ref|XP_004141152.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   143   4e-32
gb|AFK46939.1| unknown [Lotus japonicus]                              143   5e-32

>ref|XP_002275228.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 2 isoform 1 [Vitis vinifera]
           gi|359473851|ref|XP_003631368.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
           isoform 2 [Vitis vinifera] gi|296085568|emb|CBI29300.3|
           unnamed protein product [Vitis vinifera]
          Length = 98

 Score =  154 bits (388), Expect = 3e-35
 Identities = 73/95 (76%), Positives = 81/95 (85%)
 Frame = -1

Query: 666 MAWRGQLSRNLKELRVLYCQKSPASAQTREFVERNYKDLKTLNPKFPILIRECSQVDPQL 487
           MAWRGQLSRNLKELR+L+CQ SPAS+  R FVERNYKDLKTLNPKFPILIREC+   PQL
Sbjct: 1   MAWRGQLSRNLKELRILFCQTSPASSSARAFVERNYKDLKTLNPKFPILIRECNGTRPQL 60

Query: 486 WARYDRGVERGIHLGGLTEAQITSVVKELVEAGAA 382
           WARYD GVERGIHL GLTE QI+  V++L + GAA
Sbjct: 61  WARYDMGVERGIHLEGLTEEQISKAVEDLAKLGAA 95


>ref|XP_002299367.1| predicted protein [Populus trichocarpa] gi|118481598|gb|ABK92741.1|
           unknown [Populus trichocarpa]
           gi|118488952|gb|ABK96284.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222846625|gb|EEE84172.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  145 bits (366), Expect = 1e-32
 Identities = 66/95 (69%), Positives = 82/95 (86%)
 Frame = -1

Query: 666 MAWRGQLSRNLKELRVLYCQKSPASAQTREFVERNYKDLKTLNPKFPILIRECSQVDPQL 487
           MAWRGQLS+NLKELR+L CQ SP+S+ TR F+E+NYKDLKTLNPK PILIREC+ ++PQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSSSTRTFIEKNYKDLKTLNPKLPILIRECNGIEPQL 60

Query: 486 WARYDRGVERGIHLGGLTEAQITSVVKELVEAGAA 382
           WARYD GVERG+ L GL+EAQI+  ++EL + GA+
Sbjct: 61  WARYDFGVERGVRLEGLSEAQISKALEELGKVGAS 95


>ref|XP_002303733.1| predicted protein [Populus trichocarpa] gi|118485632|gb|ABK94666.1|
           unknown [Populus trichocarpa]
           gi|222841165|gb|EEE78712.1| predicted protein [Populus
           trichocarpa]
          Length = 98

 Score =  144 bits (363), Expect = 2e-32
 Identities = 66/95 (69%), Positives = 82/95 (86%)
 Frame = -1

Query: 666 MAWRGQLSRNLKELRVLYCQKSPASAQTREFVERNYKDLKTLNPKFPILIRECSQVDPQL 487
           MAWRGQLS+NLKELR+L CQ SP+S+ TR F+ER+YKDLKTLNPK PILIREC+ ++PQL
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSSTTRTFIERSYKDLKTLNPKLPILIRECNGIEPQL 60

Query: 486 WARYDRGVERGIHLGGLTEAQITSVVKELVEAGAA 382
           WARYD GVERG+ L GL+EAQI+  ++EL + GA+
Sbjct: 61  WARYDFGVERGVRLEGLSEAQISKALEELGKVGAS 95


>ref|XP_004141152.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 2-like [Cucumis sativus]
           gi|449509541|ref|XP_004163618.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           2-like [Cucumis sativus]
          Length = 95

 Score =  143 bits (361), Expect = 4e-32
 Identities = 66/95 (69%), Positives = 81/95 (85%)
 Frame = -1

Query: 666 MAWRGQLSRNLKELRVLYCQKSPASAQTREFVERNYKDLKTLNPKFPILIRECSQVDPQL 487
           MAWRG+LS+NLKELR+L CQ SP+SA  R FVE+NYKDLKTLNPKFPILIRECS ++PQL
Sbjct: 1   MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 486 WARYDRGVERGIHLGGLTEAQITSVVKELVEAGAA 382
           WARYD G+ER   L GL+EAQI+  +++LV+ GA+
Sbjct: 61  WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95


>gb|AFK46939.1| unknown [Lotus japonicus]
          Length = 98

 Score =  143 bits (360), Expect = 5e-32
 Identities = 65/93 (69%), Positives = 80/93 (86%)
 Frame = -1

Query: 666 MAWRGQLSRNLKELRVLYCQKSPASAQTREFVERNYKDLKTLNPKFPILIRECSQVDPQL 487
           MAWRG +S+N+KELR+L CQ SPAS+  R FVE+NYK+LKTLNPK PIL+RECS V+PQL
Sbjct: 1   MAWRGHISKNIKELRILMCQSSPASSSARAFVEKNYKELKTLNPKLPILVRECSGVEPQL 60

Query: 486 WARYDRGVERGIHLGGLTEAQITSVVKELVEAG 388
           WARYD GVE+GI L GLTE QI+ V+++LV+AG
Sbjct: 61  WARYDLGVEKGIKLEGLTETQISKVLEDLVKAG 93


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