BLASTX nr result

ID: Cimicifuga21_contig00001424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001424
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278772.1| PREDICTED: nuclear transcription factor Y su...   266   5e-69
ref|XP_002278716.1| PREDICTED: nuclear transcription factor Y su...   263   6e-68
ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y su...   260   3e-67
ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y su...   259   5e-67
ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y su...   259   5e-67

>ref|XP_002278772.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           2 [Vitis vinifera]
          Length = 161

 Score =  266 bits (680), Expect = 5e-69
 Identities = 132/155 (85%), Positives = 145/155 (93%), Gaps = 3/155 (1%)
 Frame = -2

Query: 773 MADGPSSPAGGSHESG-EQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQ 597
           MADGP+SP GGSHESG +QSPR NVREQDRYLPIANISRIMKKALPANGKIAKDAK+TVQ
Sbjct: 1   MADGPASPPGGSHESGGDQSPRHNVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60

Query: 596 ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREMEGD 417
           ECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLKVYL RYRE+EGD
Sbjct: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLQRYRELEGD 120

Query: 416 TKGSAKGVDGSTRREAVGGQPGQNSQA--QHLMMS 318
           T+GSA+G DGS RR+A+G QPG N+QA  QHL++S
Sbjct: 121 TRGSARGGDGSARRDAIGSQPGPNAQAQGQHLIVS 155


>ref|XP_002278716.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           1 [Vitis vinifera] gi|359486707|ref|XP_003633465.1|
           PREDICTED: nuclear transcription factor Y subunit
           B-8-like [Vitis vinifera]
          Length = 178

 Score =  263 bits (671), Expect = 6e-68
 Identities = 128/149 (85%), Positives = 139/149 (93%), Gaps = 1/149 (0%)
 Frame = -2

Query: 773 MADGPSSPAGGSHESG-EQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQ 597
           MADGP+SP GGSHESG +QSPR NVREQDRYLPIANISRIMKKALPANGKIAKDAK+TVQ
Sbjct: 1   MADGPASPPGGSHESGGDQSPRHNVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60

Query: 596 ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREMEGD 417
           ECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLKVYL RYRE+EGD
Sbjct: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLQRYRELEGD 120

Query: 416 TKGSAKGVDGSTRREAVGGQPGQNSQAQH 330
           T+GSA+G DGS RR+A+G QPG N+Q  H
Sbjct: 121 TRGSARGGDGSARRDAIGSQPGPNAQFAH 149


>ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Cucumis
           sativus]
          Length = 173

 Score =  260 bits (665), Expect = 3e-67
 Identities = 134/173 (77%), Positives = 140/173 (80%), Gaps = 16/173 (9%)
 Frame = -2

Query: 773 MADGPSSPAGGSHESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQE 594
           MAD P+SP GGSHESGEQSPRSNVREQDR+LPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 593 CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREMEGDT 414
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK YL +YRE EGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDT 120

Query: 413 KGSAKGVDGSTRREAVG----------------GQPGQNSQAQHLMMSMHGTD 303
           KGSAKG DGS ++EA                        SQAQHLM+ M GTD
Sbjct: 121 KGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 173


>ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Glycine
           max]
          Length = 171

 Score =  259 bits (663), Expect = 5e-67
 Identities = 131/171 (76%), Positives = 140/171 (81%), Gaps = 14/171 (8%)
 Frame = -2

Query: 773 MADGPSSPAGGSHESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQE 594
           MADGP+SP GGSHESG+ SPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADGPASPGGGSHESGDHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 593 CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREMEGDT 414
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDY+DPLK+YL RYREMEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRYREMEGDT 120

Query: 413 KGSAKGVDGSTRREAVGGQPGQ--------------NSQAQHLMMSMHGTD 303
           KGSAKG D S +R+       Q              NSQ QH+M+ M G +
Sbjct: 121 KGSAKGGDSSAKRDVQPSPNAQLAHQGSFSQNVTYPNSQGQHMMVPMQGPE 171


>ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           2 [Glycine max]
          Length = 171

 Score =  259 bits (663), Expect = 5e-67
 Identities = 133/174 (76%), Positives = 142/174 (81%), Gaps = 17/174 (9%)
 Frame = -2

Query: 773 MADGPSSPAGGSHESGEQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQE 594
           MADGP+SP GGSHESGE SPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADGPASPGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 593 CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLNRYREMEGDT 414
           CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK+YL RYREMEGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDT 120

Query: 413 KGSAKGVDGSTRREAVGGQPGQN-----------------SQAQHLMMSMHGTD 303
           KGSAKG D S++++    QP  N                 SQ QH+M+ M G +
Sbjct: 121 KGSAKGGDSSSKKDV---QPSPNAQLAHQGSFSQGVSYTISQGQHMMVPMQGPE 171


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