BLASTX nr result

ID: Cimicifuga21_contig00001419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001419
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2...   168   6e-40
gb|ABK94888.1| unknown [Populus trichocarpa]                          167   8e-40
ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002519976.1| GTP binding protein, putative [Ricinus commu...   163   2e-38
ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...   159   4e-37

>ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  168 bits (425), Expect = 6e-40
 Identities = 78/116 (67%), Positives = 100/116 (86%)
 Frame = -3

Query: 560 KLTIADNWVVYEGETKFNPLYTVKKHVNLLNSRLLAHITAGCNNGSNKNVVYQIEGSYVQ 381
           +L++ DNW+VYEGET  NP + VKKHVN+LN++ LAH++    +GSNKNVVY+IEGSY Q
Sbjct: 94  RLSLGDNWLVYEGETTTNPRFLVKKHVNILNTKCLAHVSPA--SGSNKNVVYEIEGSYAQ 151

Query: 380 RCCTVYDEKRRAVAEIKRKEPVGGVSFGIDVFRLVVQPELDSSVAMALVILLEQMF 213
           RCC VYDEK+R VAEIK+KE VGGV+FG+DVFRL+V PE+ +S+AMA+VILL+QMF
Sbjct: 152 RCCAVYDEKKRRVAEIKQKESVGGVAFGVDVFRLIVGPEMGTSMAMAMVILLDQMF 207


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  167 bits (424), Expect = 8e-40
 Identities = 77/118 (65%), Positives = 102/118 (86%)
 Frame = -3

Query: 560 KLTIADNWVVYEGETKFNPLYTVKKHVNLLNSRLLAHITAGCNNGSNKNVVYQIEGSYVQ 381
           +L++ D+W+VY+GET  NP ++VKKHV++LN + LAH++     GSNKNV+Y+IEGSY Q
Sbjct: 97  RLSLGDSWLVYDGETAINPEFSVKKHVSILNKKCLAHVSQAA--GSNKNVMYEIEGSYTQ 154

Query: 380 RCCTVYDEKRRAVAEIKRKEPVGGVSFGIDVFRLVVQPELDSSVAMALVILLEQMFGS 207
           RCC VYDEK+R VAEIK+KE VGGV+FG+DVFRL+V PE+DSS+AMA+VI+L+QMFGS
Sbjct: 155 RCCAVYDEKKRRVAEIKQKERVGGVAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212


>ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/117 (64%), Positives = 101/117 (86%)
 Frame = -3

Query: 560 KLTIADNWVVYEGETKFNPLYTVKKHVNLLNSRLLAHITAGCNNGSNKNVVYQIEGSYVQ 381
           +L++ D+W+VY+GET  NP ++VKKHV++LN + LAH++     GSNKNV+Y+IEGSY Q
Sbjct: 97  RLSLGDSWLVYDGETAINPEFSVKKHVSILNKKCLAHVSQAA--GSNKNVMYEIEGSYTQ 154

Query: 380 RCCTVYDEKRRAVAEIKRKEPVGGVSFGIDVFRLVVQPELDSSVAMALVILLEQMFG 210
           RCC VYDEK+R VAEIK+KE VGGV+FG+DVFRL+V PE+DSS+AMA+VI+L+QMFG
Sbjct: 155 RCCAVYDEKKRRVAEIKQKERVGGVAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFG 211


>ref|XP_002519976.1| GTP binding protein, putative [Ricinus communis]
           gi|223540740|gb|EEF42300.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 215

 Score =  163 bits (413), Expect = 2e-38
 Identities = 74/121 (61%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
 Frame = -3

Query: 560 KLTIADNWVVYEGETKFNPLYTVKKHVNLLNSRLLAHITAGCNNGS---NKNVVYQIEGS 390
           +L++ DNW+VY+GET  NPL++V+KHV +LN++ LAH++   ++GS   +KN+VY+IEGS
Sbjct: 89  RLSLGDNWLVYDGETAVNPLFSVRKHVKILNTKSLAHVSGNSSSGSTSNSKNIVYEIEGS 148

Query: 389 YVQRCCTVYDEKRRAVAEIKRKEPVGGVSFGIDVFRLVVQPELDSSVAMALVILLEQMFG 210
           Y QR C VYD+K R VAEIK+KE VGGV+FG+DVFRL++ P++D+SVAMA+VILL+QMFG
Sbjct: 149 YSQRSCAVYDDKHRRVAEIKQKEAVGGVAFGVDVFRLIIGPKMDTSVAMAIVILLDQMFG 208

Query: 209 S 207
           S
Sbjct: 209 S 209


>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|147770903|emb|CAN65231.1| hypothetical protein
           VITISV_007600 [Vitis vinifera]
           gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
           vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
           [Vitis vinifera]
          Length = 216

 Score =  159 bits (401), Expect = 4e-37
 Identities = 78/125 (62%), Positives = 96/125 (76%), Gaps = 7/125 (5%)
 Frame = -3

Query: 560 KLTIADNWVVYEGETKFNPLYTVKKHVNLLNSRLLAHITAGCNNG-------SNKNVVYQ 402
           +L++ DNW+VY+GET  NP + V+KH NLLNS+ LA ++ G   G       S +N +Y+
Sbjct: 86  RLSLGDNWMVYDGETAENPRFQVRKHANLLNSKSLARVSGGGGAGGSSSSSSSPRNAMYE 145

Query: 401 IEGSYVQRCCTVYDEKRRAVAEIKRKEPVGGVSFGIDVFRLVVQPELDSSVAMALVILLE 222
           IEGSY QRCC VYDE RR VAEIKRKE V GV+ G+DVFRLVVQPE+D+ VAMALVILL+
Sbjct: 146 IEGSYSQRCCAVYDETRRCVAEIKRKEAVAGVALGVDVFRLVVQPEMDTPVAMALVILLD 205

Query: 221 QMFGS 207
           QMFGS
Sbjct: 206 QMFGS 210


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