BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001408
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   202   1e-49
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-45
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   171   4e-40
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   155   3e-35
ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213...   155   3e-35

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
            vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
            product [Vitis vinifera]
          Length = 333

 Score =  202 bits (515), Expect = 1e-49
 Identities = 134/318 (42%), Positives = 172/318 (54%), Gaps = 33/318 (10%)
 Frame = +3

Query: 195  DQCVHKSRLHQYTQKSTLLAPIYHTVSEGSPHEPKFVSTVSIDGVDYKS-QPCRHRKEAE 371
            +  +HK+RL +YTQ+S +  PIY TV+EG  H PKF STV +DG  Y S     HRK AE
Sbjct: 19   EHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRKAAE 78

Query: 372  QDAARIALDAILKKINERGCTILYEDISCCKSILHEFAVKMSLELPTYTTTRSEGSLPMF 551
            QD AR+AL+ I KKI + GC ++ ED   CKSIL+EFAVKM+LE PTYTT + EG LP+F
Sbjct: 79   QDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVF 138

Query: 552  IPTLTFHGKTYSGNPGRSKKEAEQFGARSVILSILG-SESGPHLSEIINAKRKLYDDALR 728
            + +L F+G TY+G+ GR+KKEAEQ  AR+VILSILG S SG  LSEII +K KLY  AL 
Sbjct: 139  VSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLY-AALH 197

Query: 729  KASEQN-----VMP------IVPCPENAVEVK--------------------KAPETLPD 815
            +  + +     ++P      I PC    VEV                       P T P 
Sbjct: 198  RVKDPSYIHTGILPIGLTSGIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPP 257

Query: 816  VQALKKPKLEHDETSVGSVLDQPPCAVQAGLTGVQGTTSSSXXXXXXXXXXXXXXXXERL 995
            V  L+KPK       +   +   P   +  L  V  TT                    +L
Sbjct: 258  VHELEKPKPNVSSEVIAPPISFVPSVFEQPLV-VSPTTGRKRNRKNKKKANKKLRTDAQL 316

Query: 996  ADGRIQPMIRPSPCSVAQ 1049
                + P+ + SPCSVAQ
Sbjct: 317  PVA-VLPLNQASPCSVAQ 333


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  188 bits (478), Expect = 3e-45
 Identities = 111/243 (45%), Positives = 152/243 (62%), Gaps = 6/243 (2%)
 Frame = +3

Query: 195 DQCVHKSRLHQYTQKSTLLAPIYHTVSEGSPHEPKFVSTVSIDGVDYKSQPC-RHRKEAE 371
           D  ++K+RL +YTQKS+L  P+Y T++EG  H P+F STV +DG  Y+SQ    HRK AE
Sbjct: 136 DNLMYKNRLQEYTQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAAE 195

Query: 372 QDAARIALDAILKKINERGCTILYEDISCCKSILHEFAVKMSLELPTYTTTRSEGSLPMF 551
           QD A +AL++ILK++ + GC +L  D   CKSIL+EFAVK++ E PTY T +S G LP+F
Sbjct: 196 QDVANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVF 255

Query: 552 IPTLTFHGKTYSGNPGRSKKEAEQFGARSVILSILG-SESGPHLSEIINAKRKLYDDALR 728
           I TL F G +Y+G+ GR+KKEAEQ  AR+VILS++G S S   L EII +K KLY    R
Sbjct: 256 ISTLVFDGVSYTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDR 315

Query: 729 ----KASEQNVMPIVPCPENAVEVKKAPETLPDVQALKKPKLEHDETSVGSVLDQPPCAV 896
                 S+ N++P+      AV+V    ET  D +      +  D   V + +   P AV
Sbjct: 316 VKDPSHSQPNIVPV------AVKVGHCSETTVDQEQEVSTAVVRDAAPVSANI--VPVAV 367

Query: 897 QAG 905
           + G
Sbjct: 368 KVG 370


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  171 bits (433), Expect = 4e-40
 Identities = 93/197 (47%), Positives = 132/197 (67%), Gaps = 8/197 (4%)
 Frame = +3

Query: 195 DQCVHKSRLHQYTQKSTLLAPIYHTVSEGSPHEPKFVSTVSIDGVDYKSQPC-RHRKEAE 371
           +  ++K+RL +YTQ+ +L  PIY TV+EG PH+PKF STV +DG +Y S     HRKEAE
Sbjct: 10  EHLMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEAE 69

Query: 372 QDAARIALDAILKKINE--RGCTILYEDISCCKSILHEFAVKMSLELPTYTTTRSEGSLP 545
           QD A++AL +I +KI +  +     +ED   CKSIL+E+AVKM LE+PTY T +  G  P
Sbjct: 70  QDVAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGGLFP 129

Query: 546 MFIPTLTFHGKTYSGNPGRSKKEAEQFGARSVILSILGS-ESGPHLSEIINAKRKLYDDA 722
           +F+ +  F+G TY+G+ GR+KKEAEQ  AR+ +LS+L + ESG  +S+   +KRKLY   
Sbjct: 130 IFVSSSVFNGVTYNGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSKRKLY-VG 188

Query: 723 LRKASEQNV----MPIV 761
             K+  Q+     MP+V
Sbjct: 189 FHKSDSQDAQNSNMPVV 205


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  155 bits (391), Expect = 3e-35
 Identities = 89/201 (44%), Positives = 121/201 (60%), Gaps = 7/201 (3%)
 Frame = +3

Query: 204 VHKSRLHQYTQKSTLLAPIYHTVSEGSPHEPKFVSTVSIDGVDYKS-QPCRHRKEAEQDA 380
           V+K+ LH+YTQK+ +  P+Y T+ EGSP  PK+ STV +D V Y S    R+R+ AEQDA
Sbjct: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136

Query: 381 ARIALDAILKKINERGCTILYEDISCCKSILHEFAVKMSLELPTYTTTRSEGSLPMFIPT 560
           AR+A + I KK  +    +L ED+  CKSIL E+  KM LE P YTT  ++GS+  F  T
Sbjct: 137 ARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQST 196

Query: 561 LTFHGKTYSGNPGRSKKEAEQFGARSVILSILGSESGPH----LSEIINAKRKLYDDALR 728
           L F G  Y+ + GR+KKEAEQ  AR+ ILS+    + P     L +II +K + +   L+
Sbjct: 197 LVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVR-FHAMLQ 255

Query: 729 KASEQNVMPIVP--CPENAVE 785
           K  + N     P   PEN VE
Sbjct: 256 KVKDSNFSQFQPKSMPENTVE 276


>ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  155 bits (391), Expect = 3e-35
 Identities = 89/201 (44%), Positives = 121/201 (60%), Gaps = 7/201 (3%)
 Frame = +3

Query: 204 VHKSRLHQYTQKSTLLAPIYHTVSEGSPHEPKFVSTVSIDGVDYKS-QPCRHRKEAEQDA 380
           V+K+ LH+YTQK+ +  P+Y T+ EGSP  PK+ STV +D V Y S    R+R+ AEQDA
Sbjct: 77  VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136

Query: 381 ARIALDAILKKINERGCTILYEDISCCKSILHEFAVKMSLELPTYTTTRSEGSLPMFIPT 560
           AR+A + I KK  +    +L ED+  CKSIL E+  KM LE P YTT  ++GS+  F  T
Sbjct: 137 ARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQST 196

Query: 561 LTFHGKTYSGNPGRSKKEAEQFGARSVILSILGSESGPH----LSEIINAKRKLYDDALR 728
           L F G  Y+ + GR+KKEAEQ  AR+ ILS+    + P     L +II +K + +   L+
Sbjct: 197 LVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVR-FHAMLQ 255

Query: 729 KASEQNVMPIVP--CPENAVE 785
           K  + N     P   PEN VE
Sbjct: 256 KVKDSNFSQFQPKSMPENTVE 276