BLASTX nr result

ID: Cimicifuga21_contig00001401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001401
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267...   108   1e-21
emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]   105   1e-20
gb|ABC01887.1| unknown [Solanum tuberosum]                             96   9e-18
ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|1...    90   5e-16
ref|XP_002528544.1| conserved hypothetical protein [Ricinus comm...    84   5e-14

>ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267682 [Vitis vinifera]
          Length = 147

 Score =  108 bits (270), Expect = 1e-21
 Identities = 71/151 (47%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
 Frame = -1

Query: 732 MQRQSLGGSPGSKLHLAGGAXXXXXXXXXXXXXKDGGEVLEDEEDNKIEKLLYHRSTCRN 553
           MQRQSLG SP SKLH+ GG                     +DE D+K  K L   S+   
Sbjct: 1   MQRQSLG-SPSSKLHIHGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPL-RSSSSPP 58

Query: 552 EKSIHLIPILTIFCLLVLYLVSYDPPQKDLAHIKGFIRLSSKI-DSTEIGDSHKFVEIKK 376
           +K IHLIP+L +FC L+LYL S+DP   +LA   GF + SSK+ DS EI D  +FV   K
Sbjct: 59  DKLIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFV--VK 116

Query: 375 SDVLAIRSHRSLLKHGSKALKLRSHRKIGDF 283
           SDV +IRS R+L + G+ A K R HRK+GDF
Sbjct: 117 SDVFSIRSLRNLQEIGTYAPKSRLHRKMGDF 147


>emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]
          Length = 150

 Score =  105 bits (262), Expect = 1e-20
 Identities = 71/154 (46%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
 Frame = -1

Query: 732 MQRQSLGGSPGSKLHLAGGAXXXXXXXXXXXXXKD---GGEVLEDEEDNKIEKLLYHRST 562
           MQRQSLG SP SKLH+ GG               +        +DE D+K  K L   S+
Sbjct: 1   MQRQSLG-SPSSKLHIHGGGGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPL-RSSS 58

Query: 561 CRNEKSIHLIPILTIFCLLVLYLVSYDPPQKDLAHIKGFIRLSSKI-DSTEIGDSHKFVE 385
              +K IHLIP+L +FC L+LYL S+DP   +LA   GF + SSK+ DS EI D  +FV 
Sbjct: 59  SPPDKLIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFV- 117

Query: 384 IKKSDVLAIRSHRSLLKHGSKALKLRSHRKIGDF 283
             KSDV +IRS R+L + G+ A K R HRK+GDF
Sbjct: 118 -VKSDVFSIRSLRNLQEIGTYAPKSRLHRKMGDF 150


>gb|ABC01887.1| unknown [Solanum tuberosum]
          Length = 167

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 62/168 (36%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
 Frame = -1

Query: 732 MQRQSLGGSPGSKLHLAGGAXXXXXXXXXXXXXK--DGGEVLE--------------DEE 601
           M RQSLG S GSKLHLA G                 +  +++               DE 
Sbjct: 1   MHRQSLGSS-GSKLHLAHGVVIVGGSRDESAVVTAAESQKIMTKDQASPSSSLSNNYDEG 59

Query: 600 DNKIEKLL--YHRSTCRNEKSIHLIPILTIFCLLVLYLVSYDPPQKDLAHIKGFIRLSSK 427
           + ++ K +   ++S  R EK IHLIP+LT  C  +LYL S+ P  KDLA  +GF   + +
Sbjct: 60  EEQVRKSIKALNKSLSRAEKYIHLIPVLTFLCFFILYLFSHSPSDKDLAQFQGFEGFTKR 119

Query: 426 IDSTEIGDSHKFVEIKKSDVLAIRSHRSLLKHGSKALKLRSHRKIGDF 283
           I+S  I + H+ +EI+   VLAIRS R+L +   +  K R HRK+ DF
Sbjct: 120 IESANIDELHRVLEIENPPVLAIRSTRNLQEINRQDAKHRRHRKLADF 167


>ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|118484537|gb|ABK94143.1|
           unknown [Populus trichocarpa]
           gi|222841784|gb|EEE79331.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 64/171 (37%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
 Frame = -1

Query: 732 MQRQSLGGSPGSKLHLAGGAXXXXXXXXXXXXXKDGGEVLEDEEDNKIEKLLYHRSTCRN 553
           MQRQSLG SP +KLH  GGA                   L  + D+   K +  R    +
Sbjct: 1   MQRQSLG-SPVTKLHTNGGADTLSSSDNKLLFKDLPSSSLTPDADDLDHKSIKPRRFSSS 59

Query: 552 ----------------EKSIHLIPILTIFCLLVLYLVSYDPPQKDLAHIKGFIRLSSKID 421
                           EK IHLIP LT+FC LVL+LVS++P Q DLA   GF R+S+ I+
Sbjct: 60  STSSLSSILSSPAPAPEKLIHLIPFLTLFCFLVLFLVSHNPSQADLAQFNGFKRVSNHIE 119

Query: 420 ST--EIGDSHKFVEIKKSDVLAIRSHRSLLKHGS---KALKLRSHRKIGDF 283
                +GD      +++ DVLA+RS R+L +  +     LK+RSHRK   F
Sbjct: 120 EAIESVGDVSGLSAVRRGDVLAVRSFRNLQEIAADKRAPLKVRSHRKFAHF 170


>ref|XP_002528544.1| conserved hypothetical protein [Ricinus communis]
           gi|223532046|gb|EEF33856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 64/170 (37%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
 Frame = -1

Query: 732 MQRQSLGGSPGSKLHLAGGAXXXXXXXXXXXXXKDGGEVLEDEED----NKIEKLLYHR- 568
           MQRQSLG SP SKLH  G A              +  +  +DE D    N  E+    + 
Sbjct: 1   MQRQSLG-SPVSKLHSHGVALVPKDDSTLLSLPDNHPKRSKDETDSTDGNNNERRKSTKP 59

Query: 567 --------------STCRNEKSIHLIPILTIFCLLVLYLVSYDPPQKDLAHIKGFIRLSS 430
                         S+ + EK +H IP+LT+ C LVLYLVS+ P Q DLA   GF + S 
Sbjct: 60  PPSRRFSSSSISALSSSKPEKLVHFIPLLTLLCFLVLYLVSHTPSQSDLAQFNGFKQSSK 119

Query: 429 KIDSTEIGDSHKF-VEIKKSDVLAIRSHRSLLKHGSKALKLRS---HRKI 292
            ID  EIGD  +F  +I++ D LAIR+  +L +   K    +S   HRKI
Sbjct: 120 HIDENEIGDVDRFGSDIRRGDALAIRNLMNLQEIADKRASSKSRIYHRKI 169


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