BLASTX nr result

ID: Cimicifuga21_contig00001397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001397
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]     81   2e-13
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    80   3e-13
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    80   3e-13

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/105 (43%), Positives = 67/105 (63%)
 Frame = -1

Query: 503 TGNDRISGLPDALLHQILSFLDMTQVVHTSLLSKRWKYLWKSTPNLNFPTVYYKKSSTWT 324
           +G   I+ LPDALL  ILSFL+    V TS+LS++W++LWKS  NL F   Y+K      
Sbjct: 35  SGGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYFKAKRKIF 94

Query: 323 MNFIDKVLSLRDGSDIHKFSISDGYASNKDVFRWITSAVTQHVQE 189
           MN +++VL LRD S+I KF++S G         W+++AV ++V+E
Sbjct: 95  MNSVERVLLLRDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKE 139


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
 Frame = -1

Query: 512 ENTTGNDRISGLPDALLHQILSFLDMTQVVHTSLLSKRWKYLWKSTPNLNFPTVYYKKSS 333
           E  +G   I  LPDALL  ILSFL     V TS+LSK+W +LWKST NL F  +   K  
Sbjct: 20  ETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFFGLKSPKRK 79

Query: 332 TWTMNFIDKVLSLRDGSDIHKFSISDGYASNKD-VFRWITSAVTQHVQECHLE 177
            + M+F+D+VL+LR  S+I +F +S     +   V  WI++AV ++V++ +LE
Sbjct: 80  LF-MDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLE 131


>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
 Frame = -1

Query: 500 GNDRISGLPDALLHQILSFLDMTQVVHTSLLSKRWKYLWKSTPNLNFPTVYYKKSSTWTM 321
           G DR+S LPD LLH ++SFL M +VV TSLLS RW+++W+STP +      +   S    
Sbjct: 20  GVDRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRIDGAEFMDKSK-LE 78

Query: 320 NFIDKVLSLRD-GSDIHKFSISDGYASNKDVFRWITSAVTQHVQECH------LEWIHVF 162
           NF+D +L L D  + + K  IS     +     WI  A+   V+  H      L+   +F
Sbjct: 79  NFVDCLLLLHDYTASLDKARISLHCIDHTKCSVWIRHAIMHKVRVLHISGPLSLDKTAIF 138

Query: 161 PTSRLDRVKTLNLRFVYL-HGRSSTNKIIFDLPVVENFILYL 39
           P+  L   KT+ L+   L HG      + +D PV+E+  L L
Sbjct: 139 PSQHL---KTIRLQSAILRHG--LFRPLNYDCPVLEHLELEL 175


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = -1

Query: 512 ENTTGNDRISGLPDALLHQILSFLDMTQVVHTSLLSKRWKYLWKSTPNLNFPTVYYKKSS 333
           E ++  D IS L D++L +ILSFL M  VV TS+LSKRW++LW   PNL F    +++  
Sbjct: 68  EISSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVF---RFRRRD 124

Query: 332 TWTMNFIDKVLSLRDGSDIHKFSISDGYAS--NKDVFRWITSAVTQHVQECHLEW 174
              +N IDK L L   S I KF I   Y S     V  WI  A  ++V+E HL++
Sbjct: 125 EHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQF 179


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = -1

Query: 512 ENTTGNDRISGLPDALLHQILSFLDMTQVVHTSLLSKRWKYLWKSTPNLNFPTVYYKKSS 333
           E ++  D IS L D++L +ILSFL M  VV TS+LSKRW++LW   PNL F    +++  
Sbjct: 68  EISSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVF---RFRRRD 124

Query: 332 TWTMNFIDKVLSLRDGSDIHKFSISDGYAS--NKDVFRWITSAVTQHVQECHLEW 174
              +N IDK L L   S I KF I   Y S     V  WI  A  ++V+E HL++
Sbjct: 125 EHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQF 179


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