BLASTX nr result

ID: Cimicifuga21_contig00001381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001381
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604579.1| Ataxin-3-like protein [Medicago truncatula] ...    74   3e-11
ref|XP_003520933.1| PREDICTED: ataxin-3 homolog [Glycine max]          71   2e-10
ref|XP_002323552.1| predicted protein [Populus trichocarpa] gi|2...    69   7e-10
ref|XP_004137739.1| PREDICTED: ataxin-3 homolog [Cucumis sativus...    67   3e-09
ref|XP_003516934.1| PREDICTED: ataxin-3 homolog [Glycine max]          67   3e-09

>ref|XP_003604579.1| Ataxin-3-like protein [Medicago truncatula]
           gi|355505634|gb|AES86776.1| Ataxin-3-like protein
           [Medicago truncatula]
          Length = 330

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 4/68 (5%)
 Frame = -3

Query: 702 GQWLLPEDAQRITKTCNSTQSNPHKPSF--SQSNTNPY--QQFTESFSDLEEDDMKAAIA 535
           GQWL PEDA+RITK+CN+ Q  P +      Q ++NP+  ++  E FSD+E++D+KAAIA
Sbjct: 186 GQWLSPEDAERITKSCNAVQQAPQQQRTVERQQHSNPFLSREEAEMFSDMEDEDLKAAIA 245

Query: 534 ASLMDSIP 511
           ASLMDS P
Sbjct: 246 ASLMDSTP 253


>ref|XP_003520933.1| PREDICTED: ataxin-3 homolog [Glycine max]
          Length = 336

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 11/94 (11%)
 Frame = -3

Query: 702 GQWLLPEDAQRITKTCNSTQSNPHKPSFSQSNTNPYQQF-----TESFSDLEEDDMKAAI 538
           GQWL PEDA+RITK+CNS Q+   + +  Q N   Y QF     TE   D+E++D++AAI
Sbjct: 186 GQWLSPEDAERITKSCNSVQAPHQRVNERQQN---YDQFLSHGETEMLLDMEDEDLRAAI 242

Query: 537 AASLMDSIP------AAGSRTDITSSPAPAGTES 454
           AASLMDS P      A+  + D  SS   A TE+
Sbjct: 243 AASLMDSSPVVTNAEASTPQNDNQSSKQVATTEA 276


>ref|XP_002323552.1| predicted protein [Populus trichocarpa] gi|222868182|gb|EEF05313.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 39/76 (51%), Positives = 52/76 (68%)
 Frame = -3

Query: 702 GQWLLPEDAQRITKTCNSTQSNPHKPSFSQSNTNPYQQFTESFSDLEEDDMKAAIAASLM 523
           GQWL PEDA+RI K+CN+TQS P + + +Q ++NPYQ   E   ++E+ DMKAAIAASLM
Sbjct: 191 GQWLSPEDAERIIKSCNNTQS-PQRINSTQQDSNPYQ---EILLEMEDQDMKAAIAASLM 246

Query: 522 DSIPAAGSRTDITSSP 475
           +  P+       T SP
Sbjct: 247 E--PSQSMSRVETGSP 260


>ref|XP_004137739.1| PREDICTED: ataxin-3 homolog [Cucumis sativus]
           gi|449483438|ref|XP_004156591.1| PREDICTED: ataxin-3
           homolog [Cucumis sativus]
          Length = 426

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
 Frame = -3

Query: 702 GQWLLPEDAQRITKTCNSTQSNPHKPSFS---QSNTNPYQQFTESFSDLEEDDMKAAIAA 532
           GQWL PEDA+RITK+CNSTQ+ P     +   Q +T      TE   D+E++D+KAAIAA
Sbjct: 187 GQWLSPEDAERITKSCNSTQAPPPPQRANWTEQQDTFLSSGETEMLIDMEDEDLKAAIAA 246

Query: 531 SLMDS--IPAAG 502
           SLMDS  + AAG
Sbjct: 247 SLMDSSAVMAAG 258


>ref|XP_003516934.1| PREDICTED: ataxin-3 homolog [Glycine max]
          Length = 338

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
 Frame = -3

Query: 702 GQWLLPEDAQRITKTCNSTQSNPHKPSFSQSNTNPYQQF-----TESFSDLEEDDMKAAI 538
           GQWL PEDA+RITK+CNS Q+ PH P  ++   + Y QF      E   D+E++D++AAI
Sbjct: 185 GQWLSPEDAERITKSCNSVQA-PH-PRVNEHQQH-YDQFLSHGENEMLLDMEDEDLRAAI 241

Query: 537 AASLMDSIPAAGS------RTDITSSPAPAGTES 454
           AASLMDS PA  +      + D  SS   A TE+
Sbjct: 242 AASLMDSSPAVTNAEASTPQNDNHSSKQVATTEA 275


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