BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001363
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547867.1| PREDICTED: 40S ribosomal protein SA-like [Gl...   271   4e-71
ref|NP_001237424.1| 40S ribosomal protein SA [Glycine max] gi|33...   271   4e-71
ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g...   271   5e-71
gb|ACG27786.1| 40S ribosomal protein SA [Zea mays]                    271   5e-71
gb|ACF87427.1| unknown [Zea mays] gi|414590885|tpg|DAA41456.1| T...   271   5e-71

>ref|XP_003547867.1| PREDICTED: 40S ribosomal protein SA-like [Glycine max]
          Length = 311

 Score =  271 bits (693), Expect = 4e-71
 Identities = 136/156 (87%), Positives = 144/156 (92%)
 Frame = +3

Query: 45  VASKTLIMAAPTTTAPKILTQREADIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIFII 224
           +A+ T   AAP    P+ L+Q+EADIQMMLAADVHLGTKNCDFQMERY+FKRR DGI+II
Sbjct: 1   MATTTNAAAAP----PRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYII 56

Query: 225 NLGKTWEKLQMAARVIVAIENPHDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFT 404
           NLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFT
Sbjct: 57  NLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFT 116

Query: 405 NQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTI 512
           NQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTI
Sbjct: 117 NQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTI 152


>ref|NP_001237424.1| 40S ribosomal protein SA [Glycine max]
           gi|3334320|sp|O22518.1|RSSA_SOYBN RecName: Full=40S
           ribosomal protein SA; AltName: Full=p40
           gi|2444420|gb|AAB82659.1| ribosome-associated protein
           p40 [Glycine max]
          Length = 310

 Score =  271 bits (693), Expect = 4e-71
 Identities = 136/156 (87%), Positives = 144/156 (92%)
 Frame = +3

Query: 45  VASKTLIMAAPTTTAPKILTQREADIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIFII 224
           +A+ T   AAP    P+ L+Q+EADIQMMLAADVHLGTKNCDFQMERY+FKRR DGI+II
Sbjct: 1   MATATNAAAAP----PRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYII 56

Query: 225 NLGKTWEKLQMAARVIVAIENPHDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFT 404
           NLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFT
Sbjct: 57  NLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFT 116

Query: 405 NQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTI 512
           NQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTI
Sbjct: 117 NQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTI 152


>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] gi|313103629|pdb|3IZ6|A
           Chain A, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|33146943|dbj|BAC79991.1|
           putative 40S ribosomal protein [Oryza sativa Japonica
           Group] gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza
           sativa Japonica Group] gi|125601085|gb|EAZ40661.1|
           hypothetical protein OsJ_25132 [Oryza sativa Japonica
           Group] gi|215678910|dbj|BAG96340.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215734975|dbj|BAG95697.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740977|dbj|BAG97472.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764959|dbj|BAG86656.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  271 bits (692), Expect = 5e-71
 Identities = 134/149 (89%), Positives = 140/149 (93%)
 Frame = +3

Query: 66  MAAPTTTAPKILTQREADIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIFIINLGKTWE 245
           MAA    A + L+QRE DIQMMLAADVHLGTKNCDFQMERYV+KRRTDGI+IINLGKTWE
Sbjct: 1   MAAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWE 60

Query: 246 KLQMAARVIVAIENPHDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSF 425
           KLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSF
Sbjct: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120

Query: 426 SEPRLLILTDPRTDHQPIKEAALGNIPTI 512
           SEPRLLILTDPRTDHQPIKE+ALGNIPTI
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTI 149


>gb|ACG27786.1| 40S ribosomal protein SA [Zea mays]
          Length = 307

 Score =  271 bits (692), Expect = 5e-71
 Identities = 132/148 (89%), Positives = 140/148 (94%)
 Frame = +3

Query: 69  AAPTTTAPKILTQREADIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIFIINLGKTWEK 248
           AAP    P+ L+QRE DIQMMLAADVHLGTKNCDFQ+ERYV+KRRTDGI+IINLGKTW+K
Sbjct: 3   AAPAGGGPRALSQREQDIQMMLAADVHLGTKNCDFQVERYVYKRRTDGIYIINLGKTWDK 62

Query: 249 LQMAARVIVAIENPHDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFS 428
           LQ+AARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFS
Sbjct: 63  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122

Query: 429 EPRLLILTDPRTDHQPIKEAALGNIPTI 512
           EPRLLILTDPRTDHQPIKE+ALGNIPTI
Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTI 150


>gb|ACF87427.1| unknown [Zea mays] gi|414590885|tpg|DAA41456.1| TPA: 40S ribosomal
           protein SA isoform 1 [Zea mays]
           gi|414590886|tpg|DAA41457.1| TPA: 40S ribosomal protein
           SA isoform 2 [Zea mays]
          Length = 307

 Score =  271 bits (692), Expect = 5e-71
 Identities = 132/148 (89%), Positives = 140/148 (94%)
 Frame = +3

Query: 69  AAPTTTAPKILTQREADIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIFIINLGKTWEK 248
           AAP    P+ L+QRE DIQMMLAADVHLGTKNCDFQ+ERYV+KRRTDGI+IINLGKTW+K
Sbjct: 3   AAPAGGGPRALSQREQDIQMMLAADVHLGTKNCDFQVERYVYKRRTDGIYIINLGKTWDK 62

Query: 249 LQMAARVIVAIENPHDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFS 428
           LQ+AARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFS
Sbjct: 63  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122

Query: 429 EPRLLILTDPRTDHQPIKEAALGNIPTI 512
           EPRLLILTDPRTDHQPIKE+ALGNIPTI
Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTI 150