BLASTX nr result
ID: Cimicifuga21_contig00001333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001333
(2320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004142856.1| PREDICTED: structural maintenance of chromos... 96 9e-23
ref|XP_004167578.1| PREDICTED: structural maintenance of chromos... 96 9e-23
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos... 93 7e-22
emb|CBI22212.3| unnamed protein product [Vitis vinifera] 93 7e-22
ref|XP_002323859.1| condensin complex components subunit [Populu... 92 1e-20
>ref|XP_004142856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Cucumis sativus]
Length = 1046
Score = 75.1 bits (183), Expect(2) = 9e-23
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = -1
Query: 2320 AKYDVALSTACPDLDYIVVETTGAAIA*VKLLRRKDLGVATFMILE 2183
AKYDVA+STACP LDYIVVET+GAA A V+LLRR++LGVATFMILE
Sbjct: 373 AKYDVAISTACPGLDYIVVETSGAAQACVELLRRENLGVATFMILE 418
Score = 60.5 bits (145), Expect(2) = 9e-23
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = -2
Query: 2175 TQIEGKVNPPEGMPRLLDLVEVRGDCMKLAYFKEPGNTVVAKDHEQ-QMFSLGGDAELDQ 1999
++++ KV+ PEG+PRL DL++V+ D MKLA+F GNTVVAKD EQ + GG+ + +
Sbjct: 425 SKLKAKVSTPEGVPRLFDLIKVQDDRMKLAFFAALGNTVVAKDLEQATRIAYGGNRDFRR 484
Query: 1998 LDPLD 1984
+ LD
Sbjct: 485 VVTLD 489
Score = 82.4 bits (202), Expect(2) = 1e-18
Identities = 49/88 (55%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = -2
Query: 2124 DLVEVRGDCMK---LAYFKEPGNTVVAKDHEQ-QMFSLGGDAELDQLDPLDPFFKGVVFG 1957
D+V+ + D +K L F NT+ K E QM +LGGDAEL+ +D LDPF +GVVF
Sbjct: 875 DIVKKQYDELKKKRLDEFMSGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFS 934
Query: 1956 VRPPKKGWKFFYNLSGG*KQLGSLALVF 1873
VRPPKK WK NLSGG K L SLALVF
Sbjct: 935 VRPPKKSWKNIANLSGGEKTLSSLALVF 962
Score = 39.3 bits (90), Expect(2) = 1e-18
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3
Query: 1874 FALHHYKPTSLYVMADINAAL 1812
FALHHYKPT LYVM +I+AAL
Sbjct: 962 FALHHYKPTPLYVMDEIDAAL 982
Score = 95.5 bits (236), Expect = 6e-17
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = -3
Query: 1736 TQIEGKVNPPEGMPRLLDLVEVRGDRIKLAYFKELGNTVVAKDHEQAMRIAYGENTEFSR 1557
++++ KV+ PEG+PRL DL++V+ DR+KLA+F LGNTVVAKD EQA RIAYG N +F R
Sbjct: 425 SKLKAKVSTPEGVPRLFDLIKVQDDRMKLAFFAALGNTVVAKDLEQATRIAYGGNRDFRR 484
Query: 1556 VVTLDGALFE 1527
VVTLDGAL E
Sbjct: 485 VVTLDGALLE 494
>ref|XP_004167578.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Cucumis sativus]
Length = 683
Score = 75.1 bits (183), Expect(2) = 9e-23
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = -1
Query: 2320 AKYDVALSTACPDLDYIVVETTGAAIA*VKLLRRKDLGVATFMILE 2183
AKYDVA+STACP LDYIVVET+GAA A V+LLRR++LGVATFMILE
Sbjct: 10 AKYDVAISTACPGLDYIVVETSGAAQACVELLRRENLGVATFMILE 55
Score = 60.5 bits (145), Expect(2) = 9e-23
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = -2
Query: 2175 TQIEGKVNPPEGMPRLLDLVEVRGDCMKLAYFKEPGNTVVAKDHEQ-QMFSLGGDAELDQ 1999
++++ KV+ PEG+PRL DL++V+ D MKLA+F GNTVVAKD EQ + GG+ + +
Sbjct: 62 SKLKAKVSTPEGVPRLFDLIKVQDDRMKLAFFAALGNTVVAKDLEQATRIAYGGNRDFRR 121
Query: 1998 LDPLD 1984
+ LD
Sbjct: 122 VVTLD 126
Score = 81.6 bits (200), Expect(2) = 2e-18
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = -2
Query: 2094 KLAYFKEPGNTVVAKDHEQ-QMFSLGGDAELDQLDPLDPFFKGVVFGVRPPKKGWKFFYN 1918
+L F NT+ K E QM +LGGDAEL+ +D LDPF +GVVF VRPPKK WK N
Sbjct: 525 RLDEFMSGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIAN 584
Query: 1917 LSGG*KQLGSLALVF 1873
LSGG K L SLALVF
Sbjct: 585 LSGGEKTLSSLALVF 599
Score = 39.3 bits (90), Expect(2) = 2e-18
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3
Query: 1874 FALHHYKPTSLYVMADINAAL 1812
FALHHYKPT LYVM +I+AAL
Sbjct: 599 FALHHYKPTPLYVMDEIDAAL 619
Score = 95.5 bits (236), Expect = 6e-17
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = -3
Query: 1736 TQIEGKVNPPEGMPRLLDLVEVRGDRIKLAYFKELGNTVVAKDHEQAMRIAYGENTEFSR 1557
++++ KV+ PEG+PRL DL++V+ DR+KLA+F LGNTVVAKD EQA RIAYG N +F R
Sbjct: 62 SKLKAKVSTPEGVPRLFDLIKVQDDRMKLAFFAALGNTVVAKDLEQATRIAYGGNRDFRR 121
Query: 1556 VVTLDGALFE 1527
VVTLDGAL E
Sbjct: 122 VVTLDGALLE 131
>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Vitis vinifera]
Length = 1486
Score = 76.6 bits (187), Expect(2) = 7e-22
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 2320 AKYDVALSTACPDLDYIVVETTGAAIA*VKLLRRKDLGVATFMILE 2183
AKYDVA+STACP L+YIVVETTGAA A V+LLRRK+LGVATFMILE
Sbjct: 812 AKYDVAISTACPGLEYIVVETTGAAQACVELLRRKNLGVATFMILE 857
Score = 55.8 bits (133), Expect(2) = 7e-22
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = -2
Query: 2172 QIEGKVNPPEGMPRLLDLVEVRGDCMKLAYFKEPGNTVVAKDHEQ-QMFSLGGDAELDQL 1996
+++ KV+ PEG+PRL DL++++ + MKLA+F GNTVVAKD +Q + GG+ E ++
Sbjct: 865 RMKDKVSTPEGVPRLFDLIKIQDERMKLAFFAALGNTVVAKDIDQATRIAYGGNKEFRRV 924
Query: 1995 DPLD 1984
L+
Sbjct: 925 VTLE 928
Score = 79.3 bits (194), Expect(2) = 9e-18
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -2
Query: 2037 QMFSLGGDAELDQLDPLDPFFKGVVFGVRPPKKGWKFFYNLSGG*KQLGSLALVF 1873
QM +LGGDAEL+ +D LDPF +GVVF VRPPKK WK NLSGG K L SLALVF
Sbjct: 1348 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVF 1402
Score = 39.3 bits (90), Expect(2) = 9e-18
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3
Query: 1874 FALHHYKPTSLYVMADINAAL 1812
FALHHYKPT LYVM +I+AAL
Sbjct: 1402 FALHHYKPTPLYVMDEIDAAL 1422
Score = 93.2 bits (230), Expect = 3e-16
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = -3
Query: 1733 QIEGKVNPPEGMPRLLDLVEVRGDRIKLAYFKELGNTVVAKDHEQAMRIAYGENTEFSRV 1554
+++ KV+ PEG+PRL DL++++ +R+KLA+F LGNTVVAKD +QA RIAYG N EF RV
Sbjct: 865 RMKDKVSTPEGVPRLFDLIKIQDERMKLAFFAALGNTVVAKDIDQATRIAYGGNKEFRRV 924
Query: 1553 VTLDGALFE 1527
VTL+GALFE
Sbjct: 925 VTLEGALFE 933
>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
Length = 1253
Score = 76.6 bits (187), Expect(2) = 7e-22
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 2320 AKYDVALSTACPDLDYIVVETTGAAIA*VKLLRRKDLGVATFMILE 2183
AKYDVA+STACP L+YIVVETTGAA A V+LLRRK+LGVATFMILE
Sbjct: 573 AKYDVAISTACPGLEYIVVETTGAAQACVELLRRKNLGVATFMILE 618
Score = 55.8 bits (133), Expect(2) = 7e-22
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = -2
Query: 2172 QIEGKVNPPEGMPRLLDLVEVRGDCMKLAYFKEPGNTVVAKDHEQ-QMFSLGGDAELDQL 1996
+++ KV+ PEG+PRL DL++++ + MKLA+F GNTVVAKD +Q + GG+ E ++
Sbjct: 626 RMKDKVSTPEGVPRLFDLIKIQDERMKLAFFAALGNTVVAKDIDQATRIAYGGNKEFRRV 685
Query: 1995 DPLD 1984
L+
Sbjct: 686 VTLE 689
Score = 79.3 bits (194), Expect(2) = 9e-18
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -2
Query: 2037 QMFSLGGDAELDQLDPLDPFFKGVVFGVRPPKKGWKFFYNLSGG*KQLGSLALVF 1873
QM +LGGDAEL+ +D LDPF +GVVF VRPPKK WK NLSGG K L SLALVF
Sbjct: 1115 QMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVF 1169
Score = 39.3 bits (90), Expect(2) = 9e-18
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3
Query: 1874 FALHHYKPTSLYVMADINAAL 1812
FALHHYKPT LYVM +I+AAL
Sbjct: 1169 FALHHYKPTPLYVMDEIDAAL 1189
Score = 93.2 bits (230), Expect = 3e-16
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = -3
Query: 1733 QIEGKVNPPEGMPRLLDLVEVRGDRIKLAYFKELGNTVVAKDHEQAMRIAYGENTEFSRV 1554
+++ KV+ PEG+PRL DL++++ +R+KLA+F LGNTVVAKD +QA RIAYG N EF RV
Sbjct: 626 RMKDKVSTPEGVPRLFDLIKIQDERMKLAFFAALGNTVVAKDIDQATRIAYGGNKEFRRV 685
Query: 1553 VTLDGALFE 1527
VTL+GALFE
Sbjct: 686 VTLEGALFE 694
>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
gi|222866861|gb|EEF03992.1| condensin complex components
subunit [Populus trichocarpa]
Length = 1256
Score = 73.6 bits (179), Expect(2) = 1e-20
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = -1
Query: 2320 AKYDVALSTACPDLDYIVVETTGAAIA*VKLLRRKDLGVATFMILE 2183
AKYDVA+STACP LDYIVVETT AA A V+LLRR+ LGVATFMILE
Sbjct: 576 AKYDVAISTACPGLDYIVVETTAAAQACVELLRREKLGVATFMILE 621
Score = 54.7 bits (130), Expect(2) = 1e-20
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -2
Query: 2175 TQIEGKVNPPEGMPRLLDLVEVRGDCMKLAYFKEPGNTVVAKDHEQ-QMFSLGGDAELDQ 1999
++++ V+ PEG+PRL DLV V+ + MKLA++ GNTVVAKD +Q + GG+ E +
Sbjct: 628 SKMKHNVSTPEGVPRLFDLVRVQDERMKLAFYAALGNTVVAKDLDQATRIAYGGNLEFRR 687
Query: 1998 LDPLD 1984
+ LD
Sbjct: 688 VVTLD 692
Score = 80.9 bits (198), Expect(2) = 3e-18
Identities = 43/66 (65%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -2
Query: 2067 NTVVAKDHEQ-QMFSLGGDAELDQLDPLDPFFKGVVFGVRPPKKGWKFFYNLSGG*KQLG 1891
NT+ K E QM +LGGDAEL+ +D LDPF +GVVF VRPPKK WK NLSGG K L
Sbjct: 1107 NTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLS 1166
Query: 1890 SLALVF 1873
SLALVF
Sbjct: 1167 SLALVF 1172
Score = 39.3 bits (90), Expect(2) = 3e-18
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3
Query: 1874 FALHHYKPTSLYVMADINAAL 1812
FALHHYKPT LYVM +I+AAL
Sbjct: 1172 FALHHYKPTPLYVMDEIDAAL 1192
Score = 92.0 bits (227), Expect = 6e-16
Identities = 45/70 (64%), Positives = 57/70 (81%)
Frame = -3
Query: 1736 TQIEGKVNPPEGMPRLLDLVEVRGDRIKLAYFKELGNTVVAKDHEQAMRIAYGENTEFSR 1557
++++ V+ PEG+PRL DLV V+ +R+KLA++ LGNTVVAKD +QA RIAYG N EF R
Sbjct: 628 SKMKHNVSTPEGVPRLFDLVRVQDERMKLAFYAALGNTVVAKDLDQATRIAYGGNLEFRR 687
Query: 1556 VVTLDGALFE 1527
VVTLDGALFE
Sbjct: 688 VVTLDGALFE 697