BLASTX nr result

ID: Cimicifuga21_contig00001331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001331
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Viti...   132   3e-29
emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]   132   3e-29
ref|XP_004165109.1| PREDICTED: clathrin light chain 2-like [Cucu...    71   9e-11
ref|XP_004147885.1| PREDICTED: clathrin light chain 3-like [Cucu...    69   4e-10
ref|XP_003516355.1| PREDICTED: uncharacterized protein LOC100783...    59   5e-07

>ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Vitis vinifera]
          Length = 319

 Score =  132 bits (332), Expect = 3e-29
 Identities = 84/173 (48%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
 Frame = +3

Query: 72  MESFNHSYVQDSDESRPASSA--RPFDDDGYLGFS----SQRFDSFTNFGDSESVKDPLD 233
           M SF  S+ Q  DESRPA++A  RPFDDDGYLG+     SQRFDSFTNF DSESVK+ ++
Sbjct: 1   MASFTDSFGQPGDESRPAAAASTRPFDDDGYLGYDPRLPSQRFDSFTNFADSESVKESVE 60

Query: 234 DSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDVFPAQSIPDT--PPSIY----GTS 395
           DS                                DDVF +Q IPDT  PP IY    G +
Sbjct: 61  DS---------------------PIYNSASYAAADDVFTSQPIPDTPSPPPIYVSGGGFA 99

Query: 396 SD---FPPFSPEVNGGGFDDGFVQSDGPILXXXXXXXXXQGFALREWRRLNAI 545
           +D   F  FSPE NG  FD+GF  SDGPIL         +GFALREWRR NAI
Sbjct: 100 ADQHEFSSFSPEANGKVFDEGFAGSDGPILPPPTEMQSEEGFALREWRRQNAI 152


>emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]
          Length = 319

 Score =  132 bits (332), Expect = 3e-29
 Identities = 84/173 (48%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
 Frame = +3

Query: 72  MESFNHSYVQDSDESRPASSA--RPFDDDGYLGFS----SQRFDSFTNFGDSESVKDPLD 233
           M SF  S+ Q  DESRPA++A  RPFDDDGYLG+     SQRFDSFTNF DSESVK+ ++
Sbjct: 1   MASFTDSFGQPGDESRPAAAASTRPFDDDGYLGYDPRLPSQRFDSFTNFADSESVKESVE 60

Query: 234 DSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDVFPAQSIPDT--PPSIY----GTS 395
           DS                                DDVF +Q IPDT  PP IY    G +
Sbjct: 61  DS---------------------PIYNSASYAAADDVFTSQPIPDTPSPPPIYVSGGGFA 99

Query: 396 SD---FPPFSPEVNGGGFDDGFVQSDGPILXXXXXXXXXQGFALREWRRLNAI 545
           +D   F  FSPE NG  FD+GF  SDGPIL         +GFALREWRR NAI
Sbjct: 100 ADQHEFSSFSPEANGKVFDEGFAGSDGPILPPPTEMQSEEGFALREWRRQNAI 152


>ref|XP_004165109.1| PREDICTED: clathrin light chain 2-like [Cucumis sativus]
          Length = 290

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 52/142 (36%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
 Frame = +3

Query: 138 PFDDDGYLGF----SSQRFDSFTNFGDSESVKD--PLDDSVPXXXXXXXXXXXXXXXXXX 299
           PFDD   +GF    +SQRF++F+ F ++ES  D  P+  ++P                  
Sbjct: 11  PFDD-ATIGFEPRLASQRFETFSTF-EAESADDSSPIFGNLPYDQ--------------- 53

Query: 300 XXXXXXXXXXGGDDVFPAQSIPDTPPSIYGTSSDFPPFSPEVNGGGFDDGFVQSDGPILX 479
                      GD V P      TPP+ +     F  FS + NG GFD GF +SDGPIL 
Sbjct: 54  -----------GDGVEP------TPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILS 96

Query: 480 XXXXXXXXQGFALREWRRLNAI 545
                   +GF LREWRRLNAI
Sbjct: 97  SPTAMEPEEGFPLREWRRLNAI 118


>ref|XP_004147885.1| PREDICTED: clathrin light chain 3-like [Cucumis sativus]
          Length = 290

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 52/142 (36%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
 Frame = +3

Query: 138 PFDDDGYLGF----SSQRFDSFTNFGDSESVKD--PLDDSVPXXXXXXXXXXXXXXXXXX 299
           PFDD    GF    +SQRF++F+ F ++ES  D  P+  ++P                  
Sbjct: 11  PFDD-ATNGFEPRLASQRFETFSTF-EAESADDSSPIFGNLPYDQ--------------- 53

Query: 300 XXXXXXXXXXGGDDVFPAQSIPDTPPSIYGTSSDFPPFSPEVNGGGFDDGFVQSDGPILX 479
                      GD V P      TPP+ +     F  FS + NG GFD GF +SDGPIL 
Sbjct: 54  -----------GDGVEP------TPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILS 96

Query: 480 XXXXXXXXQGFALREWRRLNAI 545
                   +GF LREWRRLNAI
Sbjct: 97  SPTAMEPEEGFPLREWRRLNAI 118


>ref|XP_003516355.1| PREDICTED: uncharacterized protein LOC100783050 [Glycine max]
          Length = 260

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 31/59 (52%), Positives = 35/59 (59%)
 Frame = +3

Query: 369 TPPSIYGTSSDFPPFSPEVNGGGFDDGFVQSDGPILXXXXXXXXXQGFALREWRRLNAI 545
           +PP IY  ++    FSPE NG G D GF  SDGPIL         +GFALREWR  NAI
Sbjct: 39  SPPPIYSVAA----FSPEQNGKGVDGGFGASDGPILPPPTNMVAKEGFALREWRMQNAI 93


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