BLASTX nr result

ID: Cimicifuga21_contig00001299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001299
         (1399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15278.3| unnamed protein product [Vitis vinifera]              299   1e-78
ref|XP_002267093.1| PREDICTED: uncharacterized protein LOC100260...   299   1e-78
ref|XP_002322125.1| predicted protein [Populus trichocarpa] gi|2...   290   5e-76
gb|AAM65297.1| unknown [Arabidopsis thaliana]                         281   3e-73
ref|NP_201078.1| HPP integral membrane domain-containing protein...   281   3e-73

>emb|CBI15278.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  299 bits (765), Expect = 1e-78
 Identities = 145/190 (76%), Positives = 165/190 (86%), Gaps = 1/190 (0%)
 Frame = +1

Query: 205 STRINRSRYKSTVVIASSNTADSFIDSWKPN-NAATPPLSDIVWPSAGAFAAMAILGKMD 381
           S +I+R R +   ++ASSN A  F D WKP  ++A P LSDI+WPSAGAFAAMAILGKMD
Sbjct: 37  SRKIDRRR-RDFGIVASSNVAAPFWDGWKPEKSSAAPSLSDILWPSAGAFAAMAILGKMD 95

Query: 382 QMLAPRGISMSVAPLGAVCAILFVSPSAPAARKYNMFMAQIACAAIGVLAFSVFGPGWLA 561
           Q LA +GISM++APLGAVCA+LF +PS+PAARKYNMFMAQI CAAIGVLAFS+ GPGWLA
Sbjct: 96  QTLASKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLAFSLLGPGWLA 155

Query: 562 RSAALGASIAFMIYTRSIHPPAASLPIMFIDAAKFHHLNFWYALFPGATGCILLCLIQQM 741
           RS ALGASIAFMIYTRS HPPAASLP++FID AKFHHLNFWYALFPGAT CILLCLIQ+M
Sbjct: 156 RSTALGASIAFMIYTRSTHPPAASLPLLFIDGAKFHHLNFWYALFPGATACILLCLIQEM 215

Query: 742 VCYMKDNYKF 771
           VCY+K N+KF
Sbjct: 216 VCYLKQNFKF 225


>ref|XP_002267093.1| PREDICTED: uncharacterized protein LOC100260399 isoform 1 [Vitis
           vinifera]
          Length = 242

 Score =  299 bits (765), Expect = 1e-78
 Identities = 145/190 (76%), Positives = 165/190 (86%), Gaps = 1/190 (0%)
 Frame = +1

Query: 205 STRINRSRYKSTVVIASSNTADSFIDSWKPN-NAATPPLSDIVWPSAGAFAAMAILGKMD 381
           S +I+R R +   ++ASSN A  F D WKP  ++A P LSDI+WPSAGAFAAMAILGKMD
Sbjct: 54  SRKIDRRR-RDFGIVASSNVAAPFWDGWKPEKSSAAPSLSDILWPSAGAFAAMAILGKMD 112

Query: 382 QMLAPRGISMSVAPLGAVCAILFVSPSAPAARKYNMFMAQIACAAIGVLAFSVFGPGWLA 561
           Q LA +GISM++APLGAVCA+LF +PS+PAARKYNMFMAQI CAAIGVLAFS+ GPGWLA
Sbjct: 113 QTLASKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLAFSLLGPGWLA 172

Query: 562 RSAALGASIAFMIYTRSIHPPAASLPIMFIDAAKFHHLNFWYALFPGATGCILLCLIQQM 741
           RS ALGASIAFMIYTRS HPPAASLP++FID AKFHHLNFWYALFPGAT CILLCLIQ+M
Sbjct: 173 RSTALGASIAFMIYTRSTHPPAASLPLLFIDGAKFHHLNFWYALFPGATACILLCLIQEM 232

Query: 742 VCYMKDNYKF 771
           VCY+K N+KF
Sbjct: 233 VCYLKQNFKF 242


>ref|XP_002322125.1| predicted protein [Populus trichocarpa] gi|222869121|gb|EEF06252.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  290 bits (743), Expect = 5e-76
 Identities = 138/191 (72%), Positives = 165/191 (86%), Gaps = 2/191 (1%)
 Frame = +1

Query: 205 STRINRSRYKSTVVIASSNTADSFIDSWKPNN--AATPPLSDIVWPSAGAFAAMAILGKM 378
           S++I R+++    V+ASSN +    DSWKP+N  A++P  SDI WPSAGAFAAMAI GKM
Sbjct: 59  SSKITRTKHG---VVASSNVSAPLWDSWKPDNTPASSPSFSDIFWPSAGAFAAMAIFGKM 115

Query: 379 DQMLAPRGISMSVAPLGAVCAILFVSPSAPAARKYNMFMAQIACAAIGVLAFSVFGPGWL 558
           DQ+LAP+GISM++APLGAV A+LFV+PS+P ARKYNMFMAQI CAAIGV+AFS+FGP WL
Sbjct: 116 DQILAPKGISMTIAPLGAVSAVLFVTPSSPGARKYNMFMAQIGCAAIGVIAFSLFGPSWL 175

Query: 559 ARSAALGASIAFMIYTRSIHPPAASLPIMFIDAAKFHHLNFWYALFPGATGCILLCLIQQ 738
           ARS AL ASIAFM+YTRS HPPAASLP++FID A+FHHLNFWYALFPGA GCI+LCLIQ+
Sbjct: 176 ARSVALAASIAFMVYTRSTHPPAASLPLLFIDGARFHHLNFWYALFPGAAGCIILCLIQE 235

Query: 739 MVCYMKDNYKF 771
           +VCY+KDN KF
Sbjct: 236 IVCYLKDNLKF 246


>gb|AAM65297.1| unknown [Arabidopsis thaliana]
          Length = 243

 Score =  281 bits (719), Expect = 3e-73
 Identities = 133/189 (70%), Positives = 158/189 (83%), Gaps = 3/189 (1%)
 Frame = +1

Query: 214 INRSRYKSTVVIASSNTADSFIDSWKPNNAATPP---LSDIVWPSAGAFAAMAILGKMDQ 384
           +N  R  STVV ++ N      DSWKP+  A      LSD++WP+AGAFAAMA+LG+MDQ
Sbjct: 55  VNHRRRVSTVVASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALLGRMDQ 114

Query: 385 MLAPRGISMSVAPLGAVCAILFVSPSAPAARKYNMFMAQIACAAIGVLAFSVFGPGWLAR 564
           ML+P+GISMSVAPLGAV AILF++PSAPAARKYN+F+AQI CAAIGV+AFSVFGPGWLAR
Sbjct: 115 MLSPKGISMSVAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGPGWLAR 174

Query: 565 SAALGASIAFMIYTRSIHPPAASLPIMFIDAAKFHHLNFWYALFPGATGCILLCLIQQMV 744
           S AL ASIAFM+ TR+ HPPAASLP+MFID AKFHHLNFWYALFPGA  C++LCL+Q +V
Sbjct: 175 SVALAASIAFMVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAACVILCLLQSIV 234

Query: 745 CYMKDNYKF 771
           CY+K+N KF
Sbjct: 235 CYLKENMKF 243


>ref|NP_201078.1| HPP integral membrane domain-containing protein [Arabidopsis
           thaliana] gi|26449514|dbj|BAC41883.1| unknown protein
           [Arabidopsis thaliana] gi|124301076|gb|ABN04790.1|
           At5g62720 [Arabidopsis thaliana]
           gi|332010264|gb|AED97647.1| HPP integral membrane
           domain-containing protein [Arabidopsis thaliana]
          Length = 243

 Score =  281 bits (719), Expect = 3e-73
 Identities = 133/189 (70%), Positives = 158/189 (83%), Gaps = 3/189 (1%)
 Frame = +1

Query: 214 INRSRYKSTVVIASSNTADSFIDSWKPNNAATPP---LSDIVWPSAGAFAAMAILGKMDQ 384
           +N  R  STVV ++ N      DSWKP+  A      LSD++WP+AGAFAAMA+LG+MDQ
Sbjct: 55  VNHRRRVSTVVASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALLGRMDQ 114

Query: 385 MLAPRGISMSVAPLGAVCAILFVSPSAPAARKYNMFMAQIACAAIGVLAFSVFGPGWLAR 564
           ML+P+GISMSVAPLGAV AILF++PSAPAARKYN+F+AQI CAAIGV+AFSVFGPGWLAR
Sbjct: 115 MLSPKGISMSVAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGPGWLAR 174

Query: 565 SAALGASIAFMIYTRSIHPPAASLPIMFIDAAKFHHLNFWYALFPGATGCILLCLIQQMV 744
           S AL ASIAFM+ TR+ HPPAASLP+MFID AKFHHLNFWYALFPGA  C++LCL+Q +V
Sbjct: 175 SVALAASIAFMVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAACVILCLLQSIV 234

Query: 745 CYMKDNYKF 771
           CY+K+N KF
Sbjct: 235 CYLKENMKF 243


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