BLASTX nr result

ID: Cimicifuga21_contig00001290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001290
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525376.1| amsh, putative [Ricinus communis] gi|2235353...   317   5e-84
ref|XP_003631259.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   314   4e-83
ref|XP_002315693.1| predicted protein [Populus trichocarpa] gi|2...   308   2e-81
ref|XP_003517724.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   304   4e-80
ref|XP_002889820.1| hypothetical protein ARALYDRAFT_888336 [Arab...   292   2e-76

>ref|XP_002525376.1| amsh, putative [Ricinus communis] gi|223535339|gb|EEF37014.1| amsh,
           putative [Ricinus communis]
          Length = 265

 Score =  317 bits (812), Expect = 5e-84
 Identities = 155/232 (66%), Positives = 180/232 (77%), Gaps = 5/232 (2%)
 Frame = -2

Query: 985 ETKSQSIKINCVTQSSPSPVLTYIQSVPEAAQISHIVXXXXXXXXXXXSC-----QDVHI 821
           E K   I ++ VTQSSPSP+L+ ++  P+ A IS I                   QD+HI
Sbjct: 34  EGKCPQITVHTVTQSSPSPILSCVEKAPKHAHISPIPAAGSNTNPCNQPSSSNILQDIHI 93

Query: 820 SVRLMEDFLELASDNTNKDLETCGVLGAYLKNGVFYVTTLIIPKQETTSSSCQALNEEEI 641
           S RLMEDFLELA +NT KDLETCGVL A+L+ G +YVTTLIIPKQ +TSSSC+A+ EEE 
Sbjct: 94  SERLMEDFLELARENTEKDLETCGVLSAFLEMGTYYVTTLIIPKQNSTSSSCEAIKEEEF 153

Query: 640 YAIQSEHSLFPLGWIHTHPSQTCFMSSIDLHTQYCYQIMLPEAMAIVMAPTDSTRSYGIF 461
           +AIQ+E SL P+GWIHTHPSQ+CFMSSIDLHTQY YQ+M+PEA AIVMAPTD++RSYG+F
Sbjct: 154 FAIQNERSLHPVGWIHTHPSQSCFMSSIDLHTQYSYQVMVPEAFAIVMAPTDTSRSYGLF 213

Query: 460 RLSDPGGTTVLKECQERGFHPHQEPSDGSPIYEDCSNVYFNPNLRFEIFDLR 305
           RLSDPGG  VLKECQE GFHPH EP+DG PIYE CSNVY N NLRFEIFDLR
Sbjct: 214 RLSDPGGMGVLKECQETGFHPHGEPADGGPIYEHCSNVYANSNLRFEIFDLR 265


>ref|XP_003631259.1| PREDICTED: AMSH-like ubiquitin thiolesterase 2-like [Vitis
           vinifera] gi|297739036|emb|CBI28525.3| unnamed protein
           product [Vitis vinifera]
          Length = 275

 Score =  314 bits (804), Expect = 4e-83
 Identities = 152/229 (66%), Positives = 177/229 (77%), Gaps = 8/229 (3%)
 Frame = -2

Query: 967 IKINCVTQSSPSPVLTYIQSVPEAAQISHIVXXXXXXXXXXXSC--------QDVHISVR 812
           I ++ VT++SPSP++   ++      ISHI                      QDVHIS R
Sbjct: 47  ITVHAVTKASPSPIIYCTENAHHDKHISHIEVSDSEPGHSKSCSETAVSKKLQDVHISAR 106

Query: 811 LMEDFLELASDNTNKDLETCGVLGAYLKNGVFYVTTLIIPKQETTSSSCQALNEEEIYAI 632
           LMEDFLELA DNT  DLETCG+LGA+LK G FYVTTLIIPKQE+TS+SCQA+ EEEI+AI
Sbjct: 107 LMEDFLELARDNTKNDLETCGILGAFLKMGTFYVTTLIIPKQESTSNSCQAIKEEEIFAI 166

Query: 631 QSEHSLFPLGWIHTHPSQTCFMSSIDLHTQYCYQIMLPEAMAIVMAPTDSTRSYGIFRLS 452
           Q+EHSLFP+GWIHTHPSQ+CFMSSIDLHTQY YQ+M+PEA AIVMAPTD++RSYGIFRLS
Sbjct: 167 QNEHSLFPVGWIHTHPSQSCFMSSIDLHTQYSYQVMVPEAFAIVMAPTDTSRSYGIFRLS 226

Query: 451 DPGGTTVLKECQERGFHPHQEPSDGSPIYEDCSNVYFNPNLRFEIFDLR 305
           DP G +VLK+C E GFH H EP+DG PIYE CSN+Y N NLRFEIFDLR
Sbjct: 227 DPVGMSVLKDCPEEGFHHHNEPADGGPIYEHCSNIYINSNLRFEIFDLR 275


>ref|XP_002315693.1| predicted protein [Populus trichocarpa] gi|222864733|gb|EEF01864.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  308 bits (789), Expect = 2e-81
 Identities = 149/221 (67%), Positives = 176/221 (79%), Gaps = 5/221 (2%)
 Frame = -2

Query: 952 VTQSSPSPVLTYIQSVPEAAQISHIVXXXXXXXXXXXSC-----QDVHISVRLMEDFLEL 788
           VTQ+SP P+L+ ++  P+ A +S I                   QDVHIS  LMEDFLEL
Sbjct: 1   VTQTSPCPILSCVEKAPKYAHVSLIPVADSDQSSCNQPSASGVLQDVHISPLLMEDFLEL 60

Query: 787 ASDNTNKDLETCGVLGAYLKNGVFYVTTLIIPKQETTSSSCQALNEEEIYAIQSEHSLFP 608
           A +NT KDLETCGVLGA+L++G +YVTTLIIPKQ++TSSSC+AL EEE +AIQ+E SLFP
Sbjct: 61  ARENTEKDLETCGVLGAFLEHGTYYVTTLIIPKQDSTSSSCEALKEEEFFAIQNERSLFP 120

Query: 607 LGWIHTHPSQTCFMSSIDLHTQYCYQIMLPEAMAIVMAPTDSTRSYGIFRLSDPGGTTVL 428
           +GWIHTHPSQ+CFMSSIDLHT + YQ M+PEA AIVMAPTD +RSYGIFRLSDPGG +VL
Sbjct: 121 VGWIHTHPSQSCFMSSIDLHTHFSYQAMVPEAFAIVMAPTDQSRSYGIFRLSDPGGMSVL 180

Query: 427 KECQERGFHPHQEPSDGSPIYEDCSNVYFNPNLRFEIFDLR 305
           KEC+E GFHPH EP+DGSPIYE C+NV+ N NLRFEIFDLR
Sbjct: 181 KECEESGFHPHGEPADGSPIYEHCANVFTNTNLRFEIFDLR 221


>ref|XP_003517724.1| PREDICTED: AMSH-like ubiquitin thiolesterase 2-like [Glycine max]
          Length = 291

 Score =  304 bits (778), Expect = 4e-80
 Identities = 142/230 (61%), Positives = 179/230 (77%), Gaps = 1/230 (0%)
 Frame = -2

Query: 991 AAETKSQSIKINCVTQSSPSPVLTYIQSVPEAAQISHIVXXXXXXXXXXXSCQ-DVHISV 815
           A +T ++   +  VTQS PSP L ++++VP+ AQ SH+              + DVHIS+
Sbjct: 60  AIKTANRYFLLQKVTQSWPSPALCFVETVPQDAQSSHVTAFNSGDGSSKSDNERDVHISM 119

Query: 814 RLMEDFLELASDNTNKDLETCGVLGAYLKNGVFYVTTLIIPKQETTSSSCQALNEEEIYA 635
           RLMEDFL+LA +NT KDLETCG+LGAYL+ G  Y+TTLIIPKQE+ S+SCQA NEEE++ 
Sbjct: 120 RLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYLTTLIIPKQESASNSCQATNEEEVFK 179

Query: 634 IQSEHSLFPLGWIHTHPSQTCFMSSIDLHTQYCYQIMLPEAMAIVMAPTDSTRSYGIFRL 455
           I +E SL+P+GWIHTHPSQ+CFMSS+DLHTQY YQ+M+PEA AIV+AP D++RS G+FRL
Sbjct: 180 ILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQVMIPEAFAIVLAPNDTSRSCGLFRL 239

Query: 454 SDPGGTTVLKECQERGFHPHQEPSDGSPIYEDCSNVYFNPNLRFEIFDLR 305
           + P G  +LK CQE GFHPH+EP +GSP+YE CSNVY N NLRFEIFDLR
Sbjct: 240 TKPEGMNILKNCQETGFHPHKEPDNGSPVYEHCSNVYKNSNLRFEIFDLR 289


>ref|XP_002889820.1| hypothetical protein ARALYDRAFT_888336 [Arabidopsis lyrata subsp.
           lyrata] gi|297335662|gb|EFH66079.1| hypothetical protein
           ARALYDRAFT_888336 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  292 bits (747), Expect = 2e-76
 Identities = 139/222 (62%), Positives = 175/222 (78%), Gaps = 6/222 (2%)
 Frame = -2

Query: 952 VTQSSPSPVLTYIQSVP-EAAQISHIVXXXXXXXXXXXSCQ-----DVHISVRLMEDFLE 791
           VT SSPSP L+ +++V  +++ +S ++           S +     DVHIS RL+EDF E
Sbjct: 2   VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDKNNHGESSEPKILRDVHISERLLEDFTE 61

Query: 790 LASDNTNKDLETCGVLGAYLKNGVFYVTTLIIPKQETTSSSCQALNEEEIYAIQSEHSLF 611
           LA +NT KDLETCG L A+L+ G+FYVTTLIIPKQE+TS+SCQA+NE E+++IQ+E  L+
Sbjct: 62  LARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERELY 121

Query: 610 PLGWIHTHPSQTCFMSSIDLHTQYCYQIMLPEAMAIVMAPTDSTRSYGIFRLSDPGGTTV 431
           P+GWIHTHPSQ CFMSS+DLHT Y YQ+M+PEA AIV+APTDS++SYGIF+L+DPGG  V
Sbjct: 122 PVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSYGIFKLTDPGGMEV 181

Query: 430 LKECQERGFHPHQEPSDGSPIYEDCSNVYFNPNLRFEIFDLR 305
           LK C E GFHPH+EP DG+P+YE CSNVY N NLRFEIFDLR
Sbjct: 182 LKGCSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR 223


Top