BLASTX nr result

ID: Cimicifuga21_contig00001270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001270
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277272.1| PREDICTED: 60S ribosomal protein L35a-1-like...   230   3e-58
ref|XP_002311198.1| predicted protein [Populus trichocarpa] gi|1...   226   4e-57
ref|NP_001236077.1| uncharacterized protein LOC100305997 [Glycin...   226   5e-57
ref|XP_002315206.1| predicted protein [Populus trichocarpa] gi|2...   226   6e-57
ref|XP_002312115.1| predicted protein [Populus trichocarpa] gi|1...   226   6e-57

>ref|XP_002277272.1| PREDICTED: 60S ribosomal protein L35a-1-like isoform 1 [Vitis
           vinifera] gi|225449234|ref|XP_002280039.1| PREDICTED:
           60S ribosomal protein L35a-1 [Vitis vinifera]
           gi|359481695|ref|XP_003632660.1| PREDICTED: 60S
           ribosomal protein L35a-1-like isoform 2 [Vitis vinifera]
           gi|147823354|emb|CAN64195.1| hypothetical protein
           VITISV_014336 [Vitis vinifera]
           gi|296086107|emb|CBI31548.3| unnamed protein product
           [Vitis vinifera] gi|297740261|emb|CBI30443.3| unnamed
           protein product [Vitis vinifera]
          Length = 112

 Score =  230 bits (586), Expect = 3e-58
 Identities = 109/112 (97%), Positives = 111/112 (99%)
 Frame = +3

Query: 105 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA 284
           MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA 60

Query: 285 KVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 440
           KVKKDGSH+RCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKKDGSHFRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|XP_002311198.1| predicted protein [Populus trichocarpa] gi|118483364|gb|ABK93583.1|
           unknown [Populus trichocarpa]
           gi|118484807|gb|ABK94271.1| unknown [Populus
           trichocarpa] gi|222851018|gb|EEE88565.1| predicted
           protein [Populus trichocarpa]
          Length = 112

 Score =  226 bits (577), Expect = 4e-57
 Identities = 107/112 (95%), Positives = 110/112 (98%)
 Frame = +3

Query: 105 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA 284
           MVKGRQGERVRLYVRGT+LGYKRSKSNQYPNTSLIQIEGVNTKEEVAWY GKRMAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 285 KVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 440
           KVK+DGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKRDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|NP_001236077.1| uncharacterized protein LOC100305997 [Glycine max]
           gi|255627223|gb|ACU13956.1| unknown [Glycine max]
          Length = 112

 Score =  226 bits (576), Expect = 5e-57
 Identities = 106/112 (94%), Positives = 110/112 (98%)
 Frame = +3

Query: 105 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA 284
           MVKGRQGERVRLYVRG+ILGYKRSKSNQYPNTSLIQIE VNTKEEVAWYCGKRMAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIENVNTKEEVAWYCGKRMAYIYKA 60

Query: 285 KVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 440
           KVKKDGSHYRCIWGKVTRPHGNSG+VRAKFKSNLPP+SMG +VRVFMYPSNI
Sbjct: 61  KVKKDGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112


>ref|XP_002315206.1| predicted protein [Populus trichocarpa] gi|222864246|gb|EEF01377.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  226 bits (575), Expect = 6e-57
 Identities = 107/112 (95%), Positives = 110/112 (98%)
 Frame = +3

Query: 105 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA 284
           MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWY GKRMAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 285 KVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 440
           KVK+DG+HYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKRDGTHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGCRVRVFMYPSNI 112


>ref|XP_002312115.1| predicted protein [Populus trichocarpa] gi|118488215|gb|ABK95927.1|
           unknown [Populus trichocarpa]
           gi|222851935|gb|EEE89482.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  226 bits (575), Expect = 6e-57
 Identities = 108/112 (96%), Positives = 109/112 (97%)
 Frame = +3

Query: 105 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKA 284
           MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWY GKRMAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 285 KVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 440
           KVKK GSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 61  KVKKQGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGTRVRVFMYPSNI 112


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