BLASTX nr result
ID: Cimicifuga21_contig00001267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00001267
(1507 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro... 457 e-126
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat... 457 e-126
ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 456 e-126
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat... 452 e-125
ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 451 e-124
>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
product [Vitis vinifera]
Length = 1115
Score = 457 bits (1176), Expect = e-126
Identities = 240/366 (65%), Positives = 282/366 (77%), Gaps = 3/366 (0%)
Frame = -1
Query: 1111 KKEA-LYTIIKVARNEDLVEQIGREIYFDLMDHDKVRCFRTKKQTSFSIFKEEVAKEFGI 935
K EA LYTIIKVARNEDL+EQIGR+IYFDL+DHDKVR FR +KQT F++FKEEVAKEFGI
Sbjct: 557 KAEAHLYTIIKVARNEDLIEQIGRDIYFDLVDHDKVRSFRIQKQTPFNLFKEEVAKEFGI 616
Query: 934 PVQFQRFWLWATRQNRTYRPDRPLTPQEETKSVEQLGNLRPKAY--DLKLFLEVELGLDF 761
PVQFQRFWLWA RQN TYRP+RPLT QEE +SV QL + KA +LKLFLEVELG D
Sbjct: 617 PVQFQRFWLWAKRQNHTYRPNRPLTLQEEAQSVGQLREVSNKANHAELKLFLEVELGQDL 676
Query: 760 HPIKPPRKTKEDILIFFKLYDPIKEELRYVGRLFVKGSGTPSEIFKKLNVMAGFSSMQEI 581
P+ PP KTKE+IL+FFKLYDP+KEELRYVGRLFVKGSG P EI KLN +AGFS +EI
Sbjct: 677 RPVPPPEKTKEEILLFFKLYDPLKEELRYVGRLFVKGSGKPIEILSKLNELAGFSPNEEI 736
Query: 580 ELYEEIKFEPSVMCELVDLQRSFFANQLEDGDILCFQKSHPLESGQQYRYPDIPSFLEYV 401
EL+EEIKFEP+VMCE +D + +F A+QLEDGDI+C+Q+ ++S QQ RYPD+PSFLEYV
Sbjct: 737 ELFEEIKFEPNVMCEHIDKRLTFRASQLEDGDIICYQRLLQIDSSQQCRYPDVPSFLEYV 796
Query: 400 HNRQVVHFRSREKPKENDFCLELSKIFNYDEIVERVAIQLCVHDPSKIRLXXXXXXXXXX 221
HNRQVV FRS EKPKE++FCLELSK+FNYD++VERVA L + D S
Sbjct: 797 HNRQVVRFRSLEKPKEDEFCLELSKLFNYDDVVERVAAHLGLDDSS-------------- 842
Query: 220 XXXXXXKIRLTSHDYFSRQPTPTPIKRWGLDYFSDRNDYLSDMLVDCNNVTSDILYYDVL 41
KIRLTSH+ +S+QP P PIK G+ ++LSDML+ N TSDILYY+VL
Sbjct: 843 ------KIRLTSHNCYSQQPKPQPIKYRGV-------EHLSDMLLHYNQ-TSDILYYEVL 888
Query: 40 DNPNAE 23
D P E
Sbjct: 889 DIPLPE 894
Score = 150 bits (380), Expect = 6e-34
Identities = 76/145 (52%), Positives = 110/145 (75%), Gaps = 3/145 (2%)
Frame = -1
Query: 1507 FSKLNTSKLYSKIFVVGGYKCRILILPEGREGNIDHLAIDLEVAD---LPCSSSRYAQFG 1337
FS+LNT KLYS +F VGGYK R+LI P+G N+DHL++ L+VAD LP SRYAQF
Sbjct: 61 FSRLNTKKLYSDVFYVGGYKWRVLIFPKGN--NVDHLSMYLDVADSATLPYGWSRYAQFS 118
Query: 1336 LSVVNQVYSQYTLRKDVQESDYHQFIYDKTYNGFTSFMPFSVLHNPSKGFLVDDTLIVKA 1157
L+V+NQ+++++T+RKD Q HQF ++ GFTSFMP L++P++G+LV+DT IV+A
Sbjct: 119 LAVINQIHNKFTIRKDTQ----HQFNARESDWGFTSFMPLGELYDPARGYLVNDTCIVEA 174
Query: 1156 EVSIRNVVEYFSYDSKKEALYTIIK 1082
+V++R V++Y+++DSKKE Y +K
Sbjct: 175 DVAVRRVIDYWTHDSKKETGYVGLK 199
>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
hydrolase, putative [Ricinus communis]
Length = 1109
Score = 457 bits (1175), Expect = e-126
Identities = 243/366 (66%), Positives = 278/366 (75%), Gaps = 3/366 (0%)
Frame = -1
Query: 1111 KKEA-LYTIIKVARNEDLVEQIGREIYFDLMDHDKVRCFRTKKQTSFSIFKEEVAKEFGI 935
K EA LYTIIKVAR+EDL+EQIG++IYFDL+DHDKVR FR +KQ F++FKEEV KEFGI
Sbjct: 558 KAEAHLYTIIKVARSEDLLEQIGKDIYFDLVDHDKVRSFRIQKQMPFNLFKEEVVKEFGI 617
Query: 934 PVQFQRFWLWATRQNRTYRPDRPLTPQEETKSVEQLGNLRPKAY--DLKLFLEVELGLDF 761
PVQFQRFWLWA RQN TYRP+RPLTPQEE +SV QL + KA +LKLFLEVE G D
Sbjct: 618 PVQFQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKANNAELKLFLEVEFGQDL 677
Query: 760 HPIKPPRKTKEDILIFFKLYDPIKEELRYVGRLFVKGSGTPSEIFKKLNVMAGFSSMQEI 581
PI PP KTKEDIL+FFKLYDP KEELRYVGRLFVKG+G P EI KLN MAGF+S QEI
Sbjct: 678 RPIPPPEKTKEDILLFFKLYDPSKEELRYVGRLFVKGAGKPLEILTKLNEMAGFASDQEI 737
Query: 580 ELYEEIKFEPSVMCELVDLQRSFFANQLEDGDILCFQKSHPLESGQQYRYPDIPSFLEYV 401
ELYEEIKFEP+VMCE +D + +F A+QLEDGDI+CFQKS G+Q RYPD+PSFLEYV
Sbjct: 738 ELYEEIKFEPNVMCEHIDKKLTFRASQLEDGDIVCFQKSAQDGGGEQCRYPDVPSFLEYV 797
Query: 400 HNRQVVHFRSREKPKENDFCLELSKIFNYDEIVERVAIQLCVHDPSKIRLXXXXXXXXXX 221
HNRQVV FRS EKPKE++FCLELSK+ NYD++VERVA L + DPS
Sbjct: 798 HNRQVVRFRSLEKPKEDEFCLELSKLHNYDDVVERVATHLGLDDPS-------------- 843
Query: 220 XXXXXXKIRLTSHDYFSRQPTPTPIKRWGLDYFSDRNDYLSDMLVDCNNVTSDILYYDVL 41
KIRLTSH+ +S+QP P PIK G+ D+LSDML N TSDILYY+VL
Sbjct: 844 ------KIRLTSHNCYSQQPKPQPIKYRGV-------DHLSDMLAHYNQ-TSDILYYEVL 889
Query: 40 DNPNAE 23
D P E
Sbjct: 890 DIPLPE 895
Score = 152 bits (384), Expect = 2e-34
Identities = 78/145 (53%), Positives = 108/145 (74%), Gaps = 3/145 (2%)
Frame = -1
Query: 1507 FSKLNTSKLYSKIFVVGGYKCRILILPEGREGNIDHLAIDLEVAD---LPCSSSRYAQFG 1337
FS+LNT KLYS +F+VGGYK RILI P+G N+DHL++ L+VAD LP SRYAQF
Sbjct: 62 FSRLNTKKLYSDVFIVGGYKWRILIFPKGN--NVDHLSMYLDVADSATLPYGWSRYAQFS 119
Query: 1336 LSVVNQVYSQYTLRKDVQESDYHQFIYDKTYNGFTSFMPFSVLHNPSKGFLVDDTLIVKA 1157
L VVNQ++ +Y++RKD Q HQF ++ GFTSFMP L++P +G+LV+DT +V+A
Sbjct: 120 LCVVNQIHQKYSIRKDTQ----HQFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVEA 175
Query: 1156 EVSIRNVVEYFSYDSKKEALYTIIK 1082
+V++R V++Y+S+DSKKE Y +K
Sbjct: 176 DVAVRRVIDYWSHDSKKETGYVGLK 200
>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus]
Length = 1118
Score = 456 bits (1173), Expect = e-126
Identities = 237/366 (64%), Positives = 283/366 (77%), Gaps = 3/366 (0%)
Frame = -1
Query: 1111 KKEA-LYTIIKVARNEDLVEQIGREIYFDLMDHDKVRCFRTKKQTSFSIFKEEVAKEFGI 935
K EA LYTIIKVAR+EDLVEQIG++I+FDL+DHDKVR FR +KQ F++FKEEVAKEFGI
Sbjct: 560 KAEAHLYTIIKVARDEDLVEQIGKDIFFDLVDHDKVRSFRIQKQMPFNLFKEEVAKEFGI 619
Query: 934 PVQFQRFWLWATRQNRTYRPDRPLTPQEETKSVEQLGNLRPKAY--DLKLFLEVELGLDF 761
P+QFQR+WLWA RQN TYRP+RPLTP EE +SV QL + K + +LKL LEVE G D
Sbjct: 620 PIQFQRYWLWAKRQNHTYRPNRPLTPMEEAQSVGQLREVSNKVHNAELKLLLEVEYGPDS 679
Query: 760 HPIKPPRKTKEDILIFFKLYDPIKEELRYVGRLFVKGSGTPSEIFKKLNVMAGFSSMQEI 581
PI PP KTK+DIL+FFKLY+P KEELRYVGRLFVKG+G P EI KLN MAG++ +EI
Sbjct: 680 RPIAPPDKTKDDILLFFKLYEPEKEELRYVGRLFVKGNGKPFEILTKLNEMAGYAPEEEI 739
Query: 580 ELYEEIKFEPSVMCELVDLQRSFFANQLEDGDILCFQKSHPLESGQQYRYPDIPSFLEYV 401
ELYEEIKFEP++MCE +D + +F A+QLEDGDI+CFQKS P+E+ +QYRYPD+PSFLEYV
Sbjct: 740 ELYEEIKFEPNIMCEPIDKKFTFRASQLEDGDIVCFQKSPPVENTEQYRYPDVPSFLEYV 799
Query: 400 HNRQVVHFRSREKPKENDFCLELSKIFNYDEIVERVAIQLCVHDPSKIRLXXXXXXXXXX 221
HNRQVVHFRS EKPKE+DFCLE+SK++ YDE+VER+A QL V DPS
Sbjct: 800 HNRQVVHFRSLEKPKEDDFCLEMSKLYTYDEVVERLAQQLGVDDPS-------------- 845
Query: 220 XXXXXXKIRLTSHDYFSRQPTPTPIKRWGLDYFSDRNDYLSDMLVDCNNVTSDILYYDVL 41
KIRLTSH+ +S+QP P PIK G+ ++LSDMLV N TSDILYY+VL
Sbjct: 846 ------KIRLTSHNCYSQQPKPQPIKYRGV-------EHLSDMLVHYNQ-TSDILYYEVL 891
Query: 40 DNPNAE 23
D P E
Sbjct: 892 DIPLPE 897
Score = 154 bits (388), Expect = 8e-35
Identities = 80/145 (55%), Positives = 111/145 (76%), Gaps = 3/145 (2%)
Frame = -1
Query: 1507 FSKLNTSKLYSKIFVVGGYKCRILILPEGREGNIDHLAIDLEVAD---LPCSSSRYAQFG 1337
F++LN KLYS+IF+VGGYK RILI P+G N+DHL++ L+VAD LP SRYAQF
Sbjct: 64 FTRLNIKKLYSEIFIVGGYKWRILIFPKGN--NVDHLSMYLDVADSASLPYGWSRYAQFS 121
Query: 1336 LSVVNQVYSQYTLRKDVQESDYHQFIYDKTYNGFTSFMPFSVLHNPSKGFLVDDTLIVKA 1157
L V+NQ++++Y++RKD Q HQF ++ GFTSFMP S L++P++G+LV+DTLIV+A
Sbjct: 122 LGVINQIHNKYSVRKDTQ----HQFNARESDWGFTSFMPLSELYDPTRGYLVNDTLIVEA 177
Query: 1156 EVSIRNVVEYFSYDSKKEALYTIIK 1082
EV +R VV+Y++YDSKKE + +K
Sbjct: 178 EVLVRRVVDYWTYDSKKETGFVGLK 202
>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
hydrolase, putative [Ricinus communis]
Length = 1120
Score = 452 bits (1164), Expect = e-125
Identities = 238/361 (65%), Positives = 275/361 (76%), Gaps = 2/361 (0%)
Frame = -1
Query: 1099 LYTIIKVARNEDLVEQIGREIYFDLMDHDKVRCFRTKKQTSFSIFKEEVAKEFGIPVQFQ 920
LYTIIKVAR+EDL EQIGR+IYFDL+DHDKVR FR +KQT F+ FKEEVAKEFGIPVQFQ
Sbjct: 562 LYTIIKVARDEDLKEQIGRDIYFDLVDHDKVRNFRIQKQTPFNFFKEEVAKEFGIPVQFQ 621
Query: 919 RFWLWATRQNRTYRPDRPLTPQEETKSVEQLGNLRPKAY--DLKLFLEVELGLDFHPIKP 746
RFW+WA RQN TYRP+RPLTPQEE +SV QL KA+ +LKLFLEVELGLD PI P
Sbjct: 622 RFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREASNKAHSAELKLFLEVELGLDLRPIAP 681
Query: 745 PRKTKEDILIFFKLYDPIKEELRYVGRLFVKGSGTPSEIFKKLNVMAGFSSMQEIELYEE 566
P KTKEDIL+FFKLY P K ELRY+GRLFVK SG P EI KLN MAGF++ +EIELYEE
Sbjct: 682 PDKTKEDILLFFKLYVPEKGELRYIGRLFVKSSGKPIEILAKLNEMAGFATDEEIELYEE 741
Query: 565 IKFEPSVMCELVDLQRSFFANQLEDGDILCFQKSHPLESGQQYRYPDIPSFLEYVHNRQV 386
IKFEP VMCE +D + SF +Q+EDGDI+CFQKS PLE + +YPD+PSFLEYVHNRQV
Sbjct: 742 IKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLEVEEDCKYPDVPSFLEYVHNRQV 801
Query: 385 VHFRSREKPKENDFCLELSKIFNYDEIVERVAIQLCVHDPSKIRLXXXXXXXXXXXXXXX 206
VHFRS EKPKE+DFCLELSK+ YD++VE+VA Q+ + DPS
Sbjct: 802 VHFRSLEKPKEDDFCLELSKLHTYDDVVEKVAQQIGLDDPS------------------- 842
Query: 205 XKIRLTSHDYFSRQPTPTPIKRWGLDYFSDRNDYLSDMLVDCNNVTSDILYYDVLDNPNA 26
KIRLTSH+ +S+QP P PIK G+ ++LSDMLV N TSDILYY+VLD P
Sbjct: 843 -KIRLTSHNCYSQQPKPQPIKYRGV-------EHLSDMLVHYNQ-TSDILYYEVLDIPLP 893
Query: 25 E 23
E
Sbjct: 894 E 894
Score = 156 bits (394), Expect = 2e-35
Identities = 82/145 (56%), Positives = 112/145 (77%), Gaps = 3/145 (2%)
Frame = -1
Query: 1507 FSKLNTSKLYSKIFVVGGYKCRILILPEGREGNIDHLAIDLEVAD---LPCSSSRYAQFG 1337
FS+LNT K YS +FVVGGYK RILI P+G N+DHL++ L+V+D LP SRYAQF
Sbjct: 61 FSRLNTKKHYSDVFVVGGYKWRILIFPKGN--NVDHLSMYLDVSDSSTLPYGWSRYAQFS 118
Query: 1336 LSVVNQVYSQYTLRKDVQESDYHQFIYDKTYNGFTSFMPFSVLHNPSKGFLVDDTLIVKA 1157
L+VVNQ++++Y++RKD Q HQF ++ GFTSFMP S L++PS+G+LV+DT+IV+A
Sbjct: 119 LAVVNQIHNKYSIRKDTQ----HQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVIVEA 174
Query: 1156 EVSIRNVVEYFSYDSKKEALYTIIK 1082
EV++R V++Y+SYDSKKE Y +K
Sbjct: 175 EVAVRKVLDYWSYDSKKETGYVGLK 199
>ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis vinifera]
gi|296084015|emb|CBI24403.3| unnamed protein product
[Vitis vinifera]
Length = 1116
Score = 451 bits (1160), Expect = e-124
Identities = 233/372 (62%), Positives = 278/372 (74%), Gaps = 2/372 (0%)
Frame = -1
Query: 1132 EYFSYDSKKEALYTIIKVARNEDLVEQIGREIYFDLMDHDKVRCFRTKKQTSFSIFKEEV 953
E+ + + LYTIIKVAR++DLVE IGR+IYFDL+DHDKVR FR +KQ F+ FKEEV
Sbjct: 552 EHKKKEKAESHLYTIIKVARDDDLVEHIGRDIYFDLVDHDKVRSFRIQKQMPFNFFKEEV 611
Query: 952 AKEFGIPVQFQRFWLWATRQNRTYRPDRPLTPQEETKSVEQLGNLRPKAY--DLKLFLEV 779
AKEFGIP+QFQRFWLWA RQN TYRP+RPLT EE +SV QL + K +LKLFLEV
Sbjct: 612 AKEFGIPIQFQRFWLWAKRQNHTYRPNRPLTHLEEQQSVGQLREISNKVQNAELKLFLEV 671
Query: 778 ELGLDFHPIKPPRKTKEDILIFFKLYDPIKEELRYVGRLFVKGSGTPSEIFKKLNVMAGF 599
LG D HP PP KTK+DIL+FFKLYDP KEEL YVGRLFVK +G P EI KLN M G+
Sbjct: 672 NLGPDLHPNPPPEKTKDDILLFFKLYDPEKEELNYVGRLFVKSTGKPVEILSKLNEMVGY 731
Query: 598 SSMQEIELYEEIKFEPSVMCELVDLQRSFFANQLEDGDILCFQKSHPLESGQQYRYPDIP 419
+ +EIELYEEIKF+PSVMCE +D + +F A+QLEDGDI+CFQK+ P+ESG+ +RYPD+P
Sbjct: 732 APDEEIELYEEIKFDPSVMCEPIDKKFTFRASQLEDGDIICFQKTPPIESGESFRYPDVP 791
Query: 418 SFLEYVHNRQVVHFRSREKPKENDFCLELSKIFNYDEIVERVAIQLCVHDPSKIRLXXXX 239
SFLEYVHNRQVVHFRS EKPKE+DFCLE+SK+F YD++VERVA QL + DPS
Sbjct: 792 SFLEYVHNRQVVHFRSLEKPKEDDFCLEMSKLFTYDDVVERVARQLGLDDPS-------- 843
Query: 238 XXXXXXXXXXXXKIRLTSHDYFSRQPTPTPIKRWGLDYFSDRNDYLSDMLVDCNNVTSDI 59
KIRLTSH+ +S+QP P PIK G+ D+LSDMLV N+ SD+
Sbjct: 844 ------------KIRLTSHNCYSQQPKPQPIKYRGV-------DHLSDMLVH-YNLISDV 883
Query: 58 LYYDVLDNPNAE 23
LYY+VLD P E
Sbjct: 884 LYYEVLDIPLPE 895
Score = 153 bits (387), Expect = 1e-34
Identities = 81/145 (55%), Positives = 109/145 (75%), Gaps = 3/145 (2%)
Frame = -1
Query: 1507 FSKLNTSKLYSKIFVVGGYKCRILILPEGREGNIDHLAIDLEVAD---LPCSSSRYAQFG 1337
FS+LNT K YS+ F+VGGYK R+LI P+G N++HL++ L+VAD LP SRYAQF
Sbjct: 62 FSRLNTKKHYSENFIVGGYKWRVLIFPKGN--NVEHLSMYLDVADSSSLPYGWSRYAQFS 119
Query: 1336 LSVVNQVYSQYTLRKDVQESDYHQFIYDKTYNGFTSFMPFSVLHNPSKGFLVDDTLIVKA 1157
L+VVNQ++++YT+RKD Q HQF ++ GFTSFMP S L++P +GFLV DT IV+A
Sbjct: 120 LAVVNQIHNKYTVRKDTQ----HQFNARESDWGFTSFMPLSELYDPGRGFLVSDTCIVEA 175
Query: 1156 EVSIRNVVEYFSYDSKKEALYTIIK 1082
EV++R VV+Y++YDSKKE Y +K
Sbjct: 176 EVAVRRVVDYWTYDSKKETGYVGLK 200