BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001266
         (1293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   664   0.0  
ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   662   0.0  
ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   662   0.0  
ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [...   656   0.0  
dbj|BAE71290.1| putative 60S ribosomal protein L1 [Trifolium pra...   654   0.0  

>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  664 bits (1713), Expect = 0.0
 Identities = 324/401 (80%), Positives = 350/401 (87%)
 Frame = +2

Query: 89   MASAAARPLVTIQTLEGDMATDGGNTLPLPDVMKASIRPDIVNYVHSNIAKNRRQPYAVS 268
            MA+AAARPLVT+Q L+ DMATDGGN +PLPDVMKASIRPDIV +VHSNI+KN RQPYAVS
Sbjct: 1    MAAAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVS 60

Query: 269  RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRRWHRKI 448
            RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKI
Sbjct: 61   RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 449  NINQKRYXXXXXXXXXXXXXXXXXRGHRIENVPEIPLVVSDSAEGIEKTSAAIKALKEIG 628
            N+NQKRY                 RGHRIE+VPE+PLV+ DSAE +EKTSAAI  LK++G
Sbjct: 121  NVNQKRYAVVSAIAASAIPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVG 180

Query: 629  AYPDAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGTKIVKAFRNIPGVEIANVER 808
            AYPDAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG K+VKAFRNIPGVE+ANV+R
Sbjct: 181  AYPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDR 240

Query: 809  LNLLKLAPGGHLGRFIIWTKSAFEKLDSVYGSFEKASEKKKGYVLPRSKMVNADLSRIIN 988
            LNLLKLAPGGHLGRF+IWTKSAFEKLDS+YGSFEK SEKK GY+LPRSKMVNADL+RIIN
Sbjct: 241  LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIIN 300

Query: 989  SDEVQSVVRPIKKDVKRAPMKKNPLKNLNVMLKLNPYAKTARRMALLAEEQXXXXXXXXX 1168
            SDEVQSVVRPIKK+VKRAPMKKNPLKNLN MLKLNPYAKTARRMALLAE Q         
Sbjct: 301  SDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKL 360

Query: 1169 XXXXXPVTKEEATAIKAAGKAWYQTMISDSDYTEFDNFTKW 1291
                  + KEE  AIKAAGKAWYQTMISDSDYTEFDNF+KW
Sbjct: 361  DKKRKQIPKEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKW 401


>ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449520008|ref|XP_004167026.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  662 bits (1709), Expect = 0.0
 Identities = 325/399 (81%), Positives = 354/399 (88%)
 Frame = +2

Query: 95   SAAARPLVTIQTLEGDMATDGGNTLPLPDVMKASIRPDIVNYVHSNIAKNRRQPYAVSRR 274
            +AAARPLV++Q+LEGDMATD   T+PLPDVMKASIRPDIV++VHSNI+KN RQPYAVS+R
Sbjct: 2    AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61

Query: 275  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRRWHRKINI 454
            AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+
Sbjct: 62   AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 455  NQKRYXXXXXXXXXXXXXXXXXRGHRIENVPEIPLVVSDSAEGIEKTSAAIKALKEIGAY 634
            NQKRY                 RGHRIE VPE+PLVVSDSAEG+EKTSAAIK LK++GA+
Sbjct: 122  NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181

Query: 635  PDAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGTKIVKAFRNIPGVEIANVERLN 814
            PDAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG K+VKAFRNIPGVEIANVERLN
Sbjct: 182  PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241

Query: 815  LLKLAPGGHLGRFIIWTKSAFEKLDSVYGSFEKASEKKKGYVLPRSKMVNADLSRIINSD 994
            LLKLAPGGHLGRF+IWTKSAFEKLDS+YGSFEK+SEKKKGYVLPRSKMVNADLSRIINSD
Sbjct: 242  LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301

Query: 995  EVQSVVRPIKKDVKRAPMKKNPLKNLNVMLKLNPYAKTARRMALLAEEQXXXXXXXXXXX 1174
            EVQSVV+PIKK+VKR  +KKNPLKNLN MLKLNPYAKTARRMALLAEEQ           
Sbjct: 302  EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361

Query: 1175 XXXPVTKEEATAIKAAGKAWYQTMISDSDYTEFDNFTKW 1291
                 TKE+ATAI+AAGKAWYQTMISDSDYTEF+NF+KW
Sbjct: 362  KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKW 400


>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  662 bits (1707), Expect = 0.0
 Identities = 323/399 (80%), Positives = 350/399 (87%)
 Frame = +2

Query: 95   SAAARPLVTIQTLEGDMATDGGNTLPLPDVMKASIRPDIVNYVHSNIAKNRRQPYAVSRR 274
            +AAARPLVT+Q L+ DMATDGGN +PLPDVMKASIRPDIVN+VHSNI+KN RQPYAVSRR
Sbjct: 2    AAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRR 61

Query: 275  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRRWHRKINI 454
            AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+
Sbjct: 62   AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 455  NQKRYXXXXXXXXXXXXXXXXXRGHRIENVPEIPLVVSDSAEGIEKTSAAIKALKEIGAY 634
            NQKRY                 RGHRIE+VPE+PLV+ DSAE +EKTSAAI  LK++GAY
Sbjct: 122  NQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAY 181

Query: 635  PDAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGTKIVKAFRNIPGVEIANVERLN 814
            PDAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGTEG K+VKAFRNIPGVE+ANVERLN
Sbjct: 182  PDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLN 241

Query: 815  LLKLAPGGHLGRFIIWTKSAFEKLDSVYGSFEKASEKKKGYVLPRSKMVNADLSRIINSD 994
            LLKLAPGGHLGRFIIWTKSA EK+DS+YGSF+K SEKKKGY+LPR+KMVNADL+RIINSD
Sbjct: 242  LLKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSD 301

Query: 995  EVQSVVRPIKKDVKRAPMKKNPLKNLNVMLKLNPYAKTARRMALLAEEQXXXXXXXXXXX 1174
            EVQSVVRPIKK+VKRAPMKKNPLKNLN MLKLNPYAKTARRMALLAE Q           
Sbjct: 302  EVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDK 361

Query: 1175 XXXPVTKEEATAIKAAGKAWYQTMISDSDYTEFDNFTKW 1291
                + KEEA AIKAAGKAWYQTMISDSDYTEFDNF+KW
Sbjct: 362  KRAQIPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKW 400


>ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max]
          Length = 405

 Score =  656 bits (1693), Expect = 0.0
 Identities = 319/399 (79%), Positives = 350/399 (87%)
 Frame = +2

Query: 95   SAAARPLVTIQTLEGDMATDGGNTLPLPDVMKASIRPDIVNYVHSNIAKNRRQPYAVSRR 274
            +AAARPLVT+Q L+GDMATD   T+P+PDVMKASIRPDIVN+VHSNI+KN RQPYAVSRR
Sbjct: 2    AAAARPLVTVQALDGDMATDASATVPIPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRR 61

Query: 275  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRRWHRKINI 454
            AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWRRWHRKIN+
Sbjct: 62   AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 455  NQKRYXXXXXXXXXXXXXXXXXRGHRIENVPEIPLVVSDSAEGIEKTSAAIKALKEIGAY 634
            NQKRY                 RGHRIE+VPE+PLVVSDSAEG+EKT  AIK LK+IGA+
Sbjct: 122  NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAEGVEKTKEAIKVLKQIGAF 181

Query: 635  PDAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGTKIVKAFRNIPGVEIANVERLN 814
            PDAEKAKDS  IRPGKGKMRNRRY+S++GPL+VYGTEG K VKAFRN+PGVE+ANVERLN
Sbjct: 182  PDAEKAKDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLN 241

Query: 815  LLKLAPGGHLGRFIIWTKSAFEKLDSVYGSFEKASEKKKGYVLPRSKMVNADLSRIINSD 994
            LLKLAPGGHLGRF+IWTKSAFEKLDS+YGSF+K SEKKKGY+LPRSKMVN+DLSRIINSD
Sbjct: 242  LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINSD 301

Query: 995  EVQSVVRPIKKDVKRAPMKKNPLKNLNVMLKLNPYAKTARRMALLAEEQXXXXXXXXXXX 1174
            EVQSVVRPIKKDVKRA +KKNPLKNLN MLKLNPYAKTA+RMALLAE Q           
Sbjct: 302  EVQSVVRPIKKDVKRATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKVKKEKLDK 361

Query: 1175 XXXPVTKEEATAIKAAGKAWYQTMISDSDYTEFDNFTKW 1291
                V+KEEA+AIKAAGKAWY TM+SDSDYTEFDNF+KW
Sbjct: 362  KRKTVSKEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKW 400


>dbj|BAE71290.1| putative 60S ribosomal protein L1 [Trifolium pratense]
          Length = 406

 Score =  654 bits (1686), Expect = 0.0
 Identities = 321/401 (80%), Positives = 348/401 (86%)
 Frame = +2

Query: 89   MASAAARPLVTIQTLEGDMATDGGNTLPLPDVMKASIRPDIVNYVHSNIAKNRRQPYAVS 268
            MASAAARPLVT+QTL+ DMATD  NTLP+PDVM+ASIRPDIVN+VHSNI+KN RQPYAVS
Sbjct: 1    MASAAARPLVTVQTLDSDMATDSPNTLPIPDVMRASIRPDIVNFVHSNISKNARQPYAVS 60

Query: 269  RRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRRWHRKI 448
            RRAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQ AFGNMCRGGRMFAPTRIWRRWHRKI
Sbjct: 61   RRAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRRWHRKI 120

Query: 449  NINQKRYXXXXXXXXXXXXXXXXXRGHRIENVPEIPLVVSDSAEGIEKTSAAIKALKEIG 628
            N+NQKRY                 RGHRIE VPE PLVV DSAEG+EKT  AIK LK+IG
Sbjct: 121  NVNQKRYAVVSAIAASAVPSLVLARGHRIEAVPEFPLVVGDSAEGVEKTKEAIKVLKKIG 180

Query: 629  AYPDAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGTKIVKAFRNIPGVEIANVER 808
            A+PDAEKAKDS  IRPGKGKMRNRRY+S+KGPLIVYGT+G K VKAFRNIPGVEIANVER
Sbjct: 181  AFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEIANVER 240

Query: 809  LNLLKLAPGGHLGRFIIWTKSAFEKLDSVYGSFEKASEKKKGYVLPRSKMVNADLSRIIN 988
            LNLLKLAPGGHLGRF++WTKSAFEKLDS+YGSF+K SEKKKGYVLPR+KMVN+DL+RIIN
Sbjct: 241  LNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKGSEKKKGYVLPRAKMVNSDLTRIIN 300

Query: 989  SDEVQSVVRPIKKDVKRAPMKKNPLKNLNVMLKLNPYAKTARRMALLAEEQXXXXXXXXX 1168
            SDEVQSVVRP+KKDVKRA +KKNPLKNLNVML+LNPYAKTA+RMALLAE +         
Sbjct: 301  SDEVQSVVRPVKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKAKKEKL 360

Query: 1169 XXXXXPVTKEEATAIKAAGKAWYQTMISDSDYTEFDNFTKW 1291
                  VTKEEA+AIKAAGKAWY TMISDSDY EFDNF+KW
Sbjct: 361  DKKRKTVTKEEASAIKAAGKAWYNTMISDSDYAEFDNFSKW 401