BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001246
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267523.1| PREDICTED: 40S ribosomal protein S11 [Vitis ...   280   4e-73
ref|XP_002285422.1| PREDICTED: 40S ribosomal protein S11 [Vitis ...   279   7e-73
ref|XP_003629390.1| 40S ribosomal protein S11 [Medicago truncatu...   276   4e-72
ref|XP_003609505.1| 40S ribosomal protein S11 [Medicago truncatu...   275   7e-72
sp|Q9M5M1.1|RS11_EUPES RecName: Full=40S ribosomal protein S11 g...   274   2e-71

>ref|XP_002267523.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
           gi|296084564|emb|CBI25585.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  280 bits (715), Expect = 4e-73
 Identities = 136/160 (85%), Positives = 144/160 (90%)
 Frame = -1

Query: 757 MAEQTEKAFLKQPKVFICSXXXXXXXXXXXXGNRYYKSVGLGFKTPREATDGTYIDKKCP 578
           MAEQTEKAFLKQPKVF+CS            GNR++KS+GLGFKTPR+A +GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 577 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHVSPCFRVKE 398
           FTG VSIRGRILAGTCHSAKM+RTIIVRRNYLHYVKKYQRYEKRHSNIPAH SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHTSPCFRVKE 120

Query: 397 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGVKKAFTAI 278
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGG KKAFTA+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGGKKAFTAM 160


>ref|XP_002285422.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
           gi|296082102|emb|CBI21107.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  279 bits (713), Expect = 7e-73
 Identities = 135/160 (84%), Positives = 144/160 (90%)
 Frame = -1

Query: 757 MAEQTEKAFLKQPKVFICSXXXXXXXXXXXXGNRYYKSVGLGFKTPREATDGTYIDKKCP 578
           MAEQTEKAFLKQPKVF+CS            GNR++KS+GLGFKTPR+A +GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 577 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHVSPCFRVKE 398
           FTG VSIRGRILAGTCHSAKM+RTIIVRRNYLHYVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGGVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 397 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGVKKAFTAI 278
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGG KKAF A+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGGKKAFVAM 160


>ref|XP_003629390.1| 40S ribosomal protein S11 [Medicago truncatula]
           gi|217071062|gb|ACJ83891.1| unknown [Medicago
           truncatula] gi|355523412|gb|AET03866.1| 40S ribosomal
           protein S11 [Medicago truncatula]
           gi|388491240|gb|AFK33686.1| unknown [Medicago
           truncatula]
          Length = 160

 Score =  276 bits (706), Expect = 4e-72
 Identities = 135/160 (84%), Positives = 143/160 (89%)
 Frame = -1

Query: 757 MAEQTEKAFLKQPKVFICSXXXXXXXXXXXXGNRYYKSVGLGFKTPREATDGTYIDKKCP 578
           MAEQTEKAFLKQPKVF+CS            GNR++KSVGLGFKTPREAT+GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSVGLGFKTPREATEGTYIDKKCP 60

Query: 577 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHVSPCFRVKE 398
           FTG+VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 397 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGVKKAFTAI 278
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS G  KKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTGM 160


>ref|XP_003609505.1| 40S ribosomal protein S11 [Medicago truncatula]
           gi|217075074|gb|ACJ85897.1| unknown [Medicago
           truncatula] gi|355510560|gb|AES91702.1| 40S ribosomal
           protein S11 [Medicago truncatula]
           gi|388497962|gb|AFK37047.1| unknown [Medicago
           truncatula]
          Length = 160

 Score =  275 bits (704), Expect = 7e-72
 Identities = 134/160 (83%), Positives = 142/160 (88%)
 Frame = -1

Query: 757 MAEQTEKAFLKQPKVFICSXXXXXXXXXXXXGNRYYKSVGLGFKTPREATDGTYIDKKCP 578
           MAEQTEKAFLKQPKVF+CS            GNR++KSVGLGFKTPREA DGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCP 60

Query: 577 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHVSPCFRVKE 398
           FTG+VSIRGRILAGTCHSAKM RTI+VRRNYLH++KKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 397 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGVKKAFTAI 278
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS G  KKAFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTGM 160


>sp|Q9M5M1.1|RS11_EUPES RecName: Full=40S ribosomal protein S11
           gi|6984142|gb|AAF34771.1|AF227626_1 40S ribosomal
           protein S11 [Euphorbia esula]
          Length = 159

 Score =  274 bits (700), Expect = 2e-71
 Identities = 137/160 (85%), Positives = 143/160 (89%)
 Frame = -1

Query: 757 MAEQTEKAFLKQPKVFICSXXXXXXXXXXXXGNRYYKSVGLGFKTPREATDGTYIDKKCP 578
           MAEQTEKAFLKQPKVF+ S            GNR++KS+GLGFKTPREA DGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60

Query: 577 FTGDVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHVSPCFRVKE 398
           FTG VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 397 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGVKKAFTAI 278
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS GGVKKAFTAI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSS-GGVKKAFTAI 159