BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001212
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24313.3| unnamed protein product [Vitis vinifera]              180   9e-44
ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
ref|XP_002523226.1| pentatricopeptide repeat-containing protein,...   165   3e-39
ref|XP_002868306.1| pentatricopeptide repeat-containing protein ...   161   6e-38
ref|NP_193153.3| pentatricopeptide repeat-containing protein [Ar...   154   6e-36

>emb|CBI24313.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  180 bits (457), Expect = 9e-44
 Identities = 84/114 (73%), Positives = 99/114 (86%)
 Frame = +3

Query: 6   MKDYGVVAELKHYACMVDCLGKAGLIEEAEKFIEEMPVEPDGAVLGALLGGCRVHGNIEV 185
           MK+YGV  ELKHYACMVDCLG+AG++E+AE+FIEEMPVE DGAVLGALLGGCRVHGN EV
Sbjct: 290 MKEYGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGALLGGCRVHGNAEV 349

Query: 186 AERVAKKLLRLEPERGGYYVLLANIYAESGRYGDAEKIWDFMKRKNVSKVPGCS 347
            ERVAKKL+ LEPE+   YV+LANIYA +GR+ DAEK+   MK++ +SKVPGCS
Sbjct: 350 GERVAKKLMGLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSKVPGCS 403


>ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14170-like [Vitis vinifera]
          Length = 455

 Score =  180 bits (457), Expect = 9e-44
 Identities = 84/114 (73%), Positives = 99/114 (86%)
 Frame = +3

Query: 6   MKDYGVVAELKHYACMVDCLGKAGLIEEAEKFIEEMPVEPDGAVLGALLGGCRVHGNIEV 185
           MK+YGV  ELKHYACMVDCLG+AG++E+AE+FIEEMPVE DGAVLGALLGGCRVHGN EV
Sbjct: 338 MKEYGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGALLGGCRVHGNAEV 397

Query: 186 AERVAKKLLRLEPERGGYYVLLANIYAESGRYGDAEKIWDFMKRKNVSKVPGCS 347
            ERVAKKL+ LEPE+   YV+LANIYA +GR+ DAEK+   MK++ +SKVPGCS
Sbjct: 398 GERVAKKLMGLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSKVPGCS 451


>ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537522|gb|EEF39147.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 488

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/114 (65%), Positives = 97/114 (85%)
 Frame = +3

Query: 6   MKDYGVVAELKHYACMVDCLGKAGLIEEAEKFIEEMPVEPDGAVLGALLGGCRVHGNIEV 185
           M++YG+VAEL+HYA +VDCL +AG  EEAEKFI ++P+EPD AVLGA+L GCRVH N+EV
Sbjct: 367 MQNYGLVAELRHYATIVDCLARAGRFEEAEKFISDIPMEPDEAVLGAILAGCRVHNNVEV 426

Query: 186 AERVAKKLLRLEPERGGYYVLLANIYAESGRYGDAEKIWDFMKRKNVSKVPGCS 347
            ER+AK+L+RL+PE+ GYYVLLAN+YA  GR+ +AE + D M+ KN+SKVPGCS
Sbjct: 427 GERIAKRLIRLKPEKAGYYVLLANMYAGVGRFHEAEMVRDSMQEKNMSKVPGCS 480


>ref|XP_002868306.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314142|gb|EFH44565.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 458

 Score =  161 bits (407), Expect = 6e-38
 Identities = 71/116 (61%), Positives = 95/116 (81%)
 Frame = +3

Query: 6   MKDYGVVAELKHYACMVDCLGKAGLIEEAEKFIEEMPVEPDGAVLGALLGGCRVHGNIEV 185
           M++Y +V ELKHYA + DC+ +AGL+EEAEKF+E+MPVEPD AVLGA+L GC+V+GN+EV
Sbjct: 343 MQEYKIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVEPDEAVLGAVLSGCKVYGNVEV 402

Query: 186 AERVAKKLLRLEPERGGYYVLLANIYAESGRYGDAEKIWDFMKRKNVSKVPGCSQI 353
            ERVA+KL++LEP +G YYV LA +Y+ +GR+ +AE +   MK K +SKVPGCS I
Sbjct: 403 GERVARKLIQLEPRKGSYYVTLAGLYSAAGRFDEAESLRQLMKEKQISKVPGCSSI 458


>ref|NP_193153.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635637|sp|Q5XEY7.2|PP309_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14170 gi|332657989|gb|AEE83389.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 477

 Score =  154 bits (390), Expect = 6e-36
 Identities = 66/116 (56%), Positives = 95/116 (81%)
 Frame = +3

Query: 6   MKDYGVVAELKHYACMVDCLGKAGLIEEAEKFIEEMPVEPDGAVLGALLGGCRVHGNIEV 185
           M++Y +V ELKHYA + DC+ +AGL+EEAEKF+E+MPV+PD AV+GA+L GC+V+GN+EV
Sbjct: 362 MQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEV 421

Query: 186 AERVAKKLLRLEPERGGYYVLLANIYAESGRYGDAEKIWDFMKRKNVSKVPGCSQI 353
            ERVA++L++L+P +  YYV LA +Y+ +GR+ +AE +  +MK K +SKVPGCS I
Sbjct: 422 GERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477