BLASTX nr result

ID: Cimicifuga21_contig00001181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001181
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia es...   280   3e-73
ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus comm...   278   6e-73
gb|ADR71284.1| 40S ribosomal protein S16B [Hevea brasiliensis]        276   2e-72
ref|XP_002527855.1| ribosomal protein S9, putative [Ricinus comm...   276   4e-72
gb|AEW43294.1| putative ribosomal protein S9, partial [Hevea bra...   275   5e-72

>gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia esula]
          Length = 144

 Score =  280 bits (715), Expect = 3e-73
 Identities = 136/144 (94%), Positives = 141/144 (97%)
 Frame = -2

Query: 618 ATAPTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIELVEPEILRYKAYEPILLLGRHR 439
           A  PTESVQCFGRKKTAVAVTHCK+GRGLIKINGCPIELVEPEILR+KAYEPILLLGRHR
Sbjct: 1   AATPTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 438 FAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAYYQKYVDESAKKEIKDILVRYDRTLLVA 259
           FAGVDMRIRV+GGGHTSQIYAIRQSIAKALVAYYQK+VDE +KKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVA 120

Query: 258 DPRRCEPKKFGGRGARARFQKSYR 187
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144


>ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223542119|gb|EEF43663.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 151

 Score =  278 bits (712), Expect = 6e-73
 Identities = 138/147 (93%), Positives = 143/147 (97%), Gaps = 2/147 (1%)
 Frame = -2

Query: 621 MATAP--TESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIELVEPEILRYKAYEPILLLG 448
           +AT P  TESVQCFGRKKTAVAVTHCK+GRGLIKINGCPIELVEPEILR+KAYEPILLLG
Sbjct: 5   VATTPSQTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLG 64

Query: 447 RHRFAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAYYQKYVDESAKKEIKDILVRYDRTL 268
           RHRFAGVDMRIRV+GGGHTSQIYAIRQSIAKALVAYYQKYVDE +KKEIKDILVRYDRTL
Sbjct: 65  RHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTL 124

Query: 267 LVADPRRCEPKKFGGRGARARFQKSYR 187
           LVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 125 LVADPRRCEPKKFGGRGARARFQKSYR 151


>gb|ADR71284.1| 40S ribosomal protein S16B [Hevea brasiliensis]
          Length = 146

 Score =  276 bits (707), Expect = 2e-72
 Identities = 134/144 (93%), Positives = 142/144 (98%)
 Frame = -2

Query: 618 ATAPTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIELVEPEILRYKAYEPILLLGRHR 439
           A+AP ESVQCFGRKKTAVAVT+CK+GRGLIKINGCPIELVEPEILR+KAYEPILLLGRHR
Sbjct: 3   ASAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 62

Query: 438 FAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAYYQKYVDESAKKEIKDILVRYDRTLLVA 259
           FAGVDMRIRV+GGGHTSQIYAIRQSIAKALVA+YQKYVDE +KKEIKD+LVRYDRTLLVA
Sbjct: 63  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDVLVRYDRTLLVA 122

Query: 258 DPRRCEPKKFGGRGARARFQKSYR 187
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 123 DPRRCEPKKFGGRGARARFQKSYR 146


>ref|XP_002527855.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223532779|gb|EEF34558.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 152

 Score =  276 bits (705), Expect = 4e-72
 Identities = 135/144 (93%), Positives = 140/144 (97%)
 Frame = -2

Query: 618 ATAPTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIELVEPEILRYKAYEPILLLGRHR 439
           A A TESVQCFGRKKTAVAVTHCK+GRGLIKINGCPIELVEPEILR+KAYEPILLLGRHR
Sbjct: 9   AAATTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 68

Query: 438 FAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAYYQKYVDESAKKEIKDILVRYDRTLLVA 259
           FA VDMRIRV+GGGHTSQIYAIRQSIAKALVAYYQK+VDE +KKEIKDILVRYDRTLLVA
Sbjct: 69  FAAVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVA 128

Query: 258 DPRRCEPKKFGGRGARARFQKSYR 187
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 129 DPRRCEPKKFGGRGARARFQKSYR 152


>gb|AEW43294.1| putative ribosomal protein S9, partial [Hevea brasiliensis]
          Length = 143

 Score =  275 bits (704), Expect = 5e-72
 Identities = 134/143 (93%), Positives = 141/143 (98%)
 Frame = -2

Query: 615 TAPTESVQCFGRKKTAVAVTHCKKGRGLIKINGCPIELVEPEILRYKAYEPILLLGRHRF 436
           +AP ESVQCFGRKKTAVAVT+CK+GRGLIKINGCPIELVEPEILR+KAYEPILLLGRHRF
Sbjct: 1   SAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 60

Query: 435 AGVDMRIRVRGGGHTSQIYAIRQSIAKALVAYYQKYVDESAKKEIKDILVRYDRTLLVAD 256
           AGVDMRIRV+GGGHTSQIYAIRQSIAKALVA+YQKYVDE +KKEIKDILVRYDRTLLVAD
Sbjct: 61  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 120

Query: 255 PRRCEPKKFGGRGARARFQKSYR 187
           PRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 PRRCEPKKFGGRGARARFQKSYR 143


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