BLASTX nr result

ID: Cimicifuga21_contig00001166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001166
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285554.1| PREDICTED: mitochondrial import inner membra...   187   5e-45
emb|CAN70489.1| hypothetical protein VITISV_008665 [Vitis vinifera]   187   5e-45
ref|XP_002319066.1| predicted protein [Populus trichocarpa] gi|2...   183   8e-44
gb|ABK23235.1| unknown [Picea sitchensis]                             179   8e-43
ref|XP_002328505.1| predicted protein [Populus trichocarpa] gi|2...   178   2e-42

>ref|XP_002285554.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23 [Vitis vinifera] gi|296082145|emb|CBI21150.3|
           unnamed protein product [Vitis vinifera]
          Length = 182

 Score =  187 bits (474), Expect = 5e-45
 Identities = 87/127 (68%), Positives = 106/127 (83%)
 Frame = -2

Query: 809 LYDLPTSPQYLFDEEAAAQRRSWSENLQFYTGCSYLTGAIAGGTKGTLEGLMAAERGDSL 630
           LY+LPTSP+YLFDEE+  QRRSWSENLQ+YTG  YL+GAI GG KG++EG+ AAE GD+L
Sbjct: 28  LYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTL 87

Query: 629 KLRATRVLNSGGHTGRRFGNSLGVLGVMYGALESGIAHYAGTDDTVTTFCAGLGTGALYK 450
           KLR  RVLNSGG TGRRFGNS+GVLG+++  LESG+ H+  TDD + +  AGLGTGALY+
Sbjct: 88  KLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYR 147

Query: 449 VASGPRS 429
            A+GPRS
Sbjct: 148 AAAGPRS 154


>emb|CAN70489.1| hypothetical protein VITISV_008665 [Vitis vinifera]
          Length = 450

 Score =  187 bits (474), Expect = 5e-45
 Identities = 87/127 (68%), Positives = 106/127 (83%)
 Frame = -2

Query: 809 LYDLPTSPQYLFDEEAAAQRRSWSENLQFYTGCSYLTGAIAGGTKGTLEGLMAAERGDSL 630
           LY+LPTSP+YLFDEE+  QRRSWSENLQ+YTG  YL+GAI GG KG++EG+ AAE GD+L
Sbjct: 28  LYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTL 87

Query: 629 KLRATRVLNSGGHTGRRFGNSLGVLGVMYGALESGIAHYAGTDDTVTTFCAGLGTGALYK 450
           KLR  RVLNSGG TGRRFGNS+GVLG+++  LESG+ H+  TDD + +  AGLGTGALY+
Sbjct: 88  KLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYR 147

Query: 449 VASGPRS 429
            A+GPRS
Sbjct: 148 AAAGPRS 154


>ref|XP_002319066.1| predicted protein [Populus trichocarpa] gi|222857442|gb|EEE94989.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  183 bits (464), Expect = 8e-44
 Identities = 84/127 (66%), Positives = 103/127 (81%)
 Frame = -2

Query: 809 LYDLPTSPQYLFDEEAAAQRRSWSENLQFYTGCSYLTGAIAGGTKGTLEGLMAAERGDSL 630
           LY+LPTSP++LF EE+  QRRSWSENLQ+YTG  YL+GAI GG KG++EG+ AAE G+SL
Sbjct: 26  LYNLPTSPEFLFHEESLTQRRSWSENLQYYTGTGYLSGAILGGAKGSIEGIRAAEPGESL 85

Query: 629 KLRATRVLNSGGHTGRRFGNSLGVLGVMYGALESGIAHYAGTDDTVTTFCAGLGTGALYK 450
           KLR  RVLNSGGH GR+FGN+LGVLG+M+  +ESG+ H+  TDD V T  AGL TGA+Y+
Sbjct: 86  KLRVNRVLNSGGHAGRKFGNNLGVLGLMFAGIESGLIHWRDTDDLVNTVLAGLSTGAIYR 145

Query: 449 VASGPRS 429
            A GPRS
Sbjct: 146 AAKGPRS 152


>gb|ABK23235.1| unknown [Picea sitchensis]
          Length = 189

 Score =  179 bits (455), Expect = 8e-43
 Identities = 88/158 (55%), Positives = 107/158 (67%)
 Frame = -2

Query: 809 LYDLPTSPQYLFDEEAAAQRRSWSENLQFYTGCSYLTGAIAGGTKGTLEGLMAAERGDSL 630
           +Y +PTSP++LF EEAA QRRSW EN+ +YTGC YL GA++G + G +EGL A E GDS+
Sbjct: 35  IYQIPTSPEFLFQEEAAVQRRSWGENITYYTGCGYLLGAVSGASVGLVEGLKAREPGDSM 94

Query: 629 KLRATRVLNSGGHTGRRFGNSLGVLGVMYGALESGIAHYAGTDDTVTTFCAGLGTGALYK 450
           KLR  RVLN+ GHTGR+FGN LGV+G++Y  LESGI    GTDD + + CAGLGTGALYK
Sbjct: 95  KLRVNRVLNASGHTGRKFGNRLGVIGLLYAGLESGIVAGRGTDDILNSVCAGLGTGALYK 154

Query: 449 VASGPRSXXXXXXXXXXXXXXXXXXXXXVLPALKRYVP 336
            A+GPRS                        ALKRYVP
Sbjct: 155 AAAGPRSAAVAGAIGGLAVGALVAGK----QALKRYVP 188


>ref|XP_002328505.1| predicted protein [Populus trichocarpa] gi|222838220|gb|EEE76585.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  178 bits (452), Expect = 2e-42
 Identities = 83/127 (65%), Positives = 101/127 (79%)
 Frame = -2

Query: 809 LYDLPTSPQYLFDEEAAAQRRSWSENLQFYTGCSYLTGAIAGGTKGTLEGLMAAERGDSL 630
           LY LPTSP++LF EE+  QRRSWSE+LQ+YTG  YL GAI GG KG++EG+ AAE G++L
Sbjct: 26  LYKLPTSPEFLFHEESLHQRRSWSESLQYYTGTGYLAGAILGGAKGSVEGIRAAEPGETL 85

Query: 629 KLRATRVLNSGGHTGRRFGNSLGVLGVMYGALESGIAHYAGTDDTVTTFCAGLGTGALYK 450
           KLR  RVLNSGGH GRRFGN+LGVLG+M+  +ESG+ H+  TDD V T  AGL TGA+Y+
Sbjct: 86  KLRVNRVLNSGGHMGRRFGNNLGVLGLMFAGIESGLIHWRDTDDLVNTVLAGLSTGAIYR 145

Query: 449 VASGPRS 429
            A GPRS
Sbjct: 146 AAKGPRS 152


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