BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001146
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   464   e-130
gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I p...   462   e-130
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   461   e-129
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   461   e-129
gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein ...   460   e-129

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  464 bits (1195), Expect(2) = e-130
 Identities = 225/242 (92%), Positives = 234/242 (96%), Gaps = 1/242 (0%)
 Frame = +3

Query: 141 GTAVKVAPSTSELLGEGRITMRKTGSKPKTVSS-SPWYGPDRVKYLGPFSGESPSYLTGE 317
           G A+K+APS+S+LLGEGR+TMRKT  +PK VSS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 318 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 497
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 498 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGG 677
           AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPGG
Sbjct: 135 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGG 194

Query: 678 SFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 857
           SFDPL LA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 858 NA 863
           NA
Sbjct: 255 NA 256



 Score = 29.6 bits (65), Expect(2) = e-130
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 958 AWAFATNFVPGK 993
           AWA+ATNFVPGK
Sbjct: 256 AWAYATNFVPGK 267


>gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
           ginseng]
          Length = 266

 Score =  462 bits (1189), Expect(2) = e-130
 Identities = 225/241 (93%), Positives = 230/241 (95%)
 Frame = +3

Query: 141 GTAVKVAPSTSELLGEGRITMRKTGSKPKTVSSSPWYGPDRVKYLGPFSGESPSYLTGEF 320
           G AVKVAPS+SEL G GRI+MRKTG KP   S SPWYGPDRVKYLGPFSGE+PSYLTGEF
Sbjct: 15  GMAVKVAPSSSELFGSGRISMRKTGKKPAASSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 321 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 500
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134

Query: 501 GAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGGS 680
           G+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV DPLYPGGS
Sbjct: 135 GSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGS 194

Query: 681 FDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 860
           FDPL LAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD LADPVNNN
Sbjct: 195 FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADPLADPVNNN 254

Query: 861 A 863
           A
Sbjct: 255 A 255



 Score = 29.6 bits (65), Expect(2) = e-130
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 958 AWAFATNFVPGK 993
           AWA+ATNFVPGK
Sbjct: 255 AWAYATNFVPGK 266


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  461 bits (1185), Expect(2) = e-129
 Identities = 223/242 (92%), Positives = 232/242 (95%), Gaps = 1/242 (0%)
 Frame = +3

Query: 141 GTAVKVAPSTSELLGEGRITMRKTGSKPKTVSS-SPWYGPDRVKYLGPFSGESPSYLTGE 317
           G AVK++P+ S+LLGEGRITMRKT  KPK VSS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 318 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 497
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 134

Query: 498 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGG 677
           AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGG 194

Query: 678 SFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 857
           SFDPL LA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 858 NA 863
           NA
Sbjct: 255 NA 256



 Score = 29.6 bits (65), Expect(2) = e-129
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 958 AWAFATNFVPGK 993
           AWA+ATNFVPGK
Sbjct: 256 AWAYATNFVPGK 267


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  461 bits (1187), Expect(2) = e-129
 Identities = 224/242 (92%), Positives = 232/242 (95%), Gaps = 1/242 (0%)
 Frame = +3

Query: 141 GTAVKVAPSTSELLGEGRITMRKTGSKPKTV-SSSPWYGPDRVKYLGPFSGESPSYLTGE 317
           G AVK+ P+ SE++GEGRITMRKT  KPKTV SSSPWYGPDRVKYLGPFSGESPSYLTGE
Sbjct: 15  GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 318 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 497
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 498 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGG 677
           AG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEV DPLYPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 678 SFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 857
           SFDPL LA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 858 NA 863
           NA
Sbjct: 255 NA 256



 Score = 28.5 bits (62), Expect(2) = e-129
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1

Query: 958 AWAFATNFVPGK 993
           AW FATNFVPGK
Sbjct: 256 AWNFATNFVPGK 267


>gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
          Length = 267

 Score =  460 bits (1183), Expect(2) = e-129
 Identities = 224/242 (92%), Positives = 231/242 (95%), Gaps = 1/242 (0%)
 Frame = +3

Query: 141 GTAVKVAPSTSELLGEGRITMRKTGSKPKTVSS-SPWYGPDRVKYLGPFSGESPSYLTGE 317
           G AVK+  S S ++GEGRITMRKT SK K VSS SPWYGPDRVKYLGPFSGE+PSYLTGE
Sbjct: 15  GQAVKLGSSVSNIVGEGRITMRKTASKSKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 318 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 497
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 134

Query: 498 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGG 677
           AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+ DPLYPGG
Sbjct: 135 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEITDPLYPGG 194

Query: 678 SFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 857
           SFDPL LAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 195 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 254

Query: 858 NA 863
           NA
Sbjct: 255 NA 256



 Score = 28.5 bits (62), Expect(2) = e-129
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +1

Query: 958 AWAFATNFVPGK 993
           AW++ATNFVPGK
Sbjct: 256 AWSYATNFVPGK 267