BLASTX nr result

ID: Cimicifuga21_contig00001126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001126
         (1982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   723   0.0  
ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   723   0.0  
emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]   718   0.0  
ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   706   0.0  
ref|XP_003535671.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   705   0.0  

>ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
            sativus]
          Length = 550

 Score =  723 bits (1867), Expect = 0.0
 Identities = 352/411 (85%), Positives = 379/411 (92%), Gaps = 4/411 (0%)
 Frame = +3

Query: 444  VDIRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLE 623
            V++R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLE
Sbjct: 96   VEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLE 155

Query: 624  AGHHVYINLQTEKVYCLPDGYEISDPSLDDIRHVLYPRFSREQVVQLDKNKQWSRALDGS 803
            AGHHVYINL+TEKVYCLPDGYEI+DPSLDDIR+VL PRF++EQV QLDKNKQWSRALDGS
Sbjct: 156  AGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGS 215

Query: 804  DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQNSKSPLVHRFGELTRKIW 983
            DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP NYQ+ +SPLVHRFGELTRKIW
Sbjct: 216  DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIW 275

Query: 984  HAKNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRSSKKNGSIIH 1163
            HA+NFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSW LNTLH++LR +KK+ SII+
Sbjct: 276  HARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIY 335

Query: 1164 KCFQGELEVVKEIHNKFSIEKKDN----DAGTESNNVSLETSRMHFXXXXXXXXXXXXFK 1331
            +CFQGELEVVKEIH+K  IEKK+N    DAGTE ++V++ETSRM F            FK
Sbjct: 336  ECFQGELEVVKEIHSKALIEKKENGEEQDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFK 395

Query: 1332 DAMEKNIIPQVPLFNILKKFDGEYVTEVVRPCIARMRYRVTKLPQYLILHMRRFTKNNFF 1511
            D MEKNIIPQVPLFNILKKFDGE +TEVVRP IARMRYRVT+LPQYLILHMRRFTKNNFF
Sbjct: 396  DVMEKNIIPQVPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFF 455

Query: 1512 VEKNPTLVNFPVKNLELKDYIPLPTPKEKDKLRSKYDLIANIVHDGKPGEG 1664
            VEKNPTLVNFPVKNLELKDYIPLPTPK+ DKLRSKYDLIANIVHDGKP EG
Sbjct: 456  VEKNPTLVNFPVKNLELKDYIPLPTPKDNDKLRSKYDLIANIVHDGKPNEG 506


>ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
            sativus]
          Length = 550

 Score =  723 bits (1866), Expect = 0.0
 Identities = 351/411 (85%), Positives = 379/411 (92%), Gaps = 4/411 (0%)
 Frame = +3

Query: 444  VDIRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLE 623
            V++R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSLE
Sbjct: 96   VEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLE 155

Query: 624  AGHHVYINLQTEKVYCLPDGYEISDPSLDDIRHVLYPRFSREQVVQLDKNKQWSRALDGS 803
            AGHHVYINL+TEKVYCLPDGYEI+DPSLDDIR+VL PRF++EQV QLDKNKQWSRALDGS
Sbjct: 156  AGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGS 215

Query: 804  DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQNSKSPLVHRFGELTRKIW 983
            DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIP NYQ+ +SPLVHRFGELTRKIW
Sbjct: 216  DYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIW 275

Query: 984  HAKNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRSSKKNGSIIH 1163
            HA+NFKGQVSPHEFLQA+MKASKKRFRIGAQSDPVEFMSW LNTLH++LR +KK+ SII+
Sbjct: 276  HARNFKGQVSPHEFLQAIMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIY 335

Query: 1164 KCFQGELEVVKEIHNKFSIEKKDN----DAGTESNNVSLETSRMHFXXXXXXXXXXXXFK 1331
            +CFQGELEVVKEIH+K  IEKK+N    DAGTE ++V++ETSRM F            FK
Sbjct: 336  ECFQGELEVVKEIHSKALIEKKENGEEQDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFK 395

Query: 1332 DAMEKNIIPQVPLFNILKKFDGEYVTEVVRPCIARMRYRVTKLPQYLILHMRRFTKNNFF 1511
            D MEKNIIPQVPLFNILKKFDGE +TEVVRP IARMRYRVT+LPQYLILHMRRFTKNNFF
Sbjct: 396  DVMEKNIIPQVPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFF 455

Query: 1512 VEKNPTLVNFPVKNLELKDYIPLPTPKEKDKLRSKYDLIANIVHDGKPGEG 1664
            VEKNPTLVNFPVKNLELKDYIPLPTPK+ DKLRSKYDLIANIVHDGKP EG
Sbjct: 456  VEKNPTLVNFPVKNLELKDYIPLPTPKDNDKLRSKYDLIANIVHDGKPNEG 506


>emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]
          Length = 566

 Score =  718 bits (1853), Expect = 0.0
 Identities = 374/502 (74%), Positives = 396/502 (78%), Gaps = 11/502 (2%)
 Frame = +3

Query: 192  KRLKLLHESSPS-SHLAIDNSLLPLASYAXXXXXXXXXXXXXXXXXXXXQG--RIEANGQ 362
            KR K L ESSP  + LA +N+L  LASY                     +   R E NG 
Sbjct: 21   KRQKKLDESSPPPASLAFENALHTLASYDDDDDEKEEEEMKEASGLRGREDNRRAERNGH 80

Query: 363  IKXXXXXXXXXXXYXXXXXXXXXXXXQ-VDIRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 539
                                      + V++RRDCPYLDTVNRQVLDFDFEKFCSVSLSN
Sbjct: 81   RDGEEYDDDDDDDDDPHQEANQVKRSRLVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSN 140

Query: 540  LNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLQTEKVYCLPDGYEISDPSLDDIR 719
            LNVYACLVCGKYYQGRG+KSHAYTHSLEAGHHVYINL+TEKVYCLPDGYEI+DPSLDDIR
Sbjct: 141  LNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIR 200

Query: 720  HVLYPRFSREQVVQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLR 899
            HVL PRF+REQV QLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLR
Sbjct: 201  HVLNPRFTREQVDQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLR 260

Query: 900  NFFLIPENYQNSKSPLVHRFGELTRKIWHAKNFKGQVSPHEFLQAVMKASKKRFRIGAQS 1079
            NFFLIPENY++ KSPLVHRFGELTRKIWHA+NFKGQVSPHEFLQAVMKASKKRFRIGAQS
Sbjct: 261  NFFLIPENYRHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQS 320

Query: 1080 DPVEFMSWLLNTLHADLRSSKKNGSIIHKCFQGELEVVKEIHNKFSIEKKDN-------D 1238
            DPVEFMSWLLNTLH DLR+SKKN SII+ CFQGELEVVKEI NK   EK++N        
Sbjct: 321  DPVEFMSWLLNTLHGDLRTSKKNSSIIYNCFQGELEVVKEIPNKGFFEKRENGDDQNKAT 380

Query: 1239 AGTESNNVSLETSRMHFXXXXXXXXXXXXFKDAMEKNIIPQVPLFNILKKFDGEYVTEVV 1418
               E  +V LET RM F            FKD MEKNIIPQVPLFNILKKFDGE VTEVV
Sbjct: 381  TADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGELVTEVV 440

Query: 1419 RPCIARMRYRVTKLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEK 1598
            RP IARMRYRVT+LPQYLILHMRRFTKNNFF+EKNPTLVNFPVKNLELKDYIPLP PKE 
Sbjct: 441  RPRIARMRYRVTRLPQYLILHMRRFTKNNFFIEKNPTLVNFPVKNLELKDYIPLPAPKEN 500

Query: 1599 DKLRSKYDLIANIVHDGKPGEG 1664
            +KLRSKYDLIANIVHDGKPGEG
Sbjct: 501  EKLRSKYDLIANIVHDGKPGEG 522


>ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max]
          Length = 563

 Score =  706 bits (1823), Expect = 0.0
 Identities = 346/414 (83%), Positives = 375/414 (90%), Gaps = 6/414 (1%)
 Frame = +3

Query: 441  QVDIRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSL 620
            QV++R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSL
Sbjct: 106  QVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSL 165

Query: 621  EAGHHVYINLQTEKVYCLPDGYEISDPSLDDIRHVLYPRFSREQVVQLDKNKQWSRALDG 800
            EAGHHVYINL+TEKVYCLPDGYEI+DPSLDDIR+VL PRF+ ++V QLDKNKQWSRALDG
Sbjct: 166  EAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRNVLNPRFAAKEVEQLDKNKQWSRALDG 225

Query: 801  SDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQNSKSPLVHRFGELTRKI 980
            S YLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQ+ KSPLVHRFGELTRKI
Sbjct: 226  SSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKI 285

Query: 981  WHAKNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRSSKKNGSII 1160
            WH +NFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADL++SKKN SII
Sbjct: 286  WHTRNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNTSII 345

Query: 1161 HKCFQGELEVVKEIHNKFSIEKKDNDAGTESNNVS------LETSRMHFXXXXXXXXXXX 1322
            ++CFQGELEVVKEI NK   +KK+N+A   S+ V+       ETS+M F           
Sbjct: 346  YECFQGELEVVKEIPNKVISDKKENNAEKLSDGVNERYAFVKETSKMPFLMLGLDLPPPP 405

Query: 1323 XFKDAMEKNIIPQVPLFNILKKFDGEYVTEVVRPCIARMRYRVTKLPQYLILHMRRFTKN 1502
             FKD MEKNIIPQVPLFNILKKFDGE VTEVVRP IARM+YRVT+LP+Y+ILHMRRFTKN
Sbjct: 406  LFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMILHMRRFTKN 465

Query: 1503 NFFVEKNPTLVNFPVKNLELKDYIPLPTPKEKDKLRSKYDLIANIVHDGKPGEG 1664
            NFFVEKNPTLVNFPVKNLELKDYIPLPTPKE +KLR+KYDLIAN+VHDGKPGEG
Sbjct: 466  NFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRTKYDLIANVVHDGKPGEG 519


>ref|XP_003535671.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max]
          Length = 569

 Score =  705 bits (1820), Expect = 0.0
 Identities = 347/419 (82%), Positives = 372/419 (88%), Gaps = 11/419 (2%)
 Frame = +3

Query: 441  QVDIRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSL 620
            QV++R+DCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRG+KSHAYTHSL
Sbjct: 107  QVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSL 166

Query: 621  EAGHHVYINLQTEKVYCLPDGYEISDPSLDDIRHVLYPRFSREQVVQLDKNKQWSRALDG 800
            EAGHHVYINL+TEKVYCLPDGYEI+DPSLDDIRHVL PRF+ ++V QLDKNKQWSRALDG
Sbjct: 167  EAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRHVLNPRFTAKEVEQLDKNKQWSRALDG 226

Query: 801  SDYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQNSKSPLVHRFGELTRKI 980
            S YLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQ+ KSPLVHRFGELTRKI
Sbjct: 227  SSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKI 286

Query: 981  WHAKNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRSSKKNGSII 1160
            WHA+NFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADL++SKKN SII
Sbjct: 287  WHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNTSII 346

Query: 1161 HKCFQGELEVVKEIHNKFSIEKKDN-----------DAGTESNNVSLETSRMHFXXXXXX 1307
            ++CFQGELEVVKEI NK   +KK+N           D   E      ETS+M F      
Sbjct: 347  YECFQGELEVVKEIPNKVISDKKENSENQNNAEKLSDGVNERYAFVKETSKMPFLMLGLD 406

Query: 1308 XXXXXXFKDAMEKNIIPQVPLFNILKKFDGEYVTEVVRPCIARMRYRVTKLPQYLILHMR 1487
                  FKD MEKNIIPQVPLFNILKKFDGE VTEVVRP IARM+YRVT+LP+Y+ILHMR
Sbjct: 407  LPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMILHMR 466

Query: 1488 RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKEKDKLRSKYDLIANIVHDGKPGEG 1664
            RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKE +KLR+KYDLIAN+VHDGKPGEG
Sbjct: 467  RFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRTKYDLIANVVHDGKPGEG 525


Top