BLASTX nr result

ID: Cimicifuga21_contig00001107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001107
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283181.1| PREDICTED: uncharacterized protein LOC100265...   155   3e-35
emb|CBI20469.3| unnamed protein product [Vitis vinifera]              150   1e-33
gb|AFX67022.1| hypothetical protein [Solanum tuberosum]               147   6e-33
gb|ABK93511.1| unknown [Populus trichocarpa]                          140   1e-30
ref|XP_002319263.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30

>ref|XP_002283181.1| PREDICTED: uncharacterized protein LOC100265933 [Vitis vinifera]
          Length = 339

 Score =  155 bits (391), Expect = 3e-35
 Identities = 123/327 (37%), Positives = 169/327 (51%), Gaps = 42/327 (12%)
 Frame = +2

Query: 200  KVATYGIGAAGLRNATASFPKEQSLVPT-RKGTKPIXXXXXXXXXXXXXXXPVLVHRPSW 376
            KVA  G+  AGLR A A  P EQ +    RK T P+               PV V RPSW
Sbjct: 11   KVAGVGVVNAGLRGAPAVQPVEQPMAAAARKATVPVSSVISSAKLGDA---PVSVQRPSW 67

Query: 377  --DDWEFAGDEEEFLLDSVQPMPRVVFGGVPSLEEATEATSDLKQALEKEYFLNDFGGKK 550
              DDWEFA  EEE  + + +P+PRVVFGGVP+L+EA EATS+LK AL++ Y       + 
Sbjct: 68   ELDDWEFASVEEEINIGTGEPLPRVVFGGVPTLQEAKEATSELKDALDQLYLSPSRSIR- 126

Query: 551  SSTVQESTLLSSGDS---ETKACI-TSESAVIHSSVPKPVFQAFSLLKESPEAQGVVASL 718
             S VQ+  LL   +S   ETKAC+ T+E+ V  ++VP    QAF+ LK+SP AQ VVAS+
Sbjct: 127  -SGVQQLGLLQIANSDHLETKACVATTENTV--ATVPAHAIQAFAYLKDSPAAQNVVASI 183

Query: 719  ASDKNVWDAVMKNAKVMEFIKNQQ----------NSDSSDIDTNINH---PFPVDETGKE 859
            ASD NVW AVM+N  ++EF++ Q+          N++ S  DT       P   +++  E
Sbjct: 184  ASDPNVWSAVMQNEALVEFLQAQKTCAPYPSMGLNAEESVADTGFQDQEAPKSFEDSSDE 243

Query: 860  ESYS------------ETSENAGNE------FMEFVEKVKIKVTDIISSLSGFFQSMFGG 985
                            E S +AG+       F   +E +K+ + +I+ ++       FG 
Sbjct: 244  GDSGSRFQNKETPKSFEDSSDAGDSGSLSSWFASLLETMKLSLAEIVGNI-------FGR 296

Query: 986  P-VDEKISIDEN---GNAAVKTGVGAS 1054
            P  D K S D N       +  G+GAS
Sbjct: 297  PAADVKSSPDSNEKPEGQVMNMGLGAS 323


>emb|CBI20469.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  150 bits (378), Expect = 1e-33
 Identities = 97/204 (47%), Positives = 126/204 (61%), Gaps = 7/204 (3%)
 Frame = +2

Query: 200 KVATYGIGAAGLRNATASFPKEQSLVPT-RKGTKPIXXXXXXXXXXXXXXXPVLVHRPSW 376
           KVA  G+  AGLR A A  P EQ +    RK T P+               PV V RPSW
Sbjct: 57  KVAGVGVVNAGLRGAPAVQPVEQPMAAAARKATVPVSSVISSAKLGDA---PVSVQRPSW 113

Query: 377 --DDWEFAGDEEEFLLDSVQPMPRVVFGGVPSLEEATEATSDLKQALEKEYFLNDFGGKK 550
             DDWEFA  EEE  + + +P+PRVVFGGVP+L+EA EATS+LK AL++ Y       + 
Sbjct: 114 ELDDWEFASVEEEINIGTGEPLPRVVFGGVPTLQEAKEATSELKDALDQLYLSPSRSIR- 172

Query: 551 SSTVQESTLLSSGDS---ETKACI-TSESAVIHSSVPKPVFQAFSLLKESPEAQGVVASL 718
            S VQ+  LL   +S   ETKAC+ T+E+ V  ++VP    QAF+ LK+SP AQ VVAS+
Sbjct: 173 -SGVQQLGLLQIANSDHLETKACVATTENTV--ATVPAHAIQAFAYLKDSPAAQNVVASI 229

Query: 719 ASDKNVWDAVMKNAKVMEFIKNQQ 790
           ASD NVW AVM+N  ++EF++ Q+
Sbjct: 230 ASDPNVWSAVMQNEALVEFLQAQK 253


>gb|AFX67022.1| hypothetical protein [Solanum tuberosum]
          Length = 324

 Score =  147 bits (371), Expect = 6e-33
 Identities = 90/238 (37%), Positives = 134/238 (56%), Gaps = 15/238 (6%)
 Frame = +2

Query: 374  WDDWEFAGDEEEFLLDSVQPMPRVVFGGVPSLEEATEATSDLKQALEKEYFLNDFGGKKS 553
            +DDWE AG EEE +++  +P+PR+VFGG PSL+EATEATSDLK AL   Y      G   
Sbjct: 80   FDDWEMAGGEEEMMVNPGEPLPRLVFGGAPSLQEATEATSDLKDAL--VYMSGSANGYGG 137

Query: 554  STVQESTLLSSGDSETKACITSESAVIHSSVPKPVFQAFSLLKESPEAQGVVASLASDKN 733
            S +      S     +KAC+ SE+ ++  SVPK   QA+ +L E P AQ VVAS+A D N
Sbjct: 138  SCISG----SCSSPVSKACVVSET-IVTKSVPKHAVQAYRILSEIPAAQNVVASIACDPN 192

Query: 734  VWDAVMKNAKVMEFIKNQQNSD--------SSDIDTNINHPFPVDETGKEESYSET---S 880
            VW+AV++N  + +F+++Q+ S+          + D ++       E+   + +SE+    
Sbjct: 193  VWNAVLQNPALQDFLESQRYSEKCASFPDSDQEKDESVADTASFSESSPWKPFSESKAEE 252

Query: 881  ENAGNEFMEFVEKVKIKVT----DIISSLSGFFQSMFGGPVDEKISIDENGNAAVKTG 1042
              +GN F  F++ V   VT     ++ SLS FF ++FGG    K  +D +G+A    G
Sbjct: 253  SKSGNSFTSFLQNVTQTVTQTVVSMMDSLSDFFNNLFGG---NKFFVDADGSAKFGAG 307


>gb|ABK93511.1| unknown [Populus trichocarpa]
          Length = 325

 Score =  140 bits (352), Expect = 1e-30
 Identities = 105/304 (34%), Positives = 160/304 (52%), Gaps = 19/304 (6%)
 Frame = +2

Query: 200  KVATYGIGAAGLRNATASFPK--EQSLVPTRKGTKPIXXXXXXXXXXXXXXXPVLVHRPS 373
            KVA  G+  +G+R   +  P   EQS+   R  ++P+                  V RPS
Sbjct: 12   KVAGIGVVNSGIRGGISCVPPSVEQSV---RNASRPVSAIISSTPSGGEVA--ATVQRPS 66

Query: 374  W--DDWEFAGD-EEEFLLDSVQPMPRVVFGGVP-SLEEATEATSDLKQALEKEYFLNDFG 541
            W  D+WEFAG  EEE ++ S +P+ RVVFGG P SL+EA  AT +L  A +K Y  +   
Sbjct: 67   WELDEWEFAGGLEEETVVHSAEPVARVVFGGAPPSLQEAEAATFELNDAFQKVYLSSPNS 126

Query: 542  GKKSST----VQESTLLSSGDS-ETKACITSESAVIHSSVPKPVFQAFSLLKESPEAQGV 706
            G  SS     +    LL   +S ETK CI  +     + VPK   QAFSLL ESP+ Q V
Sbjct: 127  GTGSSVGGSQLSGLPLLRKSESLETKDCIPCDPT--GAPVPKYAMQAFSLLNESPKIQTV 184

Query: 707  VASLASDKNVWDAVMKNAKVMEFIKNQ----QNSDSSDIDTNINHPFPVDETGKEESYSE 874
            VA++ASD NVW+AV +N  + +F+++Q    Q+S++ +   + +    V      E   +
Sbjct: 185  VAAVASDPNVWNAVWENEALQDFLQSQNTYTQSSEAKEFVRDTDFQDAVSSKNLAELSDD 244

Query: 875  TSE--NAGNEFMEFVEKVKIKVTDIISSLSGFFQSMFGGPVDE--KISIDENGNAAVKTG 1042
             SE  ++  E ++ +  VK+ V D++++LS +FQ +F     E    + +  G A ++  
Sbjct: 245  ESEAGSSQTELVDIINNVKLTVVDLVTNLSAYFQKIFSFSSAEHTPAANESAGAATIEKT 304

Query: 1043 VGAS 1054
            +GAS
Sbjct: 305  IGAS 308


>ref|XP_002319263.1| predicted protein [Populus trichocarpa] gi|222857639|gb|EEE95186.1|
            predicted protein [Populus trichocarpa]
          Length = 325

 Score =  139 bits (351), Expect = 1e-30
 Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 19/304 (6%)
 Frame = +2

Query: 200  KVATYGIGAAGLRNATASFPK--EQSLVPTRKGTKPIXXXXXXXXXXXXXXXPVLVHRPS 373
            KVA  G+  +G+R   +  P   EQS+   R  ++P+                  V RPS
Sbjct: 12   KVAGIGVVNSGIRGGISCVPPSVEQSV---RNASRPVSAIISSTPSGGEVA--ATVQRPS 66

Query: 374  W--DDWEFAGD-EEEFLLDSVQPMPRVVFGGVP-SLEEATEATSDLKQALEKEYFLNDFG 541
            W  D+WEFAG  EEE ++ S +P+ RVVFGG P SL+EA  AT +L  A +K Y  +   
Sbjct: 67   WELDEWEFAGGLEEETVVHSAEPVARVVFGGAPPSLQEAEAATFELNDAFQKVYLSSPNS 126

Query: 542  GKKSST----VQESTLLSSGDS-ETKACITSESAVIHSSVPKPVFQAFSLLKESPEAQGV 706
            G  SS     +    LL   DS ETK CI  +     + VPK   QAFSLL ESP+ Q V
Sbjct: 127  GTGSSVGGSQLSGLPLLRKSDSLETKDCIPCDPT--GAPVPKYAMQAFSLLNESPKIQTV 184

Query: 707  VASLASDKNVWDAVMKNAKVMEFIKNQ----QNSDSSDIDTNINHPFPVDETGKEESYSE 874
            VA++ASD NVW+AV +N  + +F+++Q    Q+S++ +   + +    V      E   +
Sbjct: 185  VAAVASDPNVWNAVWENEALQDFLQSQNTYTQSSEAKEFVRDTDFQDAVSSKNLAELSDD 244

Query: 875  TSE--NAGNEFMEFVEKVKIKVTDIISSLSGFFQSMFGGPVDEKISIDEN--GNAAVKTG 1042
             SE  ++  E ++ +  VK+ V D+++++S +FQ +F     E         G A ++  
Sbjct: 245  ESEAGSSQTELVDIINNVKLTVVDLVTNVSAYFQKIFSFSSAEHTPAANEIAGAATIEKT 304

Query: 1043 VGAS 1054
            +GAS
Sbjct: 305  IGAS 308


Top