BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001089
         (1870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehyd...   885   0.0  
ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, p...   876   0.0  
gb|ABK95002.1| unknown [Populus trichocarpa]                          873   0.0  
ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|2...   865   0.0  
ref|XP_002300008.1| predicted protein [Populus trichocarpa] gi|2...   862   0.0  

>ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
            mitochondrial [Vitis vinifera]
            gi|296085606|emb|CBI29381.3| unnamed protein product
            [Vitis vinifera]
          Length = 539

 Score =  885 bits (2286), Expect = 0.0
 Identities = 439/515 (85%), Positives = 480/515 (93%), Gaps = 1/515 (0%)
 Frame = +3

Query: 105  SHFSTATNPSPSPQNSPLRVRNLIGGEFVDSQANATIDVLNPATQDVVSQVPLTTNDEFK 284
            S FSTAT PS S Q +P RV NLIGG FVDSQ++  IDV+NPATQ VVSQ+PLT+N+EFK
Sbjct: 25   SRFSTATEPS-SKQRNPPRVPNLIGGSFVDSQSSEFIDVINPATQQVVSQIPLTSNEEFK 83

Query: 285  AAVSAAKQAFPSWRNTPITTRQRVMFKFQELIRRDMDKLAANITAEQGKTLKDAHGDVFR 464
            AAVSAAKQAFP+WRNTP+TTRQR+MFK Q+LIRRD+DKLA NIT EQGKTLKDAHGDVFR
Sbjct: 84   AAVSAAKQAFPAWRNTPVTTRQRIMFKLQQLIRRDIDKLAMNITTEQGKTLKDAHGDVFR 143

Query: 465  GLEVVEHACGMGTLQMGEFVSNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAV 644
            GLEVVEHACGM TLQMGEFV NVS+GIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAV
Sbjct: 144  GLEVVEHACGMATLQMGEFVPNVSSGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAV 203

Query: 645  TCGNTYVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHGTNDIVNNICDDKDIKAISFV 824
            TCGNT+VLKPSEKDPGAS++LAELAMEAGLP+GVLNIVHGT +IVN ICDD+DI+A+SFV
Sbjct: 204  TCGNTFVLKPSEKDPGASLMLAELAMEAGLPDGVLNIVHGTRNIVNAICDDEDIRAVSFV 263

Query: 825  GSNTAGMHIYSRAAAKGKRVQANMGAKNHAIILPDASVDATLNALVAAGFGAAGQRCMAL 1004
            GSNTAGMHIYSRA+AKGKRVQ+NMGAKNHAI+LPDAS+DATLNALVAAGFGAAGQRCMAL
Sbjct: 264  GSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVLPDASLDATLNALVAAGFGAAGQRCMAL 323

Query: 1005 STAVFVGDSKSWLDELHERANALKVNAGCEPGADLGPVISKQAKDRICRLIQAGVESGAR 1184
            ST VFVGDSKSW D+L ERA ALKVN+G EP ADLGPVISK+AK+RIC+LIQ GV+SGAR
Sbjct: 324  STVVFVGDSKSWEDKLLERAKALKVNSGTEPDADLGPVISKEAKERICKLIQNGVDSGAR 383

Query: 1185 LVLDGRKIVVPGYEDGNFVGPTILSNVTSDMECYKEEIFGPVLICMQANSLEEAIEIVNN 1364
            LVLDGR IVVPGYE GNF+GPTILS+VT+DMECYKEEIFGPVL+C+QA+SL+EAI IVN 
Sbjct: 384  LVLDGRNIVVPGYEHGNFIGPTILSDVTADMECYKEEIFGPVLLCIQADSLDEAINIVNR 443

Query: 1365 NEYGNGASIFTTSGVSARKFQNEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGK 1544
            N+YGNGASIFT+SGV ARKFQ EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGK
Sbjct: 444  NKYGNGASIFTSSGVDARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGK 503

Query: 1545 AGVQFYTQIKTVTQQWKDL-QGQGVSLAMPTSQKT 1646
            AGVQFYTQIKTVTQQWK L  G GVSLAMPTSQK+
Sbjct: 504  AGVQFYTQIKTVTQQWKGLASGSGVSLAMPTSQKS 538


>ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus
            communis] gi|223542563|gb|EEF44103.1|
            methylmalonate-semialdehyde dehydrogenase, putative
            [Ricinus communis]
          Length = 541

 Score =  876 bits (2263), Expect = 0.0
 Identities = 433/515 (84%), Positives = 472/515 (91%), Gaps = 1/515 (0%)
 Frame = +3

Query: 102  TSHFSTATNPSPSPQNSPLRVRNLIGGEFVDSQANATIDVLNPATQDVVSQVPLTTNDEF 281
            +S FSTA  PS +     LRV NLIGG FVDS++++ IDV+NPATQ++VS VPLTTN+EF
Sbjct: 26   SSDFSTAAQPSSTSHRKSLRVPNLIGGTFVDSKSSSAIDVINPATQEIVSHVPLTTNEEF 85

Query: 282  KAAVSAAKQAFPSWRNTPITTRQRVMFKFQELIRRDMDKLAANITAEQGKTLKDAHGDVF 461
            KAAVSAAK AFPSWRNTPITTRQR+M K QELIRRD+DKLA NIT EQGKTLKDAHGDVF
Sbjct: 86   KAAVSAAKLAFPSWRNTPITTRQRIMLKLQELIRRDIDKLAVNITCEQGKTLKDAHGDVF 145

Query: 462  RGLEVVEHACGMGTLQMGEFVSNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIA 641
            RGLEVVEHACGM TLQMGE+V NVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFP+A
Sbjct: 146  RGLEVVEHACGMATLQMGEYVPNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVA 205

Query: 642  VTCGNTYVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHGTNDIVNNICDDKDIKAISF 821
            VTCGNT+VLKPSEKDPGAS+ILAELAMEAGLP+GVLNIVHGTNDIVN ICDD DI+AISF
Sbjct: 206  VTCGNTFVLKPSEKDPGASIILAELAMEAGLPDGVLNIVHGTNDIVNAICDDDDIRAISF 265

Query: 822  VGSNTAGMHIYSRAAAKGKRVQANMGAKNHAIILPDASVDATLNALVAAGFGAAGQRCMA 1001
            VGSNTAGMHIY RA+AKGKRVQ+NMGAKNH I+LPDA++DATLNALVAAGFGAAGQRCMA
Sbjct: 266  VGSNTAGMHIYGRASAKGKRVQSNMGAKNHGIVLPDANMDATLNALVAAGFGAAGQRCMA 325

Query: 1002 LSTAVFVGDSKSWLDELHERANALKVNAGCEPGADLGPVISKQAKDRICRLIQAGVESGA 1181
            LST VFVGDS+SW ++L ERA ALKVNAG EP ADLGPVISKQAK+R+ RLIQ+GVESGA
Sbjct: 326  LSTVVFVGDSQSWENKLVERAKALKVNAGTEPDADLGPVISKQAKERVHRLIQSGVESGA 385

Query: 1182 RLVLDGRKIVVPGYEDGNFVGPTILSNVTSDMECYKEEIFGPVLICMQANSLEEAIEIVN 1361
            +L+LDGR IVVPGYE GNF+GPTILS VT+DMECYKEEIFGPVL+CMQA+S EEAI IVN
Sbjct: 386  KLLLDGRNIVVPGYELGNFIGPTILSGVTADMECYKEEIFGPVLLCMQADSFEEAINIVN 445

Query: 1362 NNEYGNGASIFTTSGVSARKFQNEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYG 1541
             N+YGNGA+IFTTSG +ARKFQ EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYG
Sbjct: 446  RNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYG 505

Query: 1542 KAGVQFYTQIKTVTQQWKDL-QGQGVSLAMPTSQK 1643
            KAGV FYTQIKT+TQQWKDL  G GVSLAMPTSQK
Sbjct: 506  KAGVNFYTQIKTITQQWKDLPSGSGVSLAMPTSQK 540


>gb|ABK95002.1| unknown [Populus trichocarpa]
          Length = 542

 Score =  873 bits (2256), Expect = 0.0
 Identities = 430/513 (83%), Positives = 471/513 (91%), Gaps = 1/513 (0%)
 Frame = +3

Query: 108  HFSTATNPSPSPQNSPLRVRNLIGGEFVDSQANATIDVLNPATQDVVSQVPLTTNDEFKA 287
            +FST      S   SP RV NLIGG+FVDSQ+++TIDV+NPATQ+VVSQ+PLTTN+EFKA
Sbjct: 29   YFSTGVVEPSSSLRSPPRVPNLIGGKFVDSQSSSTIDVINPATQEVVSQIPLTTNEEFKA 88

Query: 288  AVSAAKQAFPSWRNTPITTRQRVMFKFQELIRRDMDKLAANITAEQGKTLKDAHGDVFRG 467
            AVSAAK AFP+WRNTPITTRQRVM K QELIRRD DKLA NIT EQGKTLKDAHGDVFRG
Sbjct: 89   AVSAAKHAFPAWRNTPITTRQRVMLKLQELIRRDTDKLAMNITTEQGKTLKDAHGDVFRG 148

Query: 468  LEVVEHACGMGTLQMGEFVSNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVT 647
            LEVVEHACGM TLQMGE+V NV+NGIDT+SIREPLGVCAGICPFNFPAMIPLWMFP+AVT
Sbjct: 149  LEVVEHACGMATLQMGEYVPNVANGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVT 208

Query: 648  CGNTYVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHGTNDIVNNICDDKDIKAISFVG 827
            CGNT+VLKPSEKDPGAS+ILAELAMEAGLPNGVLNIVHGTNDIVN ICDD DI+AISFVG
Sbjct: 209  CGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIRAISFVG 268

Query: 828  SNTAGMHIYSRAAAKGKRVQANMGAKNHAIILPDASVDATLNALVAAGFGAAGQRCMALS 1007
            SNTAGMHIYSRA+AKGKRVQ+NMGAKNHAI+LPDA+ DATLNALVAAGFGAAGQRCMALS
Sbjct: 269  SNTAGMHIYSRASAKGKRVQSNMGAKNHAIVLPDANTDATLNALVAAGFGAAGQRCMALS 328

Query: 1008 TAVFVGDSKSWLDELHERANALKVNAGCEPGADLGPVISKQAKDRICRLIQAGVESGARL 1187
            T VFVGDS+SW ++L E A +LKVNAG EP ADLGPVISKQAK+R+C+LI++GVESGARL
Sbjct: 329  TVVFVGDSQSWENKLVECAKSLKVNAGTEPDADLGPVISKQAKERVCKLIESGVESGARL 388

Query: 1188 VLDGRKIVVPGYEDGNFVGPTILSNVTSDMECYKEEIFGPVLICMQANSLEEAIEIVNNN 1367
            +LDGR IVVPGYEDGNF+GPTILS VT+DM+CYKEEIFGPVL+C +A+S EEAI  VN N
Sbjct: 389  LLDGRNIVVPGYEDGNFIGPTILSGVTADMDCYKEEIFGPVLLCKEADSFEEAIHFVNRN 448

Query: 1368 EYGNGASIFTTSGVSARKFQNEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 1547
            +YGNGA+IFTTSG +ARKFQ EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA
Sbjct: 449  KYGNGAAIFTTSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 508

Query: 1548 GVQFYTQIKTVTQQWKDLQ-GQGVSLAMPTSQK 1643
            GV FYTQIKT+TQQWKDL  G GVSLAMPTSQK
Sbjct: 509  GVNFYTQIKTITQQWKDLPGGSGVSLAMPTSQK 541


>ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|222849625|gb|EEE87172.1|
            predicted protein [Populus trichocarpa]
          Length = 496

 Score =  865 bits (2236), Expect = 0.0
 Identities = 424/496 (85%), Positives = 464/496 (93%), Gaps = 1/496 (0%)
 Frame = +3

Query: 159  RVRNLIGGEFVDSQANATIDVLNPATQDVVSQVPLTTNDEFKAAVSAAKQAFPSWRNTPI 338
            RV NLIGG+FVDSQ+++TIDV+NPATQ+VVSQ+PLTTN+EFKAAVSAAK AFP+WRNTPI
Sbjct: 1    RVPNLIGGKFVDSQSSSTIDVINPATQEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPI 60

Query: 339  TTRQRVMFKFQELIRRDMDKLAANITAEQGKTLKDAHGDVFRGLEVVEHACGMGTLQMGE 518
            TTRQRVM K QELIRRD DKLA NIT EQGKTLKDAHGDVFRGLEVVEHACGM TLQMGE
Sbjct: 61   TTRQRVMLKLQELIRRDTDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGE 120

Query: 519  FVSNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTYVLKPSEKDPGAS 698
            +V NV+NGIDT+SIREPLGVCAGICPFNFPAMIPLWMFP+AVTCGNT+VLKPSEKDPGAS
Sbjct: 121  YVPNVANGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 180

Query: 699  MILAELAMEAGLPNGVLNIVHGTNDIVNNICDDKDIKAISFVGSNTAGMHIYSRAAAKGK 878
            +ILAELAMEAGLPNGVLNIVHGTNDIVN ICDD DI+AISFVGSNTAGMHIYSRA+AKGK
Sbjct: 181  IILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 240

Query: 879  RVQANMGAKNHAIILPDASVDATLNALVAAGFGAAGQRCMALSTAVFVGDSKSWLDELHE 1058
            RVQ+NMGAKNHAI+LPDA+ DATLNALVAAGFGAAGQRCMALST VFVGDS+SW ++L E
Sbjct: 241  RVQSNMGAKNHAIVLPDANTDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVE 300

Query: 1059 RANALKVNAGCEPGADLGPVISKQAKDRICRLIQAGVESGARLVLDGRKIVVPGYEDGNF 1238
             A +LKVNAG EP ADLGPVISKQAK+R+C+LI++GVESGARL+LDGR IVVPGYEDGNF
Sbjct: 301  CAKSLKVNAGTEPDADLGPVISKQAKERVCKLIESGVESGARLLLDGRNIVVPGYEDGNF 360

Query: 1239 VGPTILSNVTSDMECYKEEIFGPVLICMQANSLEEAIEIVNNNEYGNGASIFTTSGVSAR 1418
            +GPTILS VT+DM+CYKEEIFGPVL+C +A+S EEAI  VN N+YGNGA+IFTTSG +AR
Sbjct: 361  IGPTILSGVTADMDCYKEEIFGPVLLCKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAAR 420

Query: 1419 KFQNEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFYTQIKTVTQQWKD 1598
            KFQ EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGV FYTQIKT+TQQWKD
Sbjct: 421  KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKD 480

Query: 1599 LQ-GQGVSLAMPTSQK 1643
            L  G GVSLAMPTSQK
Sbjct: 481  LPGGSGVSLAMPTSQK 496


>ref|XP_002300008.1| predicted protein [Populus trichocarpa] gi|222847266|gb|EEE84813.1|
            predicted protein [Populus trichocarpa]
          Length = 497

 Score =  862 bits (2228), Expect = 0.0
 Identities = 421/496 (84%), Positives = 464/496 (93%), Gaps = 1/496 (0%)
 Frame = +3

Query: 159  RVRNLIGGEFVDSQANATIDVLNPATQDVVSQVPLTTNDEFKAAVSAAKQAFPSWRNTPI 338
            RV NLIGG+FVDSQ+++TIDV+NPATQ+ VS+VP TTN+EF+AAVSAAKQAFP+WRNTPI
Sbjct: 1    RVPNLIGGKFVDSQSSSTIDVINPATQEAVSRVPFTTNEEFRAAVSAAKQAFPAWRNTPI 60

Query: 339  TTRQRVMFKFQELIRRDMDKLAANITAEQGKTLKDAHGDVFRGLEVVEHACGMGTLQMGE 518
            TTRQRVM K QELIRRD+DKLA NIT EQGKTLKDAHGDVFRGLEVVEHACGM TLQMGE
Sbjct: 61   TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGE 120

Query: 519  FVSNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTYVLKPSEKDPGAS 698
            +V NVSNGIDT+SIREPLGVCAGICPFNFPAMIPLWMFP+AVTCGNT++LKPSEKDPGAS
Sbjct: 121  YVPNVSNGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS 180

Query: 699  MILAELAMEAGLPNGVLNIVHGTNDIVNNICDDKDIKAISFVGSNTAGMHIYSRAAAKGK 878
            +ILAELAMEAGLP+GVLNIVHGTND+VN ICDD DI+AISFVGSNTAGMHIYSRA+AKGK
Sbjct: 181  IILAELAMEAGLPDGVLNIVHGTNDVVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 240

Query: 879  RVQANMGAKNHAIILPDASVDATLNALVAAGFGAAGQRCMALSTAVFVGDSKSWLDELHE 1058
            RVQ+NMGAKNHAI+LPDA+VDATLNALVAAGFGAAGQRCMALST VFVGD +SW ++L E
Sbjct: 241  RVQSNMGAKNHAIVLPDANVDATLNALVAAGFGAAGQRCMALSTVVFVGDPQSWENKLVE 300

Query: 1059 RANALKVNAGCEPGADLGPVISKQAKDRICRLIQAGVESGARLVLDGRKIVVPGYEDGNF 1238
            RA +LKVN+G EP ADLGPVISKQAK+R+CRLIQ+GVESGARL+LDGR IVVPG+E GNF
Sbjct: 301  RAKSLKVNSGMEPDADLGPVISKQAKERVCRLIQSGVESGARLLLDGRNIVVPGFEHGNF 360

Query: 1239 VGPTILSNVTSDMECYKEEIFGPVLICMQANSLEEAIEIVNNNEYGNGASIFTTSGVSAR 1418
            +GPTILS VT+DMECYKEEIFGPVL+CM+A S EEAI I+N N+YGNGA+IFT SG +AR
Sbjct: 361  IGPTILSGVTADMECYKEEIFGPVLLCMEAGSFEEAINILNRNKYGNGAAIFTASGAAAR 420

Query: 1419 KFQNEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFYTQIKTVTQQWKD 1598
            KFQ EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGV FYTQIKT+TQQWKD
Sbjct: 421  KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKD 480

Query: 1599 LQ-GQGVSLAMPTSQK 1643
            L  G GVSLAMPTSQK
Sbjct: 481  LPGGSGVSLAMPTSQK 496