BLASTX nr result

ID: Cimicifuga21_contig00001067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001067
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40465.1| ribosomal protein S27-like protein [Solanum tuber...   155   4e-36
emb|CBI21255.3| unnamed protein product [Vitis vinifera]              155   6e-36
ref|XP_002273119.1| PREDICTED: 40S ribosomal protein S27-2 [Viti...   155   6e-36
gb|ABB87121.1| ribosomal protein S27-like protein-like [Solanum ...   154   2e-35
emb|CBI29279.3| unnamed protein product [Vitis vinifera]              153   2e-35

>gb|ABA40465.1| ribosomal protein S27-like protein [Solanum tuberosum]
           gi|418729767|gb|AFX66976.1| ribosomal protein S27
           [Solanum tuberosum]
          Length = 86

 Score =  155 bits (393), Expect = 4e-36
 Identities = 74/86 (86%), Positives = 74/86 (86%)
 Frame = +1

Query: 82  MVLPNDVDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 261
           MVLPNDVDLLNPPA            VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLPNDVDLLNPPAEQEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 262 CQTVLCQPTGGRARLTEGCSFRRKGD 339
           CQTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRRKGD 86


>emb|CBI21255.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  155 bits (392), Expect = 6e-36
 Identities = 73/93 (78%), Positives = 77/93 (82%)
 Frame = +1

Query: 61  SSPLPAKMVLPNDVDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQ 240
           S+ +  KMVLPND+DLLNPPA            VQSPNSFFMDVKCQGCFNITTVFSHSQ
Sbjct: 68  SAKVSTKMVLPNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQ 127

Query: 241 TVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 339
           TVVVCGNCQ VLCQPTGGRARLTEGCSFR+KGD
Sbjct: 128 TVVVCGNCQLVLCQPTGGRARLTEGCSFRKKGD 160


>ref|XP_002273119.1| PREDICTED: 40S ribosomal protein S27-2 [Vitis vinifera]
           gi|147771740|emb|CAN78160.1| hypothetical protein
           VITISV_040920 [Vitis vinifera]
          Length = 86

 Score =  155 bits (392), Expect = 6e-36
 Identities = 73/86 (84%), Positives = 74/86 (86%)
 Frame = +1

Query: 82  MVLPNDVDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 261
           MVLPND+DLLNPPA            VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLPNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 262 CQTVLCQPTGGRARLTEGCSFRRKGD 339
           CQTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRRKGD 86


>gb|ABB87121.1| ribosomal protein S27-like protein-like [Solanum tuberosum]
          Length = 86

 Score =  154 bits (388), Expect = 2e-35
 Identities = 73/86 (84%), Positives = 74/86 (86%)
 Frame = +1

Query: 82  MVLPNDVDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 261
           MVLPNDVDLLNPPA            VQSP+SFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLPNDVDLLNPPAEQEKRKHKLKRLVQSPDSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 262 CQTVLCQPTGGRARLTEGCSFRRKGD 339
           CQTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRRKGD 86


>emb|CBI29279.3| unnamed protein product [Vitis vinifera]
          Length = 87

 Score =  153 bits (387), Expect = 2e-35
 Identities = 72/85 (84%), Positives = 73/85 (85%)
 Frame = +1

Query: 85  VLPNDVDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 264
           VLPND+DLLNPPA            VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 3   VLPNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 62

Query: 265 QTVLCQPTGGRARLTEGCSFRRKGD 339
           QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 63  QTVLCQPTGGRARLTEGCSFRRKGD 87


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