BLASTX nr result

ID: Cimicifuga21_contig00001063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001063
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532074.1| PREDICTED: oxygen-evolving enhancer protein ...   381   e-103
sp|P12302.1|PSBP_SPIOL RecName: Full=Oxygen-evolving enhancer pr...   370   e-100
ref|XP_003551942.1| PREDICTED: oxygen-evolving enhancer protein ...   369   e-100
gb|AFK47979.1| unknown [Lotus japonicus]                              369   e-99 
gb|AFK44592.1| unknown [Lotus japonicus]                              369   e-99 

>ref|XP_003532074.1| PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic-like
           [Glycine max]
          Length = 262

 Score =  381 bits (979), Expect = e-103
 Identities = 193/264 (73%), Positives = 219/264 (82%), Gaps = 1/264 (0%)
 Frame = -2

Query: 976 SSTACFLHHHALSTPXXXXXXXXXRQVSCNKPNQLVVRAQKQANEDGE-VTPAVSRRLAL 800
           +ST CFLHHHAL+TP           V   KPN +V +AQKQ  ++GE  T  VSRRLAL
Sbjct: 2   ASTQCFLHHHALTTPTRASSQRL---VVSTKPNHIVCKAQKQVVQEGEDTTNIVSRRLAL 58

Query: 799 SVLIGAAAIGSKVSPADAAYGEAANVFGKPKTNTEFIPVSRDDFKIAIPSKWNPSKEVEY 620
           +VLIGAAA+GSKV+PADAAYGEAANVFGKPKTNT+F+P + D FK++IPSKWNPSKEVEY
Sbjct: 59  TVLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEVEY 118

Query: 619 PGQVLRYEXXXXXXXXXXVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYSGKTDSEGG 440
           PGQVLRYE          VM+T T KKSI DYGSPEEFL+QVDYLLGKQA+ G+TD+EGG
Sbjct: 119 PGQVLRYEDNFDSTSNVAVMVTATDKKSITDYGSPEEFLSQVDYLLGKQAFFGQTDAEGG 178

Query: 439 FDSGSVATANILESATPVINGKQYYSISVLTRTADGDEGGKHQLITATVSDGKLYICKAQ 260
           FDS +VATANILES+TPVI+GKQYYS++VLTRTADGDEGGKHQLI ATV DGKLYICKAQ
Sbjct: 179 FDSNAVATANILESSTPVIDGKQYYSLTVLTRTADGDEGGKHQLIAATVKDGKLYICKAQ 238

Query: 259 AGDKRWFKGAKKFVEGTLSSFSVA 188
           AGDKRWFKGA++FVE T SSFSVA
Sbjct: 239 AGDKRWFKGARRFVESTASSFSVA 262


>sp|P12302.1|PSBP_SPIOL RecName: Full=Oxygen-evolving enhancer protein 2, chloroplastic;
           Short=OEE2; AltName: Full=23 kDa subunit of oxygen
           evolving system of photosystem II; AltName: Full=23 kDa
           thylakoid membrane protein; AltName: Full=OEC 23 kDa
           subunit; Flags: Precursor gi|21265|emb|CAA29055.1| 23
           kDa OEC protein [Spinacia oleracea]
           gi|225596|prf||1307179A luminal protein 23kD
          Length = 267

 Score =  370 bits (949), Expect = e-100
 Identities = 191/266 (71%), Positives = 216/266 (81%), Gaps = 3/266 (1%)
 Frame = -2

Query: 976 SSTACFLHHHA-LSTPXXXXXXXXXR-QVSCNKPNQLVVRAQKQA-NEDGEVTPAVSRRL 806
           +STACFLHHHA +S+P         R Q    KPNQ+V +AQKQ  NE   +   VSRRL
Sbjct: 2   ASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRL 61

Query: 805 ALSVLIGAAAIGSKVSPADAAYGEAANVFGKPKTNTEFIPVSRDDFKIAIPSKWNPSKEV 626
           AL+VLIGAAA+GSKVSPADAAYGEAANVFGKPK NTEF+P + D FK+ +PSKWNPSKE 
Sbjct: 62  ALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEK 121

Query: 625 EYPGQVLRYEXXXXXXXXXXVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYSGKTDSE 446
           E+PGQVLRYE          V++ PT KKSI D+GSPE+FL+QVDYLLGKQAY GKTDSE
Sbjct: 122 EFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSE 181

Query: 445 GGFDSGSVATANILESATPVINGKQYYSISVLTRTADGDEGGKHQLITATVSDGKLYICK 266
           GGFDSG VA+AN+LES+TPV++GKQYYSI+VLTRTADGDEGGKHQ+I ATV DGKLYICK
Sbjct: 182 GGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICK 241

Query: 265 AQAGDKRWFKGAKKFVEGTLSSFSVA 188
           AQAGDKRWFKGAKKFVE   SSFSVA
Sbjct: 242 AQAGDKRWFKGAKKFVESATSSFSVA 267


>ref|XP_003551942.1| PREDICTED: oxygen-evolving enhancer protein 2, chloroplastic-like
           [Glycine max]
          Length = 265

 Score =  369 bits (948), Expect = e-100
 Identities = 191/267 (71%), Positives = 219/267 (82%), Gaps = 4/267 (1%)
 Frame = -2

Query: 976 SSTACFLHHHALSTPXXXXXXXXXRQVSCNKPNQLVVRA-QKQAN-EDGE--VTPAVSRR 809
           +ST CFLHHHAL+TP           V   KPN +V +A QKQ   ++GE   T  VSRR
Sbjct: 2   ASTQCFLHHHALTTPARASTQRL---VVSTKPNHIVCKAAQKQVTVQEGEDTTTGLVSRR 58

Query: 808 LALSVLIGAAAIGSKVSPADAAYGEAANVFGKPKTNTEFIPVSRDDFKIAIPSKWNPSKE 629
           LAL+VLIGAAA+GSKV+PADAAYGEAANVFGKPKTNT+F+  + + FK++IPSKWNPSKE
Sbjct: 59  LALTVLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKE 118

Query: 628 VEYPGQVLRYEXXXXXXXXXXVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYSGKTDS 449
           VEYPGQVLRYE          VM+T T KKSI DYGSPEEFL+QVDYLLGKQA+ G+TD+
Sbjct: 119 VEYPGQVLRYEDNFDSTSNVAVMVTATDKKSITDYGSPEEFLSQVDYLLGKQAFFGQTDA 178

Query: 448 EGGFDSGSVATANILESATPVINGKQYYSISVLTRTADGDEGGKHQLITATVSDGKLYIC 269
           EGGFDS +VATANILES+TPV++GKQYYS++VLTRTADGDEGGKHQLITATV DGKLYIC
Sbjct: 179 EGGFDSNAVATANILESSTPVVDGKQYYSLTVLTRTADGDEGGKHQLITATVKDGKLYIC 238

Query: 268 KAQAGDKRWFKGAKKFVEGTLSSFSVA 188
           KAQAGDKRWFKGA++FVE T SSFSVA
Sbjct: 239 KAQAGDKRWFKGARRFVESTASSFSVA 265


>gb|AFK47979.1| unknown [Lotus japonicus]
          Length = 259

 Score =  369 bits (946), Expect = e-99
 Identities = 187/263 (71%), Positives = 216/263 (82%)
 Frame = -2

Query: 976 SSTACFLHHHALSTPXXXXXXXXXRQVSCNKPNQLVVRAQKQANEDGEVTPAVSRRLALS 797
           +ST CFLHHHAL+TP          QV   KPNQ+V RAQKQ  +D E    VSRRLAL+
Sbjct: 2   ASTQCFLHHHALTTPTRTSSQR---QVVSIKPNQIVCRAQKQ--QDVEDVSPVSRRLALT 56

Query: 796 VLIGAAAIGSKVSPADAAYGEAANVFGKPKTNTEFIPVSRDDFKIAIPSKWNPSKEVEYP 617
           +LIGAAA+GSKVSPADAAYGEAANVFGKPK+NT+F+P + D FK++IP+KWNPSKE E+P
Sbjct: 57  LLIGAAAVGSKVSPADAAYGEAANVFGKPKSNTDFLPYNGDGFKLSIPAKWNPSKEREFP 116

Query: 616 GQVLRYEXXXXXXXXXXVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYSGKTDSEGGF 437
           GQVLRYE          V+IT T KKSI DYGSPEEFL++VDYLLGKQA+ G+TDSEGGF
Sbjct: 117 GQVLRYEDNFDATSNVSVIITATDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGF 176

Query: 436 DSGSVATANILESATPVINGKQYYSISVLTRTADGDEGGKHQLITATVSDGKLYICKAQA 257
           D+ +VA ANILES+ PV+ GKQYY++SVLTRTADGDEGGKHQ+ITATV+DGKLYICKAQA
Sbjct: 177 DTNAVAVANILESSAPVVGGKQYYNVSVLTRTADGDEGGKHQIITATVNDGKLYICKAQA 236

Query: 256 GDKRWFKGAKKFVEGTLSSFSVA 188
           GDKRWFKGA+KFVE   SSFSVA
Sbjct: 237 GDKRWFKGARKFVESAASSFSVA 259


>gb|AFK44592.1| unknown [Lotus japonicus]
          Length = 259

 Score =  369 bits (946), Expect = e-99
 Identities = 187/263 (71%), Positives = 216/263 (82%)
 Frame = -2

Query: 976 SSTACFLHHHALSTPXXXXXXXXXRQVSCNKPNQLVVRAQKQANEDGEVTPAVSRRLALS 797
           +ST CFLHHHAL+TP          QV   KPNQ+V RAQKQ  +D E    VSRRLAL+
Sbjct: 2   ASTQCFLHHHALTTPTRTSSQR---QVVSIKPNQIVCRAQKQ--QDVEDVSPVSRRLALT 56

Query: 796 VLIGAAAIGSKVSPADAAYGEAANVFGKPKTNTEFIPVSRDDFKIAIPSKWNPSKEVEYP 617
           +LIGAAA+GSKVSPADAAYGEAANVFGKPK+NT+F+P + D FK++IP+KWNPSKE E+P
Sbjct: 57  LLIGAAAVGSKVSPADAAYGEAANVFGKPKSNTDFLPYNGDGFKLSIPAKWNPSKEREFP 116

Query: 616 GQVLRYEXXXXXXXXXXVMITPTTKKSIADYGSPEEFLAQVDYLLGKQAYSGKTDSEGGF 437
           GQVLRYE          V+IT T KKSI DYGSPEEFL++VDYLLGKQA+ G+TDSEGGF
Sbjct: 117 GQVLRYEDNFDATSNVSVIITATDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGF 176

Query: 436 DSGSVATANILESATPVINGKQYYSISVLTRTADGDEGGKHQLITATVSDGKLYICKAQA 257
           D+ +VA ANILES+ PV+ GKQYY++SVLTRTADGDEGGKHQ+ITATV+DGKLYICKAQA
Sbjct: 177 DANAVAVANILESSAPVVGGKQYYNVSVLTRTADGDEGGKHQIITATVNDGKLYICKAQA 236

Query: 256 GDKRWFKGAKKFVEGTLSSFSVA 188
           GDKRWFKGA+KFVE   SSFSVA
Sbjct: 237 GDKRWFKGARKFVESAASSFSVA 259


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