BLASTX nr result

ID: Cimicifuga21_contig00001050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001050
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isofo...   113   1e-23
emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinife...   113   1e-23
ref|XP_002520190.1| transcription factor, putative [Ricinus comm...   110   2e-22
gb|ADL36782.1| MYBR domain class transcription factor [Malus x d...   107   8e-22
ref|XP_002888750.1| hypothetical protein ARALYDRAFT_476127 [Arab...   106   2e-21

>ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isoform 2 [Vitis vinifera]
          Length = 288

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/94 (61%), Positives = 70/94 (74%)
 Frame = +3

Query: 27  MSRNCSQCGNNGHNSRTCTTESGGDDSGATTVTAPSGGFMLFGVRVTEGSIRKSVSLNDL 206
           MSR+CSQCGNNGHNSRTCT ESGG  + A  +       MLFGVR+TEG+ RKS S+ +L
Sbjct: 1   MSRSCSQCGNNGHNSRTCT-ESGGAGAAANDI-------MLFGVRITEGAFRKSASMTNL 52

Query: 207 SQYQQPQEPNPDLHSGYVTDDAVHNSIRNRERKR 308
           SQY+QPQ+ N D  +GY +DD VH S R+RERKR
Sbjct: 53  SQYEQPQDSNAD--AGYASDDVVHASARSRERKR 84


>emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinifera]
           gi|296086475|emb|CBI32064.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/94 (61%), Positives = 70/94 (74%)
 Frame = +3

Query: 27  MSRNCSQCGNNGHNSRTCTTESGGDDSGATTVTAPSGGFMLFGVRVTEGSIRKSVSLNDL 206
           MSR+CSQCGNNGHNSRTCT ESGG  + A  +       MLFGVR+TEG+ RKS S+ +L
Sbjct: 1   MSRSCSQCGNNGHNSRTCT-ESGGAGAAANDI-------MLFGVRITEGAFRKSASMTNL 52

Query: 207 SQYQQPQEPNPDLHSGYVTDDAVHNSIRNRERKR 308
           SQY+QPQ+ N D  +GY +DD VH S R+RERKR
Sbjct: 53  SQYEQPQDSNAD--AGYASDDVVHASARSRERKR 84


>ref|XP_002520190.1| transcription factor, putative [Ricinus communis]
           gi|223540682|gb|EEF42245.1| transcription factor,
           putative [Ricinus communis]
          Length = 331

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/97 (62%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
 Frame = +3

Query: 27  MSRNCSQCGNNGHNSRTCTTESGGDDSGATTVTAPSGGFMLFGVRV-TEG-SIRKSVSLN 200
           MSR+CSQCGNNGHNSRTC   SGG  +G         G MLFGVRV  EG S RKSVS+N
Sbjct: 1   MSRSCSQCGNNGHNSRTCGENSGGSAAG-------ESGIMLFGVRVMMEGASFRKSVSMN 53

Query: 201 DLSQYQQPQEPNPDL-HSGYVTDDAVHNSIRNRERKR 308
           +LSQY QPQ+PN D+  +GY +DD VH S R+RERKR
Sbjct: 54  NLSQYDQPQDPNADVAAAGYESDDVVHASGRSRERKR 90


>gb|ADL36782.1| MYBR domain class transcription factor [Malus x domestica]
          Length = 323

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = +3

Query: 27  MSRNCSQCGNNGHNSRTCTTESGGDDSGATTVTAPSGGFMLFGVRVTEGS-IRKSVSLND 203
           MSR CSQCGNNGHNSRTC+  SGG   G         G MLFGVRVTEG+  RKSVS+N+
Sbjct: 1   MSRTCSQCGNNGHNSRTCSDVSGGGCGGPIA----ENGIMLFGVRVTEGNAFRKSVSMNN 56

Query: 204 LSQYQQPQEPNPDLHSGYVTDDAVHNSIRNRERKR 308
           LSQY++PQ+ + +  +GY +D+ VH S   RER+R
Sbjct: 57  LSQYERPQQADTNAEAGYASDEVVHASGHRRERRR 91


>ref|XP_002888750.1| hypothetical protein ARALYDRAFT_476127 [Arabidopsis lyrata subsp.
           lyrata] gi|297334591|gb|EFH65009.1| hypothetical protein
           ARALYDRAFT_476127 [Arabidopsis lyrata subsp. lyrata]
          Length = 249

 Score =  106 bits (264), Expect = 2e-21
 Identities = 60/103 (58%), Positives = 70/103 (67%), Gaps = 9/103 (8%)
 Frame = +3

Query: 27  MSRNCSQCGNNGHNSRTCTTE--SGGDDSGATTVTAPSGG----FMLFGVRVTEGS---I 179
           MSR+CSQCGNN HNSRTC TE  + GD++G       SGG     MLFGVRVTE S    
Sbjct: 1   MSRSCSQCGNNAHNSRTCPTEITTTGDNNGG------SGGGEKAIMLFGVRVTEASSSCF 54

Query: 180 RKSVSLNDLSQYQQPQEPNPDLHSGYVTDDAVHNSIRNRERKR 308
           RKS+S+N+LSQ+ Q  +PNP    GY +DD VH S RNRERKR
Sbjct: 55  RKSLSMNNLSQFDQTPDPNPADDGGYASDDVVHASGRNRERKR 97


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