BLASTX nr result

ID: Cimicifuga21_contig00001047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001047
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30170.3| unnamed protein product [Vitis vinifera]              386   e-105
ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vit...   386   e-105
ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like...   380   e-103
ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like...   379   e-102
ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like...   378   e-102

>emb|CBI30170.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  386 bits (991), Expect = e-105
 Identities = 189/231 (81%), Positives = 195/231 (84%)
 Frame = +1

Query: 88  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 267
           MDRDWGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDRDWGSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 268 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPVQPQPHKRKVNLRKTVKIGRPGYRVTKQ 447
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP QPQPHKRKV++RKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 448 FDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQTCDKKYQYLLFAAEPYEIIAFK 627
           FDPETKQRSLLFQIEYPEIEDL+KPRHRFMSSFEQRVQ+ DK+YQYLLFAAEPYEIIAFK
Sbjct: 121 FDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEIIAFK 180

Query: 628 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKVKXXXXXXXXXXXVANGMEA 780
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK K            ANG  A
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTA 231


>ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vitis vinifera]
          Length = 357

 Score =  386 bits (991), Expect = e-105
 Identities = 189/231 (81%), Positives = 195/231 (84%)
 Frame = +1

Query: 88  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 267
           MDRDWGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDRDWGSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 268 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPVQPQPHKRKVNLRKTVKIGRPGYRVTKQ 447
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP QPQPHKRKV++RKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 448 FDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQTCDKKYQYLLFAAEPYEIIAFK 627
           FDPETKQRSLLFQIEYPEIEDL+KPRHRFMSSFEQRVQ+ DK+YQYLLFAAEPYEIIAFK
Sbjct: 121 FDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEIIAFK 180

Query: 628 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKVKXXXXXXXXXXXVANGMEA 780
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK K            ANG  A
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTA 231


>ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 350

 Score =  380 bits (975), Expect = e-103
 Identities = 185/228 (81%), Positives = 191/228 (83%)
 Frame = +1

Query: 88  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 267
           MDR+WGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 268 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPVQPQPHKRKVNLRKTVKIGRPGYRVTKQ 447
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKD+P QPQPHKRKV LRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDSPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ 120

Query: 448 FDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQTCDKKYQYLLFAAEPYEIIAFK 627
           +DPETKQRSLLFQIEYPEIEDL+KPRHRFMSS+EQRVQ  DK YQYLLFAAEPYEI+AFK
Sbjct: 121 YDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFK 180

Query: 628 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKVKXXXXXXXXXXXVANG 771
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK K            ANG
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPATTANG 228


>ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 349

 Score =  379 bits (973), Expect = e-102
 Identities = 185/228 (81%), Positives = 190/228 (83%)
 Frame = +1

Query: 88  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 267
           MDR+WGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 268 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPVQPQPHKRKVNLRKTVKIGRPGYRVTKQ 447
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP QPQPHKRKV LRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ 120

Query: 448 FDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQTCDKKYQYLLFAAEPYEIIAFK 627
           +DPETKQRSLLFQIEYPEIEDL KPRHRFMSS+EQRVQ  DK+YQYLLFAAEPYEI+AFK
Sbjct: 121 YDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK 180

Query: 628 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKVKXXXXXXXXXXXVANG 771
           VPSTEIDKSTP FFSHWDPDSKMFTLQLYFK K            ANG
Sbjct: 181 VPSTEIDKSTPNFFSHWDPDSKMFTLQLYFKSKPPEANKPQPASTANG 228


>ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like [Cucumis sativus]
          Length = 341

 Score =  378 bits (970), Expect = e-102
 Identities = 185/228 (81%), Positives = 192/228 (84%)
 Frame = +1

Query: 88  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKLCLTL 267
           MDR+WGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 268 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPVQPQPHKRKVNLRKTVKIGRPGYRVTKQ 447
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP QPQPHKRKV++RKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 448 FDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQTCDKKYQYLLFAAEPYEIIAFK 627
           FD ETKQRSLLFQIEYPEIEDL+KPRHRFMSS+EQRVQ  DK+YQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 628 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKVKXXXXXXXXXXXVANG 771
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK K            ANG
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANG 228


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