BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00001003
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nico...   102   2e-23
ref|NP_001054354.1| Os04g0690800 [Oryza sativa Japonica Group] g...   102   2e-23
emb|CAE01809.2| OSJNBa0039K24.28 [Oryza sativa Japonica Group] g...   102   2e-23
emb|CAH68096.1| B0518A01.1 [Oryza sativa Indica Group] gi|116311...   102   2e-23
gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nico...   100   6e-23

>gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
           gi|186926676|gb|ACC95540.1| chloroplast photosystem II
           22 kDa component [Nicotiana benthamiana]
          Length = 277

 Score =  102 bits (254), Expect(2) = 2e-23
 Identities = 69/163 (42%), Positives = 88/163 (53%), Gaps = 25/163 (15%)
 Frame = +2

Query: 371 LASVSANIPQASSTTAIEDGNSSETDV--------------VPTPKVIIDQDSDPNATIV 508
           L S+S   P ASS+++    + + T V              VP PK  ++      +  +
Sbjct: 35  LPSLSLKYPSASSSSSSSSSHFTSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGI 94

Query: 509 EIT-----FGDRLGALLDTASLLGEGITGKGILSQLNIETGIPIYEAEP---XXXXXXXX 664
             T     F  R+  +   ASLLGE ITGKGIL+QLN+ETGIPIYEAEP           
Sbjct: 95  GFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLL 154

Query: 665 XXXXXXXD*GRFVDD---PSGLEKAVIPPGKGFRSALGLPEGG 784
                  D G+F+DD   P+GL+KAVIPPGKGF+SALGL EGG
Sbjct: 155 GAIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSALGLSEGG 197



 Score = 33.9 bits (76), Expect(2) = 2e-23
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 877 GHLFGFTKTIELFVGRLAQ 933
           G LFGFTK  ELFVGRLAQ
Sbjct: 197 GPLFGFTKANELFVGRLAQ 215


>ref|NP_001054354.1| Os04g0690800 [Oryza sativa Japonica Group]
           gi|113565925|dbj|BAF16268.1| Os04g0690800 [Oryza sativa
           Japonica Group]
          Length = 254

 Score =  102 bits (253), Expect(2) = 2e-23
 Identities = 56/92 (60%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
 Frame = +2

Query: 518 FGDRLGALLDTASLLGEGITGKGILSQLNIETGIPIYEAEP---XXXXXXXXXXXXXXXD 688
           F  R+  L   ASLLGE +TGKGIL+QLN+ETGIPIYEAEP                  D
Sbjct: 82  FVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGD 141

Query: 689 *GRFVDDPSGLEKAVIPPGKGFRSALGLPEGG 784
            GRFVDD +GLE+AVIPPGKGFR+ALGL EGG
Sbjct: 142 RGRFVDDATGLERAVIPPGKGFRAALGLSEGG 173



 Score = 33.9 bits (76), Expect(2) = 2e-23
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 877 GHLFGFTKTIELFVGRLAQ 933
           G LFGFTK  ELFVGRLAQ
Sbjct: 173 GPLFGFTKANELFVGRLAQ 191


>emb|CAE01809.2| OSJNBa0039K24.28 [Oryza sativa Japonica Group]
           gi|125592162|gb|EAZ32512.1| hypothetical protein
           OsJ_16732 [Oryza sativa Japonica Group]
          Length = 248

 Score =  102 bits (253), Expect(2) = 2e-23
 Identities = 56/92 (60%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
 Frame = +2

Query: 518 FGDRLGALLDTASLLGEGITGKGILSQLNIETGIPIYEAEP---XXXXXXXXXXXXXXXD 688
           F  R+  L   ASLLGE +TGKGIL+QLN+ETGIPIYEAEP                  D
Sbjct: 76  FVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGD 135

Query: 689 *GRFVDDPSGLEKAVIPPGKGFRSALGLPEGG 784
            GRFVDD +GLE+AVIPPGKGFR+ALGL EGG
Sbjct: 136 RGRFVDDATGLERAVIPPGKGFRAALGLSEGG 167



 Score = 33.9 bits (76), Expect(2) = 2e-23
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 877 GHLFGFTKTIELFVGRLAQ 933
           G LFGFTK  ELFVGRLAQ
Sbjct: 167 GPLFGFTKANELFVGRLAQ 185


>emb|CAH68096.1| B0518A01.1 [Oryza sativa Indica Group] gi|116311997|emb|CAJ86355.1|
           H0814G11.22 [Oryza sativa Indica Group]
           gi|125550332|gb|EAY96154.1| hypothetical protein
           OsI_18034 [Oryza sativa Indica Group]
          Length = 248

 Score =  102 bits (253), Expect(2) = 2e-23
 Identities = 56/92 (60%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
 Frame = +2

Query: 518 FGDRLGALLDTASLLGEGITGKGILSQLNIETGIPIYEAEP---XXXXXXXXXXXXXXXD 688
           F  R+  L   ASLLGE +TGKGIL+QLN+ETGIPIYEAEP                  D
Sbjct: 76  FVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGD 135

Query: 689 *GRFVDDPSGLEKAVIPPGKGFRSALGLPEGG 784
            GRFVDD +GLE+AVIPPGKGFR+ALGL EGG
Sbjct: 136 RGRFVDDATGLERAVIPPGKGFRAALGLSEGG 167



 Score = 33.9 bits (76), Expect(2) = 2e-23
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 877 GHLFGFTKTIELFVGRLAQ 933
           G LFGFTK  ELFVGRLAQ
Sbjct: 167 GPLFGFTKANELFVGRLAQ 185


>gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
          Length = 274

 Score =  100 bits (249), Expect(2) = 6e-23
 Identities = 67/150 (44%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
 Frame = +2

Query: 374 ASVSANIPQASSTTAI--EDGNSSETDVVPTPKVIIDQDSDPNATIVEIT-----FGDRL 532
           AS S++    S+T A+      +    VVP PK  ++      +  +  T     F  R+
Sbjct: 45  ASSSSSSHFTSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRV 104

Query: 533 GALLDTASLLGEGITGKGILSQLNIETGIPIYEAEP---XXXXXXXXXXXXXXXD*GRFV 703
             +   ASLLGE ITGKGIL+QLN+ETGIPIYEAEP                  D G+F+
Sbjct: 105 AMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFI 164

Query: 704 DDP---SGLEKAVIPPGKGFRSALGLPEGG 784
           DDP   +GL+KAVIPPGKGF+SALGL EGG
Sbjct: 165 DDPVPATGLDKAVIPPGKGFKSALGLSEGG 194



 Score = 33.9 bits (76), Expect(2) = 6e-23
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 877 GHLFGFTKTIELFVGRLAQ 933
           G LFGFTK  ELFVGRLAQ
Sbjct: 194 GPLFGFTKANELFVGRLAQ 212