BLASTX nr result
ID: Cimicifuga21_contig00000985
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00000985
(1448 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|... 123 e-105
ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago ... 162 4e-69
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 243 9e-62
ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|35550... 103 6e-53
ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|35548... 100 4e-52
>ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|AES92424.1| Ycf68
[Medicago truncatula]
Length = 501
Score = 123 bits (308), Expect(4) = e-105
Identities = 67/108 (62%), Positives = 74/108 (68%)
Frame = -1
Query: 1331 GNNSWKRLLIPRRLRSKRRNPPEEGLASD*LVGEAIAYQGDDQ*LVREDDQPHWD*DTAQ 1152
GNNSWKRLLIPR+LRS+RRNPP++GLA Q
Sbjct: 85 GNNSWKRLLIPRKLRSERRNPPKDGLA--------------------------------Q 112
Query: 1151 TPTGGSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRSNDGIWGISI 1008
TPTGGSSGEFSAMGESLTEQCRVEV+GLRV+NFFS RR+NDGI GISI
Sbjct: 113 TPTGGSSGEFSAMGESLTEQCRVEVKGLRVMNFFSWRRNNDGIRGISI 160
Score = 119 bits (297), Expect(4) = e-105
Identities = 70/136 (51%), Positives = 77/136 (56%)
Frame = -2
Query: 637 VSRLGSTFARMKLKGIDGGPHKRWSMWFNSMQSEEPYQGLTCRESS*KRGVPSGTRIQVV 458
+SRLGSTFARMKLKGIDGGPHKRW + + +E S +G
Sbjct: 218 ISRLGSTFARMKLKGIDGGPHKRWRL---------DMPRILLKERSAFGNADTG------ 262
Query: 457 HGCRQLVP*GVGLSPATSATLVFSCHR*VWNPEQTAGDKPEEGEDDVKSSCPLCPGRHTC 278
G LS A + W TAGDKPEEGEDDVKSSCPLCPGRHTC
Sbjct: 263 ---------GAWLSSARAVRC--------W----TAGDKPEEGEDDVKSSCPLCPGRHTC 301
Query: 277 YNGRDKGSRSREGELT 230
YNGRDKGSR REG+ T
Sbjct: 302 YNGRDKGSRPREGDHT 317
Score = 114 bits (285), Expect(4) = e-105
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = -3
Query: 915 VRRQIPGLNPGQAVETAKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 745
VRRQIPGLNPGQ V+T KLEYGRGRGNFRWSGEMRRDRKEHQ RKHSAGPTLTLRDE
Sbjct: 161 VRRQIPGLNPGQVVKTTKLEYGRGRGNFRWSGEMRRDRKEHQWRKHSAGPTLTLRDE 217
Score = 97.8 bits (242), Expect(4) = e-105
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = -1
Query: 149 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEV 15
HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEV
Sbjct: 316 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEV 360
>ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago truncatula]
gi|355521959|gb|AET02413.1| hypothetical protein
MTR_8g040260 [Medicago truncatula]
Length = 241
Score = 162 bits (409), Expect(2) = 4e-69
Identities = 81/108 (75%), Positives = 83/108 (76%)
Frame = +2
Query: 1109 RPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCS 1288
RP HC + S V DHPLGP TDH LGKLLPHQLANQTRAPP ADSSF S
Sbjct: 134 RPFTSTRHCSIRLSRIAENSSLVDDHPLGPTTDHHLGKLLPHQLANQTRAPPWADSSFRS 193
Query: 1289 SAYGVLAAVSSCCSPPKGRFLRVTHPSATGNTTSRPTCMC*ACRQRSS 1432
SAYGVLA VSSCCSPPKG+FLRVTHPSATGNTTSR CMC ACRQRSS
Sbjct: 194 SAYGVLATVSSCCSPPKGKFLRVTHPSATGNTTSRSICMCKACRQRSS 241
Score = 127 bits (320), Expect(2) = 4e-69
Identities = 70/106 (66%), Positives = 73/106 (68%)
Frame = +3
Query: 687 YPSFTARTTGVSNPIRSPSFRLXXXXXXXXXXFAVGVLSDLYAFHRSTGNSLCPYRTPAW 866
YPSFTARTT VSNPIRSPSFRL FA+GV SDLYAFH STGNSL
Sbjct: 38 YPSFTARTTRVSNPIRSPSFRLSVLVSAQQSAFAIGVPSDLYAFHHSTGNSL-------- 89
Query: 867 QFPPPVQG*ALGFDGGLEKPPTDALRPIIPDNACILCLTAAAGTEL 1004
+L FDG L+KPPTDALRPII DNACILCLTAAAGTEL
Sbjct: 90 ---------SLRFDGELKKPPTDALRPIISDNACILCLTAAAGTEL 126
Score = 67.8 bits (164), Expect = 7e-09
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +1
Query: 436 ARADDSHAPPVSAFPKAPLSFKRIRDMSSPGKVLRFASN*TTCSTACAGP 585
ARADD+HAPPVS FPKA LSFKRI MSSPGKVLRF + T +T + P
Sbjct: 2 ARADDNHAPPVSVFPKALLSFKRIHGMSSPGKVLRFYPSFTARTTRVSNP 51
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 243 bits (620), Expect = 9e-62
Identities = 122/127 (96%), Positives = 123/127 (96%)
Frame = +1
Query: 622 SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF 801
SPGGILNALATALHGS RT PSIHRLRLGLLG LIPFAPLAFVSQCQCRPSRVLSPLVFF
Sbjct: 3 SPGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFF 62
Query: 802 PISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 981
PIS HFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL
Sbjct: 63 PISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 122
Query: 982 PRLLAQS 1002
PRLLAQ+
Sbjct: 123 PRLLAQN 129
Score = 119 bits (297), Expect = 3e-24
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = +3
Query: 990 AGTELADAYSPDTVIASSPGKEVHDPQAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSV 1169
A + L + +TVI SSP KEV DP AF+LHAALLRQAFAHCGKFPTAASRRSLGRVSV
Sbjct: 118 ASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSV 177
Query: 1170 PVWLIILSDQLLIIALV 1220
PVWLIILSDQLLIIALV
Sbjct: 178 PVWLIILSDQLLIIALV 194
Score = 73.6 bits (179), Expect = 1e-10
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +1
Query: 1345 VLTRYSPVRHWKHHFPSDLHVLSMPPAFILSQDR 1446
VLTRYSPVRHWKHHFP DLHVLSMPPAFILSQD+
Sbjct: 194 VLTRYSPVRHWKHHFPFDLHVLSMPPAFILSQDQ 227
>ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|355505209|gb|AES86351.1|
Ycf68 protein [Medicago truncatula]
Length = 237
Score = 103 bits (256), Expect(3) = 6e-53
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -1
Query: 149 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 6
HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR
Sbjct: 72 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 119
Score = 89.7 bits (221), Expect(3) = 6e-53
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 355 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELT 230
TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 32 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRPREGDHT 73
Score = 63.9 bits (154), Expect(3) = 6e-53
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -1
Query: 515 MSRILLKERGAFGNADTGGAWLSSARAVRCW 423
M RILLKER AFGNADTGGAWLSSARAVRCW
Sbjct: 1 MPRILLKERSAFGNADTGGAWLSSARAVRCW 31
>ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|355488624|gb|AES69827.1|
Ycf68 protein [Medicago truncatula]
Length = 237
Score = 100 bits (249), Expect(3) = 4e-52
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -1
Query: 149 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 6
+TAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR
Sbjct: 72 NTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 119
Score = 89.7 bits (221), Expect(3) = 4e-52
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 355 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELT 230
TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 32 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRPREGDNT 73
Score = 63.9 bits (154), Expect(3) = 4e-52
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -1
Query: 515 MSRILLKERGAFGNADTGGAWLSSARAVRCW 423
M RILLKER AFGNADTGGAWLSSARAVRCW
Sbjct: 1 MPRILLKERSAFGNADTGGAWLSSARAVRCW 31