BLASTX nr result

ID: Cimicifuga21_contig00000968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000968
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   355   e-131
ref|XP_002269409.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   352   e-130
ref|XP_002283149.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   353   e-130
ref|XP_004134871.1| PREDICTED: 60S ribosomal protein L8-like [Cu...   350   e-129
ref|XP_002327761.1| predicted protein [Populus trichocarpa] gi|1...   350   e-129

>ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
           gi|147864499|emb|CAN80494.1| hypothetical protein
           VITISV_021173 [Vitis vinifera]
          Length = 260

 Score =  355 bits (911), Expect(2) = e-131
 Identities = 170/176 (96%), Positives = 173/176 (98%)
 Frame = -3

Query: 833 GQFVYCGKKANLVVGNVLPLLSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNG 654
           GQFVYCGKKANLVVGNVLPL SIPEGAVVCNVEHHVGDRGV ARASGDY+IV+SHNPDNG
Sbjct: 85  GQFVYCGKKANLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARASGDYSIVVSHNPDNG 144

Query: 653 TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM 474
           TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM
Sbjct: 145 TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM 204

Query: 473 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKQDKA 306
           NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+K DKA
Sbjct: 205 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260



 Score =  140 bits (352), Expect(2) = e-131
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = -2

Query: 1122 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 943
            MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1    MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 942  VTFRHP 925
            VTFRHP
Sbjct: 61   VTFRHP 66


>ref|XP_002269409.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
          Length = 260

 Score =  352 bits (904), Expect(2) = e-130
 Identities = 168/176 (95%), Positives = 172/176 (97%)
 Frame = -3

Query: 833 GQFVYCGKKANLVVGNVLPLLSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNG 654
           GQFVYCGKKA L+VGNVLPL SIPEGAVVCNVEHHVGDRGV ARASGDYAIV+SHNPDNG
Sbjct: 85  GQFVYCGKKATLIVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARASGDYAIVVSHNPDNG 144

Query: 653 TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM 474
           TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHK+RVKRNCWPKVRGVAM
Sbjct: 145 TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAM 204

Query: 473 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKQDKA 306
           NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+K DKA
Sbjct: 205 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260



 Score =  140 bits (352), Expect(2) = e-130
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = -2

Query: 1122 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 943
            MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1    MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 942  VTFRHP 925
            VTFRHP
Sbjct: 61   VTFRHP 66


>ref|XP_002283149.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
          Length = 260

 Score =  353 bits (906), Expect(2) = e-130
 Identities = 167/176 (94%), Positives = 173/176 (98%)
 Frame = -3

Query: 833 GQFVYCGKKANLVVGNVLPLLSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNG 654
           GQFVYCGKKANLVVGNVLP+ SIPEGAVVCNVEHHVGDRGV ARASGDYAIV+SHNPDNG
Sbjct: 85  GQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHVGDRGVFARASGDYAIVVSHNPDNG 144

Query: 653 TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM 474
           TSRIKLPSGAKKI+PSGCRAM+GQVAGGGRTEKPMLKAGNAYHK+RVKRNCWPKVRGVAM
Sbjct: 145 TSRIKLPSGAKKIIPSGCRAMVGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAM 204

Query: 473 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKQDKA 306
           NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+K DKA
Sbjct: 205 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260



 Score =  139 bits (349), Expect(2) = e-130
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 1122 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 943
            MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVT+IIHDPGRGAPLAR
Sbjct: 1    MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAR 60

Query: 942  VTFRHP 925
            VTFRHP
Sbjct: 61   VTFRHP 66


>ref|XP_004134871.1| PREDICTED: 60S ribosomal protein L8-like [Cucumis sativus]
           gi|449491368|ref|XP_004158874.1| PREDICTED: 60S
           ribosomal protein L8-like [Cucumis sativus]
          Length = 260

 Score =  350 bits (897), Expect(2) = e-129
 Identities = 167/176 (94%), Positives = 171/176 (97%)
 Frame = -3

Query: 833 GQFVYCGKKANLVVGNVLPLLSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNG 654
           GQFVYCGKKANLVVGNVLP+ SIPEGAVVCNVEHHVGDRGV AR SGDYAIVISHNPDN 
Sbjct: 85  GQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDND 144

Query: 653 TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM 474
           TSRIKLPSGAKKIVPSGCRAM+GQVAGGGRTEKP+LKAGNAYHKFRVKRNCWPKVRGVAM
Sbjct: 145 TSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAM 204

Query: 473 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKQDKA 306
           NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+K DKA
Sbjct: 205 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA 260



 Score =  138 bits (348), Expect(2) = e-129
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 1122 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 943
            MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1    MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 942  VTFRHP 925
            V+FRHP
Sbjct: 61   VSFRHP 66


>ref|XP_002327761.1| predicted protein [Populus trichocarpa] gi|118484622|gb|ABK94183.1|
           unknown [Populus trichocarpa]
           gi|222836846|gb|EEE75239.1| predicted protein [Populus
           trichocarpa]
          Length = 260

 Score =  350 bits (897), Expect(2) = e-129
 Identities = 167/176 (94%), Positives = 171/176 (97%)
 Frame = -3

Query: 833 GQFVYCGKKANLVVGNVLPLLSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNG 654
           GQFVYCGKKANL+VGNVLPL S+PEGAVVCNVEHHVGDRGV ARASGDYAIVISHNPDN 
Sbjct: 85  GQFVYCGKKANLMVGNVLPLRSVPEGAVVCNVEHHVGDRGVFARASGDYAIVISHNPDND 144

Query: 653 TSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM 474
           T+RIKLPSG+KKIVPSGCR MIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM
Sbjct: 145 TTRIKLPSGSKKIVPSGCRGMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAM 204

Query: 473 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKQDKA 306
           NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASK DKA
Sbjct: 205 NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKADKA 260



 Score =  138 bits (348), Expect(2) = e-129
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 1122 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 943
            MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR
Sbjct: 1    MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 942  VTFRHP 925
            V+FRHP
Sbjct: 61   VSFRHP 66


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