BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000967
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...   164   3e-38
gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]    161   2e-37
gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]   161   3e-37
dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris] gi|29...   160   4e-37
gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]   160   6e-37

>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  164 bits (415), Expect = 3e-38
 Identities = 81/119 (68%), Positives = 103/119 (86%), Gaps = 1/119 (0%)
 Frame = +1

Query: 178 MAFSGKLGSLMRQSLLQNTASNGQFPATSMLNAIRCMST-KLFIGGLSFGTNDDQLREAF 354
           MAF  + G+L+RQS+ QN+AS GQ    ++LN+IRCMS+ KLFIGGLS+GT+D  L++AF
Sbjct: 1   MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAF 60

Query: 355 ASFGDVTEARVIVDRDSGRSRGFGFVNFTSEEHANAALSSMDGQDLDGRNIRVSIANER 531
           +SFGDV EARVI DRD+GRSRGFGFVNFTS++ A++ALS+MDGQ+L+GRNIRVS ANER
Sbjct: 61  SSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANER 119


>gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
          Length = 144

 Score =  161 bits (408), Expect = 2e-37
 Identities = 82/118 (69%), Positives = 96/118 (81%)
 Frame = +1

Query: 178 MAFSGKLGSLMRQSLLQNTASNGQFPATSMLNAIRCMSTKLFIGGLSFGTNDDQLREAFA 357
           MAF  KLG L+RQS+  N  S    P  SML+AIRCMSTKLF+GGLS+GT+D  LR+AFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAIRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 358 SFGDVTEARVIVDRDSGRSRGFGFVNFTSEEHANAALSSMDGQDLDGRNIRVSIANER 531
           +FGDV +ARVIVDRDSGRSRGFGFVNF+ +E AN A+ +MDGQ+L GRNIRVSIA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117


>gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
          Length = 144

 Score =  161 bits (407), Expect = 3e-37
 Identities = 81/118 (68%), Positives = 96/118 (81%)
 Frame = +1

Query: 178 MAFSGKLGSLMRQSLLQNTASNGQFPATSMLNAIRCMSTKLFIGGLSFGTNDDQLREAFA 357
           MAF  KLG L+RQS+  N  S    P  SML+A+RCMSTKLF+GGLS+GT+D  LR+AFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 358 SFGDVTEARVIVDRDSGRSRGFGFVNFTSEEHANAALSSMDGQDLDGRNIRVSIANER 531
           +FGDV +ARVIVDRDSGRSRGFGFVNF+ +E AN A+ +MDGQ+L GRNIRVSIA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQER 117


>dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
           gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich
           protein [Nicotiana tabacum] gi|399931789|gb|AFP57444.1|
           RNA-binding glycine-rich protein [Nicotiana tabacum]
           gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich
           protein [Nicotiana acuminata]
           gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich
           protein [Nicotiana alata] gi|399931809|gb|AFP57454.1|
           RNA-binding glycine-rich protein [Nicotiana sylvestris]
          Length = 144

 Score =  160 bits (405), Expect = 4e-37
 Identities = 81/118 (68%), Positives = 96/118 (81%)
 Frame = +1

Query: 178 MAFSGKLGSLMRQSLLQNTASNGQFPATSMLNAIRCMSTKLFIGGLSFGTNDDQLREAFA 357
           MAF  KLG L+RQS+  N  S    P  SML+A+RCMSTKLF+GGLS+GT+D  LR+AFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 358 SFGDVTEARVIVDRDSGRSRGFGFVNFTSEEHANAALSSMDGQDLDGRNIRVSIANER 531
           +FGDV +ARVIVDRDSGRSRGFGFVNF+ +E AN A+ +MDGQ+L GRNIRVSIA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQER 117


>gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
          Length = 144

 Score =  160 bits (404), Expect = 6e-37
 Identities = 80/118 (67%), Positives = 96/118 (81%)
 Frame = +1

Query: 178 MAFSGKLGSLMRQSLLQNTASNGQFPATSMLNAIRCMSTKLFIGGLSFGTNDDQLREAFA 357
           MAF  KLG L+RQS+  N  S    P  SML+A+RCMSTKLF+GGLS+GT+D  LR+AFA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 358 SFGDVTEARVIVDRDSGRSRGFGFVNFTSEEHANAALSSMDGQDLDGRNIRVSIANER 531
           +FGDV +ARVIVDRDSGRSRGFGFVNF+ +E AN A+ +MDGQ+L GRNIRV+IA ER
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIAQER 117