BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000960
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]          58   8e-16
gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]      54   3e-14
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...    59   4e-14
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]          59   4e-14
gb|ABA95799.2| retrotransposon protein, putative, unclassified, ...    54   9e-14

>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score = 57.8 bits (138), Expect(2) = 8e-16
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +2

Query: 2   DNAKD-VSNEFVSRLNQKGILQQLTCPYTPEQNGVAEKKNRTLMGVVRCLL 151
           DN K+ V+NEF S L+ +GIL Q +CP TP QNGVAEKKNR ++ V R L+
Sbjct: 248 DNGKEYVNNEFGSFLSIEGILHQTSCPDTPPQNGVAEKKNRHILEVARSLM 298



 Score = 50.4 bits (119), Expect(2) = 8e-16
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = +3

Query: 159 MNVPQSYWYFAVLTSTFLLNRTPSRILSGKAPLQLVY 269
           MNVP+  W  AV+T+T+L+NRTPSRIL  KAP ++V+
Sbjct: 301 MNVPKFLWSEAVMTATYLINRTPSRILGMKAPYEMVF 337


>gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1299

 Score = 54.3 bits (129), Expect(2) = 3e-14
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +2

Query: 17  VSNEFVSRLNQKGILQQLTCPYTPEQNGVAEKKNRTLMGVVRCLL 151
           ++NEF S L+ +GIL Q +CP TP QNGVAE+KNR L+   R L+
Sbjct: 458 INNEFSSFLSSEGILHQTSCPDTPPQNGVAERKNRHLLETARSLM 502



 Score = 48.5 bits (114), Expect(2) = 3e-14
 Identities = 20/37 (54%), Positives = 29/37 (78%)
 Frame = +3

Query: 159 MNVPQSYWYFAVLTSTFLLNRTPSRILSGKAPLQLVY 269
           MNVP+  W  AV+T+T+L+NRTPSRIL  K P ++++
Sbjct: 505 MNVPKFLWSEAVMTATYLINRTPSRILGMKTPCEMIF 541


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1133

 Score = 58.5 bits (140), Expect(2) = 4e-14
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +2

Query: 2   DNAKD-VSNEFVSRLNQKGILQQLTCPYTPEQNGVAEKKNRTLMGVVRCLL 151
           DN  + ++NEFVS ++ +GI+ Q TCP TP QNGVAE+KNR L+ V R L+
Sbjct: 366 DNGTEYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLM 416



 Score = 43.9 bits (102), Expect(2) = 4e-14
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 159 MNVPQSYWYFAVLTSTFLLNRTPSRILSGKAPLQLVYPDR 278
           MNVP+  W  AV+T+ +L+NR PSRIL  K+P +L+   R
Sbjct: 419 MNVPKYLWSEAVMTAAYLINRMPSRILGMKSPAELLLGKR 458


>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
          Length = 1045

 Score = 58.5 bits (140), Expect(2) = 4e-14
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +2

Query: 2   DNAKD-VSNEFVSRLNQKGILQQLTCPYTPEQNGVAEKKNRTLMGVVRCLL 151
           DN  + ++NEFVS ++ +GI+ Q TCP TP QNGVAE+KNR L+ V R L+
Sbjct: 535 DNGTEYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLM 585



 Score = 43.9 bits (102), Expect(2) = 4e-14
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 159 MNVPQSYWYFAVLTSTFLLNRTPSRILSGKAPLQLVYPDR 278
           MNVP+  W  AV+T+ +L+NR PSRIL  K+P +L+   R
Sbjct: 588 MNVPKYLWSEAVMTAAYLINRMPSRILGMKSPAELLLGKR 627


>gb|ABA95799.2| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 2156

 Score = 54.3 bits (129), Expect(2) = 9e-14
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +2

Query: 17   VSNEFVSRLNQKGILQQLTCPYTPEQNGVAEKKNRTLMGVVRCLL 151
            ++NEF S L+ +GIL Q +CP TP QNGVAE+KNR L+   R L+
Sbjct: 983  INNEFSSFLSSEGILHQTSCPDTPPQNGVAERKNRHLLETARSLM 1027



 Score = 47.0 bits (110), Expect(2) = 9e-14
 Identities = 19/37 (51%), Positives = 29/37 (78%)
 Frame = +3

Query: 159  MNVPQSYWYFAVLTSTFLLNRTPSRILSGKAPLQLVY 269
            MNVP+  W  AV+T+T+L+NRTPSRIL  + P ++++
Sbjct: 1030 MNVPKFLWSEAVMTATYLINRTPSRILGMQTPCEMIF 1066