BLASTX nr result

ID: Cimicifuga21_contig00000947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00000947
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [G...   256   e-107
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   266   e-107
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   261   e-106
ref|XP_002527352.1| lyase, putative [Ricinus communis] gi|223533...   254   e-105
ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...   258   e-105

>ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [Glycine max]
          Length = 636

 Score =  256 bits (654), Expect(2) = e-107
 Identities = 120/195 (61%), Positives = 143/195 (73%)
 Frame = -2

Query: 585 IMLKGSHGFYTYSIHEHMKGWPAFDLAVTRTTFKLHREMFRYMALDKNRQRRMPLPDDRS 406
           IML+GS GFY+Y I+EH+ GWP FD++ TR TFKL ++ F+YMA+  NRQR MP P+DR 
Sbjct: 114 IMLRGSSGFYSYGIYEHLNGWPDFDISETRITFKLRKDKFQYMAMADNRQRVMPFPEDRL 173

Query: 405 PKRAQVLAYPEAVRLVNPIESEFRGKVDDKYQYSSKAEDIKVHGWISTNPPVGFWQITPS 226
             R Q L YPEAV LVNP +   +G+VDDKYQYS    + +VHGWIS +PPVGFWQITPS
Sbjct: 174 AGRCQTLGYPEAVLLVNPKDPRLKGEVDDKYQYSCVNMNNRVHGWISFSPPVGFWQITPS 233

Query: 225 HEFRSGGPFKQEHTSHNGPTSLTVYISPHYIGPDRTLKFETEEAWKKVFGPVFIYLNSGP 46
            EFRSGGP KQ  TSH GPT+L +++S HY G D   KF   E+WKKVFGPV+IYLNSG 
Sbjct: 234 DEFRSGGPLKQNLTSHVGPTTLAMFLSSHYAGQDLVPKFRGGESWKKVFGPVYIYLNSGA 293

Query: 45  AGTNRQTLWEDADSQ 1
            G N   LWEDA  Q
Sbjct: 294 VGDNPLWLWEDAKIQ 308



 Score =  161 bits (407), Expect(2) = e-107
 Identities = 75/111 (67%), Positives = 85/111 (76%)
 Frame = -1

Query: 922 GDGVQLEIQKNRVVMDNGLVQVTLSSPAGCITGISYNGTDNLLEIREKENNRGYWDLEWN 743
           G GVQL IQ + VVMDNG+VQVTLS+P G +TGI YNG DNLLE+  KE NRGYWDL W+
Sbjct: 3   GPGVQLHIQDHHVVMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNKETNRGYWDLVWS 62

Query: 742 EPGGRGKFDIIHGTKFSVILQNENQVEISFTRTWDSSQNGSLVPLNIDKRF 590
            PG +G FD+I GT F VI+QNE QVE+SF R WD S  G  VPLNIDKRF
Sbjct: 63  APGSKGMFDVIKGTCFKVIVQNEEQVELSFARMWDHSLEGKFVPLNIDKRF 113


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  266 bits (679), Expect(2) = e-107
 Identities = 125/195 (64%), Positives = 149/195 (76%)
 Frame = -2

Query: 585 IMLKGSHGFYTYSIHEHMKGWPAFDLAVTRTTFKLHREMFRYMALDKNRQRRMPLPDDRS 406
           +ML+GS GFY+Y+I EH+K WP F+LA  R  FKL +E F YMA+  NRQR MPLPDDR 
Sbjct: 117 VMLRGSSGFYSYAIFEHLKEWPGFNLAEARIAFKLRKEKFHYMAVADNRQRYMPLPDDRL 176

Query: 405 PKRAQVLAYPEAVRLVNPIESEFRGKVDDKYQYSSKAEDIKVHGWISTNPPVGFWQITPS 226
             R Q LAYPEAV LVNP+ESEF+G++DDKYQYS + +DI+VHGWI  +P VGFWQITPS
Sbjct: 177 SPRGQALAYPEAVLLVNPVESEFKGELDDKYQYSCENKDIRVHGWICMDPSVGFWQITPS 236

Query: 225 HEFRSGGPFKQEHTSHNGPTSLTVYISPHYIGPDRTLKFETEEAWKKVFGPVFIYLNSGP 46
           +EFRSGGP KQ  TSH GPT+L+V++S HY G D   KF   EAWKKVFGPVF+YLNS  
Sbjct: 237 NEFRSGGPVKQNLTSHVGPTTLSVFLSAHYSGEDLVPKFVAGEAWKKVFGPVFMYLNSVL 296

Query: 45  AGTNRQTLWEDADSQ 1
            G +  +LWEDA  Q
Sbjct: 297 VGDDPLSLWEDAKEQ 311



 Score =  148 bits (374), Expect(2) = e-107
 Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
 Frame = -1

Query: 916 GVQLEIQKNRVVMDNGLVQVTLSSPAGCITGISYNGTDNLLEIREKENNRGYWDLEWNEP 737
           GVQL IQ N V++DNG++QVTLS+P G +TGI YNG  NLLE+   E+NRGYWDL W+ P
Sbjct: 5   GVQLNIQDNHVMLDNGILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLVWSTP 64

Query: 736 GGRGK---FDIIHGTKFSVILQNENQVEISFTRTWDSSQNGSLVPLNIDKRF 590
           G  G    FD+I GT F VI++ E QVE+SFTR+WD S  G L+PLNIDKRF
Sbjct: 65  GSTGTTGIFDVIKGTSFKVIVETEEQVELSFTRSWDPSLEGKLIPLNIDKRF 116


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  261 bits (666), Expect(2) = e-106
 Identities = 123/195 (63%), Positives = 147/195 (75%)
 Frame = -2

Query: 585 IMLKGSHGFYTYSIHEHMKGWPAFDLAVTRTTFKLHREMFRYMALDKNRQRRMPLPDDRS 406
           +ML+GS GFY+Y+I+EH++ WPAF+L  TR  FKL ++ F YMA+  NRQR MPLPDDR 
Sbjct: 117 VMLRGSSGFYSYAIYEHLEEWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRL 176

Query: 405 PKRAQVLAYPEAVRLVNPIESEFRGKVDDKYQYSSKAEDIKVHGWISTNPPVGFWQITPS 226
           P + + LAYPEAV LVNPIE E +G+VDDKYQYS   +D +VHGWI  +P VGFW ITPS
Sbjct: 177 PPKGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQVHGWICMDPAVGFWLITPS 236

Query: 225 HEFRSGGPFKQEHTSHNGPTSLTVYISPHYIGPDRTLKFETEEAWKKVFGPVFIYLNSGP 46
           +EFRSGGP KQ  TSH GPT+L V++S HY G D   KF + EAWKKVFGPVFIYLNS  
Sbjct: 237 NEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNSGEAWKKVFGPVFIYLNSPY 296

Query: 45  AGTNRQTLWEDADSQ 1
            GT+   LWEDA  Q
Sbjct: 297 DGTDPLKLWEDAKLQ 311



 Score =  152 bits (383), Expect(2) = e-106
 Identities = 71/112 (63%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
 Frame = -1

Query: 916 GVQLEIQKNRVVMDNGLVQVTLSSPAGCITGISYNGTDNLLEIREKENNRGYWDLEWNEP 737
           GVQL IQ N VVM+NG+++VTLS+P G +TGI YN  DNLLE+   E+NRGYWDL W+ P
Sbjct: 5   GVQLTIQDNHVVMENGILKVTLSNPGGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSP 64

Query: 736 ---GGRGKFDIIHGTKFSVILQNENQVEISFTRTWDSSQNGSLVPLNIDKRF 590
              G  G FD+I GT F V+++NE+QVE+SFTRTWD S+ G LVPLNIDKRF
Sbjct: 65  TSTGTSGTFDVIKGTTFKVVVENEDQVELSFTRTWDVSREGKLVPLNIDKRF 116


>ref|XP_002527352.1| lyase, putative [Ricinus communis] gi|223533271|gb|EEF35024.1|
           lyase, putative [Ricinus communis]
          Length = 633

 Score =  254 bits (649), Expect(2) = e-105
 Identities = 117/195 (60%), Positives = 146/195 (74%)
 Frame = -2

Query: 585 IMLKGSHGFYTYSIHEHMKGWPAFDLAVTRTTFKLHREMFRYMALDKNRQRRMPLPDDRS 406
           I+L+GS GFY+Y+I+EH+  WP F+L  TR TFKL ++ F+YMA+  +RQR MPLPDDR 
Sbjct: 114 ILLRGSSGFYSYAIYEHLPEWPGFELGETRITFKLRKDKFQYMAVANDRQRPMPLPDDRM 173

Query: 405 PKRAQVLAYPEAVRLVNPIESEFRGKVDDKYQYSSKAEDIKVHGWISTNPPVGFWQITPS 226
           P R Q L YPEAV L+NP +   +G+VDDKYQYS + +D +VHGW+  NPPVGFWQITPS
Sbjct: 174 PGRCQTLGYPEAVLLLNPKDPVLKGEVDDKYQYSCENKDNRVHGWMCFNPPVGFWQITPS 233

Query: 225 HEFRSGGPFKQEHTSHNGPTSLTVYISPHYIGPDRTLKFETEEAWKKVFGPVFIYLNSGP 46
           +EFR+GGP KQ  TSH GPT+L ++ S HY G D   +F   E WKKVFGPVFIYLNS P
Sbjct: 234 NEFRTGGPLKQNLTSHVGPTTLAMFHSSHYAGKDLVPRFNPGEHWKKVFGPVFIYLNSVP 293

Query: 45  AGTNRQTLWEDADSQ 1
            G + + LWEDA +Q
Sbjct: 294 PGYDSRFLWEDAKTQ 308



 Score =  156 bits (395), Expect(2) = e-105
 Identities = 71/108 (65%), Positives = 85/108 (78%)
 Frame = -1

Query: 913 VQLEIQKNRVVMDNGLVQVTLSSPAGCITGISYNGTDNLLEIREKENNRGYWDLEWNEPG 734
           V+L IQ   VVM+NG+VQ+TLS P G +TGI Y+G DNLLEI  +E+NRGYWDL WN PG
Sbjct: 6   VRLHIQDRHVVMENGIVQITLSKPEGIVTGIRYSGIDNLLEILNRESNRGYWDLFWNPPG 65

Query: 733 GRGKFDIIHGTKFSVILQNENQVEISFTRTWDSSQNGSLVPLNIDKRF 590
           G+G FD+I GT F VI++NE Q+EISFTR WDSS  G  +PLNIDKRF
Sbjct: 66  GKGIFDVISGTNFRVIVENEEQIEISFTRMWDSSLEGKYIPLNIDKRF 113


>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  258 bits (660), Expect(2) = e-105
 Identities = 122/195 (62%), Positives = 146/195 (74%)
 Frame = -2

Query: 585 IMLKGSHGFYTYSIHEHMKGWPAFDLAVTRTTFKLHREMFRYMALDKNRQRRMPLPDDRS 406
           +ML+GS GFY+Y+I+EH++ WPAF+L  TR  FKL ++ F YMA+  NRQR MPLPDDR 
Sbjct: 117 VMLRGSSGFYSYAIYEHLEDWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRL 176

Query: 405 PKRAQVLAYPEAVRLVNPIESEFRGKVDDKYQYSSKAEDIKVHGWISTNPPVGFWQITPS 226
           P + + LAYPEAV LVNPIE E +G+VDDKYQYS   +D +VHGWI  +P VGFW ITPS
Sbjct: 177 PPKGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQVHGWICMDPAVGFWLITPS 236

Query: 225 HEFRSGGPFKQEHTSHNGPTSLTVYISPHYIGPDRTLKFETEEAWKKVFGPVFIYLNSGP 46
           +EFRSGGP KQ  TSH GPT+L V++S HY G D   KF   EAWKKVFGPVFIYLNS  
Sbjct: 237 NEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFYAGEAWKKVFGPVFIYLNSPY 296

Query: 45  AGTNRQTLWEDADSQ 1
            G++   LWEDA  Q
Sbjct: 297 DGSHPLKLWEDAKLQ 311



 Score =  149 bits (377), Expect(2) = e-105
 Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 3/112 (2%)
 Frame = -1

Query: 916 GVQLEIQKNRVVMDNGLVQVTLSSPAGCITGISYNGTDNLLEIREKENNRGYWDLEWNEP 737
           GVQL IQ N VVM+NG+++VTLS+P G +TGI YN  DNLLE+   E+NRGYWDL W+ P
Sbjct: 5   GVQLTIQDNHVVMENGMLKVTLSNPEGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSP 64

Query: 736 ---GGRGKFDIIHGTKFSVILQNENQVEISFTRTWDSSQNGSLVPLNIDKRF 590
              G  G FD+I GT F V+++NE+QVE+SFTRTWD S  G LVPLNIDKRF
Sbjct: 65  TSTGTSGTFDVIKGTTFKVMVENEDQVELSFTRTWDVSLEGKLVPLNIDKRF 116


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